RNA–Protein interactions for RNA: ENSMUST00000190050.1

Gm28539-201, Transcript of Predicted gene 28539, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Gm28539, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28539-201ENSMUST00000190050 Nfat5Q9WV30 1534 aa17.74■□□□□ 0.43
Gm28539-201ENSMUST00000190050 Iqcf3Q9D498 203 aa17.74■□□□□ 0.43
Gm28539-201ENSMUST00000190050 Apbb1Q9QXJ1 710 aa17.74■□□□□ 0.43
Gm28539-201ENSMUST00000190050 Trpm3Q5F4S9 1721 aa17.74■□□□□ 0.43
Gm28539-201ENSMUST00000190050 Brwd3A2AHJ4 1799 aa17.74■□□□□ 0.43
Gm28539-201ENSMUST00000190050 Slain2Q8CI08 581 aa17.73■□□□□ 0.43
Gm28539-201ENSMUST00000190050 Nckap5lQ6GQX2 1323 aa17.73■□□□□ 0.43
Gm28539-201ENSMUST00000190050 Mcm10Q0VBD2 885 aa17.73■□□□□ 0.43
Gm28539-201ENSMUST00000190050 Parp14Q2EMV9 1817 aa17.73■□□□□ 0.43
Gm28539-201ENSMUST00000190050 Gm21190A0A0G2JGJ6 266 aa17.72■□□□□ 0.43
Gm28539-201ENSMUST00000190050 Gnai1B2RSH2 354 aa17.72■□□□□ 0.43
Gm28539-201ENSMUST00000190050 Gnai3Q9DC51 354 aa17.72■□□□□ 0.43
Gm28539-201ENSMUST00000190050 Cabp2Q9JLK4 216 aa17.72■□□□□ 0.43
Gm28539-201ENSMUST00000190050 Wdr17E9Q271 1322 aa17.72■□□□□ 0.43
Gm28539-201ENSMUST00000190050 Pank1Q8K4K6 548 aa17.71■□□□□ 0.43
Gm28539-201ENSMUST00000190050 Stk31Q99MW1 1018 aa17.71■□□□□ 0.43
Gm28539-201ENSMUST00000190050 Gimap6Q8K349 305 aa17.71■□□□□ 0.43
Gm28539-201ENSMUST00000190050 Cabp4Q8VHC5 271 aa17.71■□□□□ 0.43
Gm28539-201ENSMUST00000190050 Hoxc9P09633 260 aa17.7■□□□□ 0.42
Gm28539-201ENSMUST00000190050 Cdc37l1Q9CZP7 335 aa17.7■□□□□ 0.42
Gm28539-201ENSMUST00000190050 Scn4aQ9ER60 1841 aa17.7■□□□□ 0.42
Gm28539-201ENSMUST00000190050 Slc4a3P16283 1227 aa17.7■□□□□ 0.42
Gm28539-201ENSMUST00000190050 MpripP97434 1024 aa17.7■□□□□ 0.42
Gm28539-201ENSMUST00000190050 Tspyl2Q7TQI8 677 aa17.7■□□□□ 0.42
Gm28539-201ENSMUST00000190050 Sos1Q62245 1319 aa17.69■□□□□ 0.42
Gm28539-201ENSMUST00000190050 TimelessQ9R1X4 1197 aa17.69■□□□□ 0.42
Gm28539-201ENSMUST00000190050 Siglec1Q62230 1695 aa17.69■□□□□ 0.42
Gm28539-201ENSMUST00000190050 Ltbp4Q8K4G1 1666 aa17.69■□□□□ 0.42
Gm28539-201ENSMUST00000190050 Kcna6Q61923 529 aa17.69■□□□□ 0.42
Gm28539-201ENSMUST00000190050 Rapgef3Q8VCC8 918 aa17.69■□□□□ 0.42
Gm28539-201ENSMUST00000190050 Eya1P97767 591 aa17.68■□□□□ 0.42
Gm28539-201ENSMUST00000190050 Vamp4O70480 141 aa17.67■□□□□ 0.42
