RNA–Protein interactions for RNA: ENSMUST00000138559.8

Ube4a-204, Transcript of Ubiquitin conjugation factor E4 A, mousemouse

TSL 1 (best) BASIC

Gene Ube4a, Length 3,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4a-204ENSMUST00000138559 Rtl5Q5DTT4 599 aa9.95□□□□□ -0.82
Ube4a-204ENSMUST00000138559 Ccne1Q61457 408 aa9.95□□□□□ -0.82
Ube4a-204ENSMUST00000138559 Slit2Q9R1B9 1521 aa9.95□□□□□ -0.82
Ube4a-204ENSMUST00000138559 Kdm6aO70546 1401 aa9.94□□□□□ -0.82
Ube4a-204ENSMUST00000138559 Spef2Q8C9J3 1734 aa9.94□□□□□ -0.82
Ube4a-204ENSMUST00000138559 Nyap1Q6PFX7 833 aa9.94□□□□□ -0.82
Ube4a-204ENSMUST00000138559 PalmQ9Z0P4 383 aa9.94□□□□□ -0.82
Ube4a-204ENSMUST00000138559 Nhsl1Q8CAF4 1587 aa9.93□□□□□ -0.82
Ube4a-204ENSMUST00000138559 Slx1bQ8BX32 270 aa9.92□□□□□ -0.82
Ube4a-204ENSMUST00000138559 Emilin2Q8K482 1074 aa9.92□□□□□ -0.82
Ube4a-204ENSMUST00000138559 TkfcQ8VC30 578 aa9.92□□□□□ -0.82
Ube4a-204ENSMUST00000138559 Golga2Q921M4 999 aa9.92□□□□□ -0.82
Ube4a-204ENSMUST00000138559 Mapk8ip3Q9ESN9 1337 aa9.92□□□□□ -0.82
Ube4a-204ENSMUST00000138559 OptnQ8K3K8 584 aa9.92□□□□□ -0.82
Ube4a-204ENSMUST00000138559 Pard3Q99NH2 1333 aa9.91□□□□□ -0.82
Ube4a-204ENSMUST00000138559 CrklP47941 303 aa9.91□□□□□ -0.82
Ube4a-204ENSMUST00000138559 MpripP97434 1024 aa9.91□□□□□ -0.82
Ube4a-204ENSMUST00000138559 Fchsd2Q3USJ8 740 aa9.91□□□□□ -0.82
Ube4a-204ENSMUST00000138559 Mak16Q8BGS0 296 aaKnown RBP9.91□□□□□ -0.82
Ube4a-204ENSMUST00000138559 Zeb2Q9R0G7 1215 aa9.91□□□□□ -0.82
Ube4a-204ENSMUST00000138559 FocadA2AKG8 1798 aa9.91□□□□□ -0.82
Ube4a-204ENSMUST00000138559 Cntnap1O54991 1385 aa9.91□□□□□ -0.82
Ube4a-204ENSMUST00000138559 Esx1O88933 382 aa9.91□□□□□ -0.82
Ube4a-204ENSMUST00000138559 Plekhd1B2RPU2 505 aa9.91□□□□□ -0.82
Ube4a-204ENSMUST00000138559 Eya1P97767 591 aa9.91□□□□□ -0.82
Ube4a-204ENSMUST00000138559 Map4k4P97820 1233 aaKnown RBP9.91□□□□□ -0.82
Ube4a-204ENSMUST00000138559 Slit1Q80TR4 1531 aa9.9□□□□□ -0.82
Ube4a-204ENSMUST00000138559 Sema6bO54951 886 aa9.9□□□□□ -0.82
Ube4a-204ENSMUST00000138559 Stk31Q99MW1 1018 aa9.89□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Iqcf3Q9D498 203 aa9.89□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Gm10471E9Q1C7 252 aa9.89□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Rab11fip3Q8CHD8 1047 aa9.89□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Gsdma3Q5Y4Y6 464 aa9.88□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Pak3Q61036 559 aa9.88□□□□□ -0.83
Ube4a-204ENSMUST00000138559 RgmbQ7TQ33 436 aa9.88□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Tcerg1Q8CGF7 1100 aaKnown RBP9.88□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Simc1E9Q6E9 1354 aa9.88□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Znf541Q0GGX2 1363 aa9.88□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Kat6bQ8BRB7 1872 aa9.88□□□□□ -0.83
Ube4a-204ENSMUST00000138559 TnikP83510 1323 aa9.88□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Lrp6O88572 1613 aa9.88□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Aplp2Q06335 707 aa9.88□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Zranb3Q6NZP1 1069 aa9.88□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Zpr1Q62384 459 aa9.87□□□□□ -0.83
Ube4a-204ENSMUST00000138559 MypopQ8R4U1 393 aa9.87□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Col15a1O35206 1367 aa9.87□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Usp19Q3UJD6 1360 aa9.87□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Fnbp4Q6ZQ03 1031 aa9.87□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Plin1Q8CGN5 517 aa9.87□□□□□ -0.83
Ube4a-204ENSMUST00000138559 HypkQ9CR41 129 aa9.87□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Apaf1O88879 1249 aa9.86□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Ciz1Q8VEH2 845 aa9.86□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Shank2Q80Z38 1476 aa9.86□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Mcm10Q0VBD2 885 aa9.86□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Arfgef2A2A5R2 1792 aa9.86□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Cavin4A2AMM0 362 aa9.85□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Akap11E9Q777 1895 aa9.85□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Cacna1sQ02789 1880 aa9.85□□□□□ -0.83
Ube4a-204ENSMUST00000138559 InhbeO08717 350 aa9.85□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Sf3b2Q3UJB0 878 aaKnown RBP9.85□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Uspl1Q3ULM6 1089 aa9.85□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Cc2d1aQ8K1A6 943 aa9.84□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Ppp1r37Q8BKR5 712 aa9.84□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Psrc1Q9D0P7 329 aa9.84□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Q4VA45 678 aa9.84□□□□□ -0.83
Ube4a-204ENSMUST00000138559 CrbnQ8C7D2 445 aa9.84□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Trpm3Q5F4S9 1721 aa9.84□□□□□ -0.83
Ube4a-204ENSMUST00000138559 Pm20d1Q8C165 503 aa9.83□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Cabp2Q9JLK4 216 aa9.83□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Tnrc6cQ3UHC0 1690 aaKnown RBP9.83□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Fer1l6E0CZ42 1862 aa9.83□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Uhrf1bp1B2KF50 1429 aa9.83□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Ahnak2E9PYB0 1738 aaKnown RBP9.83□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Adgrb1Q3UHD1 1582 aa9.83□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Dmrt2Q8BG36 561 aa9.83□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Ncbp3Q8BZR9 615 aaKnown RBP9.83□□□□□ -0.84
Ube4a-204ENSMUST00000138559 4930572O03RikQ8C5Y0 211 aa9.83□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Amotl1Q9D4H4 968 aa9.83□□□□□ -0.84
Ube4a-204ENSMUST00000138559 TmpoQ61033 693 aaKnown RBP9.82□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Rad21Q61550 635 aaKnown RBP9.82□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Ofd1Q80Z25 1017 aa9.82□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Larp1bA0A0A6YXJ7 370 aaKnown RBP9.82□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Ralbp1Q62172 648 aa9.82□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Speer4f1Q9D5Q6 258 aa9.82□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Tnks1bp1P58871 1720 aa9.81□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Ccdc129Q14B48 1034 aa9.81□□□□□ -0.84
Ube4a-204ENSMUST00000138559 ThemisQ8BGW0 636 aa9.81□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Eno4Q8C042 619 aa9.81□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Swt1Q9DBQ9 907 aa9.81□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Dusp27Q148W8 1138 aa9.81□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Fbln2P37889 1221 aa9.81□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Rtf1A2AQ19 715 aaKnown RBP9.8□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Ginm1Q91WR6 327 aa9.8□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Fam50bQ9WTJ8 334 aa9.8□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Mst1rQ62190 1378 aa9.8□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Cypt2Q6P924 180 aa9.79□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Mast2Q60592 1734 aa9.79□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Zfp444Q3TDV8 331 aaKnown RBP9.79□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Neurod2Q62414 383 aa9.79□□□□□ -0.84
Ube4a-204ENSMUST00000138559 Speer4bQ9D9F7 267 aa9.79□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms