RNA–Protein interactions for RNA: ENSMUST00000173243.7

Ccdc28a-203, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 5 BASIC

Gene Ccdc28a, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-203ENSMUST00000173243 CrklP47941 303 aa16.67■□□□□ 0.26
Ccdc28a-203ENSMUST00000173243 Vps33bP59016 617 aa16.67■□□□□ 0.26
Ccdc28a-203ENSMUST00000173243 Ly75Q60767 1723 aa16.67■□□□□ 0.26
Ccdc28a-203ENSMUST00000173243 Plekhd1B2RPU2 505 aa16.66■□□□□ 0.26
Ccdc28a-203ENSMUST00000173243 Nwd2Q6P5U7 1742 aa16.66■□□□□ 0.26
Ccdc28a-203ENSMUST00000173243 Mst1rQ62190 1378 aa16.65■□□□□ 0.26
Ccdc28a-203ENSMUST00000173243 OptnQ8K3K8 584 aa16.65■□□□□ 0.26
Ccdc28a-203ENSMUST00000173243 Tmem132eQ6IEE6 982 aa16.64■□□□□ 0.25
Ccdc28a-203ENSMUST00000173243 TkfcQ8VC30 578 aa16.64■□□□□ 0.25
Ccdc28a-203ENSMUST00000173243 Cald1E9QA15 768 aaKnown RBP16.62■□□□□ 0.25
Ccdc28a-203ENSMUST00000173243 Uhrf1bp1lA2RSJ4 1457 aa16.61■□□□□ 0.25
Ccdc28a-203ENSMUST00000173243 MpndQ3TV65 487 aa16.61■□□□□ 0.25
Ccdc28a-203ENSMUST00000173243 Trim28Q62318 834 aa16.61■□□□□ 0.25
Ccdc28a-203ENSMUST00000173243 Ginm1Q91WR6 327 aa16.61■□□□□ 0.25
Ccdc28a-203ENSMUST00000173243 Rgs17Q9QZB0 210 aa16.61■□□□□ 0.25
Ccdc28a-203ENSMUST00000173243 4930523C07RikE9Q2T4 99 aa16.59■□□□□ 0.25
Ccdc28a-203ENSMUST00000173243 Zpr1Q62384 459 aa16.59■□□□□ 0.25
Ccdc28a-203ENSMUST00000173243 Ppp6r1Q7TSI3 856 aa16.59■□□□□ 0.25
Ccdc28a-203ENSMUST00000173243 Col15a1O35206 1367 aa16.59■□□□□ 0.25
Ccdc28a-203ENSMUST00000173243 Ccne1Q61457 408 aa16.58■□□□□ 0.24
Ccdc28a-203ENSMUST00000173243 Ankrd23Q812A3 306 aa16.58■□□□□ 0.24
Ccdc28a-203ENSMUST00000173243 Taok3Q8BYC6 898 aa16.58■□□□□ 0.24
Ccdc28a-203ENSMUST00000173243 Kdm6aO70546 1401 aa16.58■□□□□ 0.24
Ccdc28a-203ENSMUST00000173243 Parp14Q2EMV9 1817 aa16.57■□□□□ 0.24
Ccdc28a-203ENSMUST00000173243 Adgrb1Q3UHD1 1582 aa16.57■□□□□ 0.24
Ccdc28a-203ENSMUST00000173243 PnisrA2AJT4 805 aaKnown RBP16.57■□□□□ 0.24
Ccdc28a-203ENSMUST00000173243 Zfp777B9EKF4 885 aa16.57■□□□□ 0.24
Ccdc28a-203ENSMUST00000173243 Ppp1r15aP17564 657 aa16.57■□□□□ 0.24
Ccdc28a-203ENSMUST00000173243 Pak3Q61036 559 aa16.57■□□□□ 0.24
Ccdc28a-203ENSMUST00000173243 Simc1E9Q6E9 1354 aa16.56■□□□□ 0.24
Ccdc28a-203ENSMUST00000173243 Aebp2Q9Z248 504 aaKnown RBP16.56■□□□□ 0.24
Ccdc28a-203ENSMUST00000173243 Ccdc6D3YZP9 469 aa16.55■□□□□ 0.24
Ccdc28a-203ENSMUST00000173243 Kcnh4A2A5F7 1018 aa16.54■□□□□ 0.24
Ccdc28a-203ENSMUST00000173243 Kiaa0319Q5SZV5 1081 aa16.53■□□□□ 0.24
Ccdc28a-203ENSMUST00000173243 Zranb3Q6NZP1 1069 aa16.53■□□□□ 0.24
Ccdc28a-203ENSMUST00000173243 Arfgef2A2A5R2 1792 aa16.52■□□□□ 0.24
Ccdc28a-203ENSMUST00000173243 Eif4a2P10630 407 aa16.52■□□□□ 0.24
Ccdc28a-203ENSMUST00000173243 Ddb1Q3U1J4 1140 aaKnown RBP16.52■□□□□ 0.24
Ccdc28a-203ENSMUST00000173243 Sik1Q60670 779 aa16.52■□□□□ 0.24
Ccdc28a-203ENSMUST00000173243 Cypt1Q8CH20 168 aa16.52■□□□□ 0.24
Ccdc28a-203ENSMUST00000173243 Cc2d1aQ8K1A6 943 aa16.52■□□□□ 0.24
Ccdc28a-203ENSMUST00000173243 Rab3gap2Q8BMG7 1366 aa16.51■□□□□ 0.23
Ccdc28a-203ENSMUST00000173243 Adamtsl1Q8BLI0 1745 aa16.5■□□□□ 0.23
Ccdc28a-203ENSMUST00000173243 Eya1P97767 591 aa16.5■□□□□ 0.23
Ccdc28a-203ENSMUST00000173243 Exoc5Q3TPX4 708 aa16.5■□□□□ 0.23
Ccdc28a-203ENSMUST00000173243 Rsph6aQ8CDR2 708 aa16.5■□□□□ 0.23
Ccdc28a-203ENSMUST00000173243 Ahnak2E9PYB0 1738 aaKnown RBP16.49■□□□□ 0.23
Ccdc28a-203ENSMUST00000173243 Gm10471E9Q1C7 252 aa16.49■□□□□ 0.23
Ccdc28a-203ENSMUST00000173243 Ppp1r37Q8BKR5 712 aa16.49■□□□□ 0.23
Ccdc28a-203ENSMUST00000173243 Sugp2Q8CH09 1067 aa16.49■□□□□ 0.23
Ccdc28a-203ENSMUST00000173243 Zcrb1Q9CZ96 217 aaKnown RBP16.49■□□□□ 0.23
Ccdc28a-203ENSMUST00000173243 Ppp2r1aQ76MZ3 589 aa16.48■□□□□ 0.23
Ccdc28a-203ENSMUST00000173243 Spef2Q8C9J3 1734 aa16.47■□□□□ 0.23
Ccdc28a-203ENSMUST00000173243 4930572O03RikQ8C5Y0 211 aa16.46■□□□□ 0.23
Ccdc28a-203ENSMUST00000173243 Elp1Q7TT37 1333 aaKnown RBP16.45■□□□□ 0.22
Ccdc28a-203ENSMUST00000173243 Wdr66E9Q743 1299 aa16.45■□□□□ 0.22
Ccdc28a-203ENSMUST00000173243 ThemisQ8BGW0 636 aa16.45■□□□□ 0.22
Ccdc28a-203ENSMUST00000173243 Slc12a5Q91V14 1138 aa16.45■□□□□ 0.22
Ccdc28a-203ENSMUST00000173243 Nsd3Q6P2L6 1439 aa16.45■□□□□ 0.22
Ccdc28a-203ENSMUST00000173243 Anp32bQ9EST5 272 aaKnown RBP16.44■□□□□ 0.22
Ccdc28a-203ENSMUST00000173243 P2rx7Q9Z1M0 595 aa16.44■□□□□ 0.22
Ccdc28a-203ENSMUST00000173243 GakQ99KY4 1305 aa16.44■□□□□ 0.22
Ccdc28a-203ENSMUST00000173243 Gsdma3Q5Y4Y6 464 aa16.42■□□□□ 0.22
Ccdc28a-203ENSMUST00000173243 Lrit1Q8K099 624 aa16.42■□□□□ 0.22
Ccdc28a-203ENSMUST00000173243 PappaQ8R4K8 1624 aa16.41■□□□□ 0.22
Ccdc28a-203ENSMUST00000173243 GalcP54818 684 aa16.4■□□□□ 0.22
Ccdc28a-203ENSMUST00000173243 Aplp2Q06335 707 aa16.4■□□□□ 0.22
Ccdc28a-203ENSMUST00000173243 Rab11fip3Q8CHD8 1047 aa16.4■□□□□ 0.22
Ccdc28a-203ENSMUST00000173243 Fam50bQ9WTJ8 334 aa16.4■□□□□ 0.22
Ccdc28a-203ENSMUST00000173243 Tns2Q8CGB6 1400 aa16.39■□□□□ 0.21
Ccdc28a-203ENSMUST00000173243 Gm21680A0A0G2JGR8 267 aa16.39■□□□□ 0.21
Ccdc28a-203ENSMUST00000173243 Ppfibp2O35711 882 aa16.39■□□□□ 0.21
Ccdc28a-203ENSMUST00000173243 MpripP97434 1024 aa16.39■□□□□ 0.21
Ccdc28a-203ENSMUST00000173243 Apba2P98084 750 aa16.39■□□□□ 0.21
Ccdc28a-203ENSMUST00000173243 Afg3l2Q8JZQ2 802 aaKnown RBP16.38■□□□□ 0.21
Ccdc28a-203ENSMUST00000173243 Nlrp6Q91WS2 869 aa16.38■□□□□ 0.21
Ccdc28a-203ENSMUST00000173243 Speer4bQ9D9F7 267 aa16.38■□□□□ 0.21
Ccdc28a-203ENSMUST00000173243 Mapk8ip2Q9ERE9 830 aa16.38■□□□□ 0.21
Ccdc28a-203ENSMUST00000173243 Hmgb2P30681 210 aaKnown RBP16.37■□□□□ 0.21
Ccdc28a-203ENSMUST00000173243 Vars2Q3U2A8 1060 aa16.37■□□□□ 0.21
Ccdc28a-203ENSMUST00000173243 OscarQ8VBT3 265 aa16.37■□□□□ 0.21
Ccdc28a-203ENSMUST00000173243 HypkQ9CR41 129 aa16.37■□□□□ 0.21
Ccdc28a-203ENSMUST00000173243 Eif3bQ8JZQ9 803 aaKnown RBP16.36■□□□□ 0.21
Ccdc28a-203ENSMUST00000173243 Amotl1Q9D4H4 968 aa16.36■□□□□ 0.21
Ccdc28a-203ENSMUST00000173243 GsdmaQ9EST1 446 aa16.36■□□□□ 0.21
Ccdc28a-203ENSMUST00000173243 Tsen2Q6P7W5 460 aa16.35■□□□□ 0.21
Ccdc28a-203ENSMUST00000173243 PalmQ9Z0P4 383 aa16.35■□□□□ 0.21
Ccdc28a-203ENSMUST00000173243 Abca3Q8R420 1704 aa16.35■□□□□ 0.21
Ccdc28a-203ENSMUST00000173243 Sos2Q02384 1333 aa16.35■□□□□ 0.21
Ccdc28a-203ENSMUST00000173243 Arhgap33Q80YF9 1305 aa16.35■□□□□ 0.21
Ccdc28a-203ENSMUST00000173243 Pnpla7A2AJ88 1352 aa16.35■□□□□ 0.21
Ccdc28a-203ENSMUST00000173243 VirmaA2AIV2 1811 aaKnown RBP16.34■□□□□ 0.21
Ccdc28a-203ENSMUST00000173243 Ubap1lG3UW59 384 aa16.34■□□□□ 0.21
Ccdc28a-203ENSMUST00000173243 Rps6ka4Q9Z2B9 773 aa16.34■□□□□ 0.21
Ccdc28a-203ENSMUST00000173243 Ssfa2Q922B9 1252 aa16.33■□□□□ 0.2
Ccdc28a-203ENSMUST00000173243 Atf7ipQ7TT18 1306 aa16.33■□□□□ 0.2
Ccdc28a-203ENSMUST00000173243 Trpm3Q5F4S9 1721 aa16.33■□□□□ 0.2
Ccdc28a-203ENSMUST00000173243 TnikP83510 1323 aa16.32■□□□□ 0.2
Ccdc28a-203ENSMUST00000173243 Fchsd2Q3USJ8 740 aa16.32■□□□□ 0.2
Ccdc28a-203ENSMUST00000173243 Kiaa1107Q80TK0 1369 aa16.31■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms