RNA–Protein interactions for RNA: ENSMUST00000173727.7

Lig3-212, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-212ENSMUST00000173727 Mcm10Q0VBD2 885 aa13.96□□□□□ -0.17
Lig3-212ENSMUST00000173727 NeflP08551 543 aa13.96□□□□□ -0.17
Lig3-212ENSMUST00000173727 GnpatP98192 678 aa13.96□□□□□ -0.17
Lig3-212ENSMUST00000173727 Ksr2Q3UVC0 959 aa13.96□□□□□ -0.17
Lig3-212ENSMUST00000173727 Ncoa4Q5U4H9 625 aa13.96□□□□□ -0.17
Lig3-212ENSMUST00000173727 Plin1Q8CGN5 517 aa13.96□□□□□ -0.17
Lig3-212ENSMUST00000173727 Iqcf3Q9D498 203 aa13.96□□□□□ -0.17
Lig3-212ENSMUST00000173727 Parp14Q2EMV9 1817 aa13.96□□□□□ -0.17
Lig3-212ENSMUST00000173727 Kcnh8P59111 1102 aa13.96□□□□□ -0.18
Lig3-212ENSMUST00000173727 Rad17Q6NXW6 688 aa13.96□□□□□ -0.18
Lig3-212ENSMUST00000173727 Egfem1Q8C088 590 aa13.96□□□□□ -0.18
Lig3-212ENSMUST00000173727 Stk31Q99MW1 1018 aa13.95□□□□□ -0.18
Lig3-212ENSMUST00000173727 Ano8Q6PB70 1060 aa13.95□□□□□ -0.18
Lig3-212ENSMUST00000173727 Cabp2Q9JLK4 216 aa13.94□□□□□ -0.18
Lig3-212ENSMUST00000173727 Hoxc9P09633 260 aa13.94□□□□□ -0.18
Lig3-212ENSMUST00000173727 Polr3glQ8R0C0 218 aa13.94□□□□□ -0.18
Lig3-212ENSMUST00000173727 Apbb1Q9QXJ1 710 aa13.94□□□□□ -0.18
Lig3-212ENSMUST00000173727 TnikP83510 1323 aa13.93□□□□□ -0.18
Lig3-212ENSMUST00000173727 Ccar1Q8CH18 1146 aaKnown RBP13.93□□□□□ -0.18
Lig3-212ENSMUST00000173727 Cyb5rlB1AS42 316 aa13.93□□□□□ -0.18
Lig3-212ENSMUST00000173727 Ccdc27Q3V036 639 aa13.93□□□□□ -0.18
Lig3-212ENSMUST00000173727 TatQ8QZR1 454 aa13.93□□□□□ -0.18
Lig3-212ENSMUST00000173727 Kcnh5Q920E3 988 aa13.92□□□□□ -0.18
Lig3-212ENSMUST00000173727 Atp7bQ64446 1462 aa13.92□□□□□ -0.18
Lig3-212ENSMUST00000173727 PtprvP70289 1705 aa13.92□□□□□ -0.18
Lig3-212ENSMUST00000173727 Ccne1Q61457 408 aa13.92□□□□□ -0.18
Lig3-212ENSMUST00000173727 Amigo3Q8C2S7 508 aa13.92□□□□□ -0.18
Lig3-212ENSMUST00000173727 Trim26Q99PN3 545 aa13.91□□□□□ -0.18
Lig3-212ENSMUST00000173727 Tmem132eQ6IEE6 982 aa13.91□□□□□ -0.18
Lig3-212ENSMUST00000173727 Eya1P97767 591 aa13.9□□□□□ -0.18
Lig3-212ENSMUST00000173727 NudcO35685 332 aaKnown RBP13.9□□□□□ -0.18
Lig3-212ENSMUST00000173727 Ttc21aQ8C0S4 1314 aa13.9□□□□□ -0.18
Lig3-212ENSMUST00000173727 Ankrd50F7BE84 1390 aa13.89□□□□□ -0.19
Lig3-212ENSMUST00000173727 Fmnl2A2APV2 1086 aa13.89□□□□□ -0.19
Lig3-212ENSMUST00000173727 Mbd3Q9Z2D8 285 aaKnown RBP13.89□□□□□ -0.19
Lig3-212ENSMUST00000173727 Nfat5Q9WV30 1534 aa13.89□□□□□ -0.19
Lig3-212ENSMUST00000173727 Rbm25B2RY56 838 aaKnown RBP13.89□□□□□ -0.19
Lig3-212ENSMUST00000173727 Ddx17Q501J6 650 aaKnown RBP13.89□□□□□ -0.19
Lig3-212ENSMUST00000173727 Dzip1Q8BMD2 852 aa13.89□□□□□ -0.19
Lig3-212ENSMUST00000173727 Dixdc1Q80Y83 711 aa13.88□□□□□ -0.19
Lig3-212ENSMUST00000173727 Ptpn23Q6PB44 1692 aa13.88□□□□□ -0.19
Lig3-212ENSMUST00000173727 Dnajc10Q9DC23 793 aa13.88□□□□□ -0.19
Lig3-212ENSMUST00000173727 Gnai1B2RSH2 354 aa13.87□□□□□ -0.19
Lig3-212ENSMUST00000173727 Brinp3Q499E0 766 aa13.87□□□□□ -0.19
Lig3-212ENSMUST00000173727 TmpoQ61033 693 aaKnown RBP13.87□□□□□ -0.19
Lig3-212ENSMUST00000173727 Gnai3Q9DC51 354 aa13.87□□□□□ -0.19
Lig3-212ENSMUST00000173727 Siglec1Q62230 1695 aa13.87□□□□□ -0.19
Lig3-212ENSMUST00000173727 Robo1O89026 1612 aa13.87□□□□□ -0.19
Lig3-212ENSMUST00000173727 Gli3Q61602 1583 aa13.87□□□□□ -0.19
Lig3-212ENSMUST00000173727 CastP51125 788 aa13.87□□□□□ -0.19
Lig3-212ENSMUST00000173727 Cdc37l1Q9CZP7 335 aa13.86□□□□□ -0.19
Lig3-212ENSMUST00000173727 Slit2Q9R1B9 1521 aa13.86□□□□□ -0.19
Lig3-212ENSMUST00000173727 Rab11fip3Q8CHD8 1047 aa13.85□□□□□ -0.19
Lig3-212ENSMUST00000173727 Amer1Q7TS75 1132 aa13.85□□□□□ -0.19
Lig3-212ENSMUST00000173727 Prkrip1Q9CWV6 186 aaKnown RBP13.85□□□□□ -0.19
Lig3-212ENSMUST00000173727 TnrQ8BYI9 1358 aa13.84□□□□□ -0.19
Lig3-212ENSMUST00000173727 DccP70211 1447 aa13.84□□□□□ -0.19
Lig3-212ENSMUST00000173727 HypkQ9CR41 129 aa13.83□□□□□ -0.19
Lig3-212ENSMUST00000173727 Rtf1A2AQ19 715 aaKnown RBP13.83□□□□□ -0.2
Lig3-212ENSMUST00000173727 Trim58Q5NCC9 485 aa13.83□□□□□ -0.2
Lig3-212ENSMUST00000173727 Ccdc171E9Q1U1 1324 aa13.83□□□□□ -0.2
Lig3-212ENSMUST00000173727 Ccdc60Q8C4J0 545 aa13.83□□□□□ -0.2
Lig3-212ENSMUST00000173727 Ipo9Q91YE6 1041 aa13.83□□□□□ -0.2
Lig3-212ENSMUST00000173727 Kdm6aO70546 1401 aa13.82□□□□□ -0.2
Lig3-212ENSMUST00000173727 Gsdma3Q5Y4Y6 464 aa13.82□□□□□ -0.2
Lig3-212ENSMUST00000173727 Tet3Q8BG87 1668 aa13.82□□□□□ -0.2
Lig3-212ENSMUST00000173727 U2surpQ6NV83 1029 aaKnown RBP13.82□□□□□ -0.2
Lig3-212ENSMUST00000173727 Gm21698A0A087WQP8 267 aa13.82□□□□□ -0.2
Lig3-212ENSMUST00000173727 Gm21671G3UY31 267 aa13.82□□□□□ -0.2
Lig3-212ENSMUST00000173727 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.81□□□□□ -0.2
Lig3-212ENSMUST00000173727 Gm6268A2A3U9 297 aa13.81□□□□□ -0.2
Lig3-212ENSMUST00000173727 4933416C03RikQ3V063 378 aa13.81□□□□□ -0.2
Lig3-212ENSMUST00000173727 Pank1Q8K4K6 548 aa13.81□□□□□ -0.2
Lig3-212ENSMUST00000173727 Usp16Q99LG0 825 aa13.81□□□□□ -0.2
Lig3-212ENSMUST00000173727 Senp3Q9EP97 568 aaKnown RBP13.81□□□□□ -0.2
Lig3-212ENSMUST00000173727 ChgaP26339 463 aaKnown RBP13.81□□□□□ -0.2
Lig3-212ENSMUST00000173727 Nol11Q8BJW5 723 aaKnown RBP13.81□□□□□ -0.2
Lig3-212ENSMUST00000173727 Amotl2Q8K371 772 aa13.8□□□□□ -0.2
Lig3-212ENSMUST00000173727 Kif24Q6NWW5 1356 aa13.8□□□□□ -0.2
Lig3-212ENSMUST00000173727 Sos1Q62245 1319 aa13.8□□□□□ -0.2
Lig3-212ENSMUST00000173727 G3bp1P97855 465 aaKnown RBP13.79□□□□□ -0.2
Lig3-212ENSMUST00000173727 Trpm3Q5F4S9 1721 aa13.79□□□□□ -0.2
Lig3-212ENSMUST00000173727 DaxxO35613 739 aa13.79□□□□□ -0.2
Lig3-212ENSMUST00000173727 Gtf3c3Q3TMP1 882 aa13.79□□□□□ -0.2
Lig3-212ENSMUST00000173727 Hsp90aa1P07901 733 aaKnown RBP13.79□□□□□ -0.2
Lig3-212ENSMUST00000173727 Rangap1P46061 589 aaKnown RBP13.78□□□□□ -0.2
Lig3-212ENSMUST00000173727 Arfgef2A2A5R2 1792 aa13.78□□□□□ -0.2
Lig3-212ENSMUST00000173727 Nid2O88322 1403 aa13.78□□□□□ -0.2
Lig3-212ENSMUST00000173727 Klhdc4Q921I2 584 aa13.78□□□□□ -0.2
Lig3-212ENSMUST00000173727 Plcd4Q8K3R3 807 aa13.77□□□□□ -0.2
Lig3-212ENSMUST00000173727 Vamp4O70480 141 aa13.77□□□□□ -0.21
Lig3-212ENSMUST00000173727 Zmym3Q9JLM4 1370 aa13.77□□□□□ -0.21
Lig3-212ENSMUST00000173727 Card10P58660 1021 aa13.77□□□□□ -0.21
Lig3-212ENSMUST00000173727 Cadps2Q8BYR5 1297 aa13.77□□□□□ -0.21
Lig3-212ENSMUST00000173727 Ggnbp2Q5SV77 696 aa13.76□□□□□ -0.21
Lig3-212ENSMUST00000173727 Ahnak2E9PYB0 1738 aaKnown RBP13.76□□□□□ -0.21
Lig3-212ENSMUST00000173727 Snap23O09044 210 aa13.76□□□□□ -0.21
Lig3-212ENSMUST00000173727 Tspyl2Q7TQI8 677 aa13.76□□□□□ -0.21
Lig3-212ENSMUST00000173727 TkfcQ8VC30 578 aa13.76□□□□□ -0.21
Lig3-212ENSMUST00000173727 Amotl1Q9D4H4 968 aa13.76□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms