RNA–Protein interactions for RNA: ENSMUST00000173347.7

Lig3-210, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-210ENSMUST00000173347 Gimap6Q8K349 305 aa13.91□□□□□ -0.18
Lig3-210ENSMUST00000173347 Scn7aB1AYL1 1681 aa13.91□□□□□ -0.18
Lig3-210ENSMUST00000173347 Slc35g1Q8BY79 368 aa13.91□□□□□ -0.18
Lig3-210ENSMUST00000173347 Ccdc60Q8C4J0 545 aa13.91□□□□□ -0.18
Lig3-210ENSMUST00000173347 Slain2Q8CI08 581 aa13.91□□□□□ -0.18
Lig3-210ENSMUST00000173347 Cdc37l1Q9CZP7 335 aa13.91□□□□□ -0.18
Lig3-210ENSMUST00000173347 Sipa1l2Q80TE4 1722 aa13.91□□□□□ -0.18
Lig3-210ENSMUST00000173347 AampJ3QN89 436 aa13.9□□□□□ -0.18
Lig3-210ENSMUST00000173347 Nckap5lQ6GQX2 1323 aa13.9□□□□□ -0.18
Lig3-210ENSMUST00000173347 Fam71e1A1L3C1 212 aa13.9□□□□□ -0.18
Lig3-210ENSMUST00000173347 Evi5lH3BKQ3 813 aa13.89□□□□□ -0.19
Lig3-210ENSMUST00000173347 Ano8Q6PB70 1060 aa13.89□□□□□ -0.19
Lig3-210ENSMUST00000173347 Camta1A2A891 1682 aa13.89□□□□□ -0.19
Lig3-210ENSMUST00000173347 Tspyl2Q7TQI8 677 aa13.89□□□□□ -0.19
Lig3-210ENSMUST00000173347 Bcl11aQ9QYE3 773 aa13.89□□□□□ -0.19
Lig3-210ENSMUST00000173347 TimelessQ9R1X4 1197 aa13.89□□□□□ -0.19
Lig3-210ENSMUST00000173347 Kdm2bQ6P1G2 1309 aa13.88□□□□□ -0.19
Lig3-210ENSMUST00000173347 Wdr17E9Q271 1322 aa13.88□□□□□ -0.19
Lig3-210ENSMUST00000173347 Parp14Q2EMV9 1817 aa13.88□□□□□ -0.19
Lig3-210ENSMUST00000173347 Gm6268A2A3U9 297 aa13.88□□□□□ -0.19
Lig3-210ENSMUST00000173347 G3bp1P97855 465 aaKnown RBP13.88□□□□□ -0.19
Lig3-210ENSMUST00000173347 Ncapd2Q8K2Z4 1392 aa13.87□□□□□ -0.19
Lig3-210ENSMUST00000173347 Ccne1Q61457 408 aa13.87□□□□□ -0.19
Lig3-210ENSMUST00000173347 Sos1Q62245 1319 aa13.87□□□□□ -0.19
Lig3-210ENSMUST00000173347 Hoxc9P09633 260 aa13.87□□□□□ -0.19
Lig3-210ENSMUST00000173347 Ncoa4Q5U4H9 625 aa13.87□□□□□ -0.19
Lig3-210ENSMUST00000173347 TmpoQ61033 693 aaKnown RBP13.87□□□□□ -0.19
Lig3-210ENSMUST00000173347 Rapgef3Q8VCC8 918 aa13.87□□□□□ -0.19
Lig3-210ENSMUST00000173347 Eya1P97767 591 aa13.86□□□□□ -0.19
Lig3-210ENSMUST00000173347 Rab11fip3Q8CHD8 1047 aa13.86□□□□□ -0.19
Lig3-210ENSMUST00000173347 Znf521Q6KAS7 1311 aa13.86□□□□□ -0.19
Lig3-210ENSMUST00000173347 TatQ8QZR1 454 aa13.86□□□□□ -0.19
Lig3-210ENSMUST00000173347 Zmym3Q9JLM4 1370 aa13.86□□□□□ -0.19