Gm28539-201ENSMUST00000190050 Adgrb1Q3UHD1 1582 aa17.67■□□□□ 0.42
Gm28539-201ENSMUST00000190050 Smc5Q8CG46 1101 aaKnown RBP17.67■□□□□ 0.42
Gm28539-201ENSMUST00000190050 Rab11fip3Q8CHD8 1047 aa17.66■□□□□ 0.42
Gm28539-201ENSMUST00000190050 Duxf3A0A0N4SV92 674 aa17.65■□□□□ 0.42
Gm28539-201ENSMUST00000190050 Fam71e1A1L3C1 212 aa17.65■□□□□ 0.42
Gm28539-201ENSMUST00000190050 Fyb1O35601 819 aa17.64■□□□□ 0.42
Gm28539-201ENSMUST00000190050 TmpoQ61033 693 aaKnown RBP17.64■□□□□ 0.42
Gm28539-201ENSMUST00000190050 Cavin2Q63918 418 aaKnown RBP17.64■□□□□ 0.42
Gm28539-201ENSMUST00000190050 Kcnh5Q920E3 988 aa17.64■□□□□ 0.42
Gm28539-201ENSMUST00000190050 Ccdc60Q8C4J0 545 aa17.64■□□□□ 0.41
Gm28539-201ENSMUST00000190050 Gli3Q61602 1583 aa17.64■□□□□ 0.41
Gm28539-201ENSMUST00000190050 G3bp1P97855 465 aaKnown RBP17.64■□□□□ 0.41
Gm28539-201ENSMUST00000190050 Ccne1Q61457 408 aa17.63■□□□□ 0.41
Gm28539-201ENSMUST00000190050 Ttll13A4Q9F6 804 aa17.62■□□□□ 0.41
Gm28539-201ENSMUST00000190050 Polr3glQ8R0C0 218 aa17.62■□□□□ 0.41
Gm28539-201ENSMUST00000190050 Trim26Q99PN3 545 aa17.62■□□□□ 0.41
Gm28539-201ENSMUST00000190050 Arfgef2A2A5R2 1792 aa17.62■□□□□ 0.41
Gm28539-201ENSMUST00000190050 Plekhm2Q80TQ5 1018 aa17.61■□□□□ 0.41
Gm28539-201ENSMUST00000190050 Nid2O88322 1403 aa17.61■□□□□ 0.41
Gm28539-201ENSMUST00000190050 Ahnak2E9PYB0 1738 aaKnown RBP17.61■□□□□ 0.41
Gm28539-201ENSMUST00000190050 Farp2Q91VS8 1065 aa17.61■□□□□ 0.41
Gm28539-201ENSMUST00000190050 KarsQ99MN1 595 aaKnown RBP17.61■□□□□ 0.41
Gm28539-201ENSMUST00000190050 Kdm6aO70546 1401 aa17.6■□□□□ 0.41
Gm28539-201ENSMUST00000190050 Myo5bP21271 1818 aa17.59■□□□□ 0.41
Gm28539-201ENSMUST00000190050 Ppp1r3fQ9JIG4 799 aa17.59■□□□□ 0.41
Gm28539-201ENSMUST00000190050 Nsd3Q6P2L6 1439 aa17.59■□□□□ 0.41
Gm28539-201ENSMUST00000190050 Usp16Q99LG0 825 aa17.59■□□□□ 0.41
Gm28539-201ENSMUST00000190050 Evi5lH3BKQ3 813 aa17.58■□□□□ 0.4
Gm28539-201ENSMUST00000190050 MarsQ68FL6 902 aaKnown RBP17.58■□□□□ 0.4
Gm28539-201ENSMUST00000190050 Tmem132eQ6IEE6 982 aa17.58■□□□□ 0.4
Gm28539-201ENSMUST00000190050 Nup153E9Q3G8 1462 aaKnown RBP17.58■□□□□ 0.4
Gm28539-201ENSMUST00000190050 Amigo3Q8C2S7 508 aa17.58■□□□□ 0.4
Gm28539-201ENSMUST00000190050 Rlbp1Q9Z275 317 aa17.58■□□□□ 0.4
Gm28539-201ENSMUST00000190050 Q3UPC7 1272 aa17.57■□□□□ 0.4
Gm28539-201ENSMUST00000190050 Aldh1l1Q8R0Y6 902 aa17.57■□□□□ 0.4
Gm28539-201ENSMUST00000190050 DccP70211 1447 aa17.57■□□□□ 0.4
Gm28539-201ENSMUST00000190050 EspnQ9ET47 871 aa17.57■□□□□ 0.4
Gm28539-201ENSMUST00000190050 Egfem1Q8C088 590 aa17.56■□□□□ 0.4
Gm28539-201ENSMUST00000190050 HypkQ9CR41 129 aa17.56■□□□□ 0.4
Gm28539-201ENSMUST00000190050 Igsf1Q7TQA1 1317 aa17.56■□□□□ 0.4
Gm28539-201ENSMUST00000190050 Plin1Q8CGN5 517 aa17.56■□□□□ 0.4
Gm28539-201ENSMUST00000190050 TatQ8QZR1 454 aa17.56■□□□□ 0.4
Gm28539-201ENSMUST00000190050 TnrQ8BYI9 1358 aa17.56■□□□□ 0.4
Gm28539-201ENSMUST00000190050 Fmnl2A2APV2 1086 aa17.55■□□□□ 0.4
Gm28539-201ENSMUST00000190050 Gsdma3Q5Y4Y6 464 aa17.55■□□□□ 0.4
Gm28539-201ENSMUST00000190050 Maco1Q7TQE6 664 aaKnown RBP17.55■□□□□ 0.4
Gm28539-201ENSMUST00000190050 Chl1P70232 1209 aa17.54■□□□□ 0.4
Gm28539-201ENSMUST00000190050 Hs1bp3Q3TC93 395 aa17.54■□□□□ 0.4
Gm28539-201ENSMUST00000190050 Klhdc4Q921I2 584 aa17.54■□□□□ 0.4
Gm28539-201ENSMUST00000190050 Dnajc10Q9DC23 793 aa17.54■□□□□ 0.4
Gm28539-201ENSMUST00000190050 Atf3Q60765 181 aa17.54■□□□□ 0.4
Gm28539-201ENSMUST00000190050 Bcl9lQ67FY2 1494 aa17.53■□□□□ 0.4
Gm28539-201ENSMUST00000190050 Ecm2Q5FW85 670 aa17.53■□□□□ 0.4
Gm28539-201ENSMUST00000190050 Chmp5Q9D7S9 219 aa17.53■□□□□ 0.4
Gm28539-201ENSMUST00000190050 Pak3Q61036 559 aa17.52■□□□□ 0.4
Gm28539-201ENSMUST00000190050 Amotl1Q9D4H4 968 aa17.52■□□□□ 0.4
Gm28539-201ENSMUST00000190050 Msh6P54276 1358 aaKnown RBP17.52■□□□□ 0.39
Gm28539-201ENSMUST00000190050 Gm6268A2A3U9 297 aa17.52■□□□□ 0.39
Gm28539-201ENSMUST00000190050 Foxp4Q9DBY0 795 aaKnown RBP17.52■□□□□ 0.39
Gm28539-201ENSMUST00000190050 Abca15E9PWH4 1668 aa17.52■□□□□ 0.39
Gm28539-201ENSMUST00000190050 Rtf1A2AQ19 715 aaKnown RBP17.51■□□□□ 0.39
Gm28539-201ENSMUST00000190050 Dzip1Q8BMD2 852 aa17.51■□□□□ 0.39
Gm28539-201ENSMUST00000190050 Ppp1r37Q8BKR5 712 aa17.49■□□□□ 0.39
Gm28539-201ENSMUST00000190050 GnpatP98192 678 aa17.49■□□□□ 0.39
Gm28539-201ENSMUST00000190050 U2surpQ6NV83 1029 aaKnown RBP17.49■□□□□ 0.39
Gm28539-201ENSMUST00000190050 MvpQ9EQK5 861 aa17.49■□□□□ 0.39
Gm28539-201ENSMUST00000190050 Ankrd44B2RXR6 993 aa17.49■□□□□ 0.39
Gm28539-201ENSMUST00000190050 Abcc12Q80WJ6 1366 aa17.49■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 69.9 ms