Lig3-210ENSMUST00000173347 U2surpQ6NV83 1029 aaKnown RBP13.85□□□□□ -0.19
Lig3-210ENSMUST00000173347 Kcnh5Q920E3 988 aa13.85□□□□□ -0.19
Lig3-210ENSMUST00000173347 Atf3Q60765 181 aa13.85□□□□□ -0.19
Lig3-210ENSMUST00000173347 Usp16Q99LG0 825 aa13.85□□□□□ -0.19
Lig3-210ENSMUST00000173347 Rtf1A2AQ19 715 aaKnown RBP13.84□□□□□ -0.19
Lig3-210ENSMUST00000173347 Farp2Q91VS8 1065 aa13.84□□□□□ -0.19
Lig3-210ENSMUST00000173347 Rangap1P46061 589 aaKnown RBP13.84□□□□□ -0.19
Lig3-210ENSMUST00000173347 Kcna6Q61923 529 aa13.84□□□□□ -0.19
Lig3-210ENSMUST00000173347 Liat1Q810M6 228 aa13.84□□□□□ -0.19
Lig3-210ENSMUST00000173347 Chmp5Q9D7S9 219 aa13.83□□□□□ -0.19
Lig3-210ENSMUST00000173347 Slit2Q9R1B9 1521 aa13.83□□□□□ -0.2
Lig3-210ENSMUST00000173347 Tmem132eQ6IEE6 982 aa13.83□□□□□ -0.2
Lig3-210ENSMUST00000173347 Pip4k2bQ80XI4 416 aa13.83□□□□□ -0.2
Lig3-210ENSMUST00000173347 Ptpn23Q6PB44 1692 aa13.83□□□□□ -0.2
Lig3-210ENSMUST00000173347 Vamp4O70480 141 aa13.82□□□□□ -0.2
Lig3-210ENSMUST00000173347 Tmco5bQ80X59 307 aa13.82□□□□□ -0.2
Lig3-210ENSMUST00000173347 HypkQ9CR41 129 aa13.82□□□□□ -0.2
Lig3-210ENSMUST00000173347 Fmnl2A2APV2 1086 aa13.82□□□□□ -0.2
Lig3-210ENSMUST00000173347 PtprvP70289 1705 aa13.82□□□□□ -0.2
Lig3-210ENSMUST00000173347 Smc5Q8CG46 1101 aaKnown RBP13.82□□□□□ -0.2
Lig3-210ENSMUST00000173347 EspnQ9ET47 871 aa13.82□□□□□ -0.2
Lig3-210ENSMUST00000173347 Ttll13A4Q9F6 804 aa13.81□□□□□ -0.2
Lig3-210ENSMUST00000173347 Plekhm2Q80TQ5 1018 aa13.81□□□□□ -0.2
Lig3-210ENSMUST00000173347 Gsdma3Q5Y4Y6 464 aa13.81□□□□□ -0.2
Lig3-210ENSMUST00000173347 Senp3Q9EP97 568 aaKnown RBP13.81□□□□□ -0.2
Lig3-210ENSMUST00000173347 Duxf3A0A0N4SV92 674 aa13.81□□□□□ -0.2
Lig3-210ENSMUST00000173347 B4galnt3Q6L8S8 986 aa13.81□□□□□ -0.2
Lig3-210ENSMUST00000173347 GnpatP98192 678 aa13.8□□□□□ -0.2
Lig3-210ENSMUST00000173347 Scn4aQ9ER60 1841 aa13.8□□□□□ -0.2
Lig3-210ENSMUST00000173347 Znf330Q922H9 316 aa13.8□□□□□ -0.2
Lig3-210ENSMUST00000173347 Brwd3A2AHJ4 1799 aa13.8□□□□□ -0.2
Lig3-210ENSMUST00000173347 Col18a1P39061 1774 aa13.79□□□□□ -0.2
Lig3-210ENSMUST00000173347 Klhdc4Q921I2 584 aa13.79□□□□□ -0.2
Lig3-210ENSMUST00000173347 Nsd3Q6P2L6 1439 aa13.79□□□□□ -0.2
Lig3-210ENSMUST00000173347 Wnk3Q80XP9 1757 aa13.78□□□□□ -0.2
Lig3-210ENSMUST00000173347 Cavin2Q63918 418 aaKnown RBP13.78□□□□□ -0.2
Lig3-210ENSMUST00000173347 KarsQ99MN1 595 aaKnown RBP13.78□□□□□ -0.2
Lig3-210ENSMUST00000173347 Nfat5Q9WV30 1534 aa13.78□□□□□ -0.2
Lig3-210ENSMUST00000173347 Nectin2P32507 530 aa13.78□□□□□ -0.2
Lig3-210ENSMUST00000173347 Maco1Q7TQE6 664 aaKnown RBP13.78□□□□□ -0.2
Lig3-210ENSMUST00000173347 Aldh1l1Q8R0Y6 902 aa13.78□□□□□ -0.2
Lig3-210ENSMUST00000173347 Dnajc10Q9DC23 793 aa13.78□□□□□ -0.2
Lig3-210ENSMUST00000173347 Dbr1Q923B1 550 aa13.78□□□□□ -0.2
Lig3-210ENSMUST00000173347 Kdm6aO70546 1401 aa13.77□□□□□ -0.2
Lig3-210ENSMUST00000173347 1700019A02RikA0A087WPV9 146 aa13.77□□□□□ -0.2
Lig3-210ENSMUST00000173347 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.77□□□□□ -0.21
Lig3-210ENSMUST00000173347 Dzip1Q8BMD2 852 aa13.77□□□□□ -0.21
Lig3-210ENSMUST00000173347 Ppp1r3fQ9JIG4 799 aa13.77□□□□□ -0.21
Lig3-210ENSMUST00000173347 Ggnbp2Q5SV77 696 aa13.76□□□□□ -0.21
Lig3-210ENSMUST00000173347 Q3UPC7 1272 aa13.76□□□□□ -0.21
Lig3-210ENSMUST00000173347 Chmp4bQ9D8B3 224 aaKnown RBP13.76□□□□□ -0.21
Lig3-210ENSMUST00000173347 Dixdc1Q80Y83 711 aa13.76□□□□□ -0.21
Lig3-210ENSMUST00000173347 Trpm3Q5F4S9 1721 aa13.75□□□□□ -0.21
Lig3-210ENSMUST00000173347 Pak3Q61036 559 aa13.75□□□□□ -0.21
Lig3-210ENSMUST00000173347 Robo1O89026 1612 aa13.75□□□□□ -0.21
Lig3-210ENSMUST00000173347 Pibf1E9Q6K3 756 aa13.74□□□□□ -0.21
Lig3-210ENSMUST00000173347 Rlbp1Q9Z275 317 aa13.74□□□□□ -0.21
Lig3-210ENSMUST00000173347 TnrQ8BYI9 1358 aa13.74□□□□□ -0.21
Lig3-210ENSMUST00000173347 Nutm1Q8BHP2 1126 aa13.74□□□□□ -0.21
Lig3-210ENSMUST00000173347 Amotl2Q8K371 772 aa13.74□□□□□ -0.21
Lig3-210ENSMUST00000173347 Amotl1Q9D4H4 968 aa13.73□□□□□ -0.21
Lig3-210ENSMUST00000173347 Siglec1Q62230 1695 aa13.73□□□□□ -0.21
Lig3-210ENSMUST00000173347 Snap23O09044 210 aa13.72□□□□□ -0.21
Lig3-210ENSMUST00000173347 Prim1P20664 417 aa13.72□□□□□ -0.21
Lig3-210ENSMUST00000173347 Armcx1Q9CX83 456 aa13.72□□□□□ -0.21
Lig3-210ENSMUST00000173347 Nol11Q8BJW5 723 aaKnown RBP13.72□□□□□ -0.21
Lig3-210ENSMUST00000173347 MvpQ9EQK5 861 aa13.72□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms