RNA–Protein interactions for RNA: ENSMUST00000113695.7

Tpm1-211, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 3 BASIC

Gene Tpm1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-211ENSMUST00000113695 Stra8P70278 393 aa27.72■■■□□ 2.03
Tpm1-211ENSMUST00000113695 Rtl5Q5DTT4 599 aa27.71■■■□□ 2.03
Tpm1-211ENSMUST00000113695 Ecm2Q5FW85 670 aa27.71■■■□□ 2.03
Tpm1-211ENSMUST00000113695 PalmQ9Z0P4 383 aa27.7■■■□□ 2.03
Tpm1-211ENSMUST00000113695 Esx1O88933 382 aa27.69■■■□□ 2.02
Tpm1-211ENSMUST00000113695 Map4k4P97820 1233 aaKnown RBP27.69■■■□□ 2.02
Tpm1-211ENSMUST00000113695 Fchsd2Q3USJ8 740 aa27.69■■■□□ 2.02
Tpm1-211ENSMUST00000113695 Spef2Q8C9J3 1734 aa27.69■■■□□ 2.02
Tpm1-211ENSMUST00000113695 Nyap1Q6PFX7 833 aa27.68■■■□□ 2.02
Tpm1-211ENSMUST00000113695 Kdm6aO70546 1401 aa27.67■■■□□ 2.02
Tpm1-211ENSMUST00000113695 Golga2Q921M4 999 aa27.67■■■□□ 2.02
Tpm1-211ENSMUST00000113695 Pard3Q99NH2 1333 aa27.67■■■□□ 2.02
Tpm1-211ENSMUST00000113695 Eya1P97767 591 aa27.67■■■□□ 2.02
Tpm1-211ENSMUST00000113695 TkfcQ8VC30 578 aa27.67■■■□□ 2.02
Tpm1-211ENSMUST00000113695 Mak16Q8BGS0 296 aaKnown RBP27.65■■■□□ 2.02
Tpm1-211ENSMUST00000113695 OptnQ8K3K8 584 aa27.65■■■□□ 2.02
Tpm1-211ENSMUST00000113695 Emilin2Q8K482 1074 aa27.65■■■□□ 2.02
Tpm1-211ENSMUST00000113695 CrklP47941 303 aa27.64■■■□□ 2.02
Tpm1-211ENSMUST00000113695 Cntnap1O54991 1385 aa27.63■■■□□ 2.01
Tpm1-211ENSMUST00000113695 Nhsl1Q8CAF4 1587 aa27.63■■■□□ 2.01
Tpm1-211ENSMUST00000113695 MpripP97434 1024 aa27.63■■■□□ 2.01
Tpm1-211ENSMUST00000113695 Sema6bO54951 886 aa27.62■■■□□ 2.01
Tpm1-211ENSMUST00000113695 Slit1Q80TR4 1531 aa27.62■■■□□ 2.01
Tpm1-211ENSMUST00000113695 Znf541Q0GGX2 1363 aa27.61■■■□□ 2.01
Tpm1-211ENSMUST00000113695 Zeb2Q9R0G7 1215 aa27.61■■■□□ 2.01
Tpm1-211ENSMUST00000113695 Plekhd1B2RPU2 505 aa27.6■■■□□ 2.01
Tpm1-211ENSMUST00000113695 RgmbQ7TQ33 436 aa27.59■■■□□ 2.01
Tpm1-211ENSMUST00000113695 FocadA2AKG8 1798 aa27.59■■■□□ 2.01
Tpm1-211ENSMUST00000113695 Col15a1O35206 1367 aa27.58■■■□□ 2.01
Tpm1-211ENSMUST00000113695 Mapk8ip3Q9ESN9 1337 aa27.58■■■□□ 2.01
Tpm1-211ENSMUST00000113695 Rab11fip3Q8CHD8 1047 aa27.57■■■□□ 2
Tpm1-211ENSMUST00000113695 Fnbp4Q6ZQ03 1031 aa27.56■■■□□ 2
Tpm1-211ENSMUST00000113695 Iqcf3Q9D498 203 aa27.56■■■□□ 2
Tpm1-211ENSMUST00000113695 Simc1E9Q6E9 1354 aa27.55■■■□□ 2
Tpm1-211ENSMUST00000113695 Usp19Q3UJD6 1360 aa27.55■■■□□ 2
Tpm1-211ENSMUST00000113695 Gsdma3Q5Y4Y6 464 aa27.55■■■□□ 2
Tpm1-211ENSMUST00000113695 Tcerg1Q8CGF7 1100 aaKnown RBP27.55■■■□□ 2
Tpm1-211ENSMUST00000113695 Stk31Q99MW1 1018 aa27.55■■■□□ 2
Tpm1-211ENSMUST00000113695 Uspl1Q3ULM6 1089 aa27.54■■■□□ 2
Tpm1-211ENSMUST00000113695 MypopQ8R4U1 393 aa27.54■■■□□ 2
Tpm1-211ENSMUST00000113695 Ciz1Q8VEH2 845 aa27.54■■■□□ 2
Tpm1-211ENSMUST00000113695 TnikP83510 1323 aa27.54■■■□□ 2
Tpm1-211ENSMUST00000113695 Apaf1O88879 1249 aa27.53■■■□□ 2
Tpm1-211ENSMUST00000113695 Q4VA45 678 aa27.52■■■□□ 2
Tpm1-211ENSMUST00000113695 Lrp6O88572 1613 aa27.52■■■□□ 2
Tpm1-211ENSMUST00000113695 Ncbp3Q8BZR9 615 aaKnown RBP27.52■■■□□ 2
Tpm1-211ENSMUST00000113695 HypkQ9CR41 129 aa27.51■■□□□ 1.99
Tpm1-211ENSMUST00000113695 Gm10471E9Q1C7 252 aa27.5■■□□□ 1.99
Tpm1-211ENSMUST00000113695 Mcm10Q0VBD2 885 aa27.5■■□□□ 1.99
Tpm1-211ENSMUST00000113695 Ppp1r37Q8BKR5 712 aa27.5■■□□□ 1.99
Tpm1-211ENSMUST00000113695 Shank2Q80Z38 1476 aa27.5■■□□□ 1.99
Tpm1-211ENSMUST00000113695 Zpr1Q62384 459 aa27.49■■□□□ 1.99
Tpm1-211ENSMUST00000113695 Zranb3Q6NZP1 1069 aa27.49■■□□□ 1.99
Tpm1-211ENSMUST00000113695 Cavin4A2AMM0 362 aa27.49■■□□□ 1.99
Tpm1-211ENSMUST00000113695 Pak3Q61036 559 aa27.49■■□□□ 1.99
Tpm1-211ENSMUST00000113695 InhbeO08717 350 aa27.48■■□□□ 1.99
Tpm1-211ENSMUST00000113695 Plin1Q8CGN5 517 aa27.47■■□□□ 1.99
Tpm1-211ENSMUST00000113695 Psrc1Q9D0P7 329 aa27.44■■□□□ 1.98
Tpm1-211ENSMUST00000113695 Aplp2Q06335 707 aa27.43■■□□□ 1.98
Tpm1-211ENSMUST00000113695 Cypt2Q6P924 180 aa27.43■■□□□ 1.98
Tpm1-211ENSMUST00000113695 CrbnQ8C7D2 445 aa27.43■■□□□ 1.98
Tpm1-211ENSMUST00000113695 Pm20d1Q8C165 503 aa27.42■■□□□ 1.98
Tpm1-211ENSMUST00000113695 Cc2d1aQ8K1A6 943 aa27.42■■□□□ 1.98
Tpm1-211ENSMUST00000113695 Amotl1Q9D4H4 968 aa27.42■■□□□ 1.98
Tpm1-211ENSMUST00000113695 Cabp2Q9JLK4 216 aa27.42■■□□□ 1.98
Tpm1-211ENSMUST00000113695 Uhrf1bp1B2KF50 1429 aa27.42■■□□□ 1.98
Tpm1-211ENSMUST00000113695 TmpoQ61033 693 aaKnown RBP27.41■■□□□ 1.98
Tpm1-211ENSMUST00000113695 Arfgef2A2A5R2 1792 aa27.41■■□□□ 1.98
Tpm1-211ENSMUST00000113695 Kat6bQ8BRB7 1872 aa27.41■■□□□ 1.98
Tpm1-211ENSMUST00000113695 Trpm3Q5F4S9 1721 aa27.41■■□□□ 1.98
Tpm1-211ENSMUST00000113695 ThemisQ8BGW0 636 aa27.41■■□□□ 1.98
Tpm1-211ENSMUST00000113695 Ccdc129Q14B48 1034 aa27.4■■□□□ 1.98
Tpm1-211ENSMUST00000113695 Swt1Q9DBQ9 907 aa27.4■■□□□ 1.98
Tpm1-211ENSMUST00000113695 Sf3b2Q3UJB0 878 aaKnown RBP27.39■■□□□ 1.98
Tpm1-211ENSMUST00000113695 Ralbp1Q62172 648 aa27.39■■□□□ 1.98
Tpm1-211ENSMUST00000113695 Dusp27Q148W8 1138 aa27.38■■□□□ 1.97
Tpm1-211ENSMUST00000113695 Akap11E9Q777 1895 aa27.38■■□□□ 1.97
Tpm1-211ENSMUST00000113695 Adgrb1Q3UHD1 1582 aa27.38■■□□□ 1.97
Tpm1-211ENSMUST00000113695 Ofd1Q80Z25 1017 aa27.38■■□□□ 1.97
Tpm1-211ENSMUST00000113695 4930572O03RikQ8C5Y0 211 aa27.38■■□□□ 1.97
Tpm1-211ENSMUST00000113695 Speer4f1Q9D5Q6 258 aa27.38■■□□□ 1.97
Tpm1-211ENSMUST00000113695 Fer1l6E0CZ42 1862 aa27.37■■□□□ 1.97
Tpm1-211ENSMUST00000113695 Cacna1sQ02789 1880 aa27.36■■□□□ 1.97
Tpm1-211ENSMUST00000113695 Larp1bA0A0A6YXJ7 370 aaKnown RBP27.36■■□□□ 1.97
Tpm1-211ENSMUST00000113695 Eno4Q8C042 619 aa27.36■■□□□ 1.97
Tpm1-211ENSMUST00000113695 Ahnak2E9PYB0 1738 aaKnown RBP27.36■■□□□ 1.97
Tpm1-211ENSMUST00000113695 Tnrc6cQ3UHC0 1690 aaKnown RBP27.35■■□□□ 1.97
Tpm1-211ENSMUST00000113695 Rad21Q61550 635 aaKnown RBP27.34■■□□□ 1.97
Tpm1-211ENSMUST00000113695 Tnks1bp1P58871 1720 aa27.33■■□□□ 1.97
Tpm1-211ENSMUST00000113695 Zfp444Q3TDV8 331 aaKnown RBP27.32■■□□□ 1.96
Tpm1-211ENSMUST00000113695 Ginm1Q91WR6 327 aa27.32■■□□□ 1.96
Tpm1-211ENSMUST00000113695 Mst1rQ62190 1378 aa27.32■■□□□ 1.96
Tpm1-211ENSMUST00000113695 Dmrt2Q8BG36 561 aa27.31■■□□□ 1.96
Tpm1-211ENSMUST00000113695 Fam50bQ9WTJ8 334 aa27.31■■□□□ 1.96
Tpm1-211ENSMUST00000113695 Nup153E9Q3G8 1462 aaKnown RBP27.31■■□□□ 1.96
Tpm1-211ENSMUST00000113695 Vps33bP59016 617 aa27.3■■□□□ 1.96
Tpm1-211ENSMUST00000113695 Rtf1A2AQ19 715 aaKnown RBP27.3■■□□□ 1.96
Tpm1-211ENSMUST00000113695 Anks4bQ8K3X6 423 aa27.29■■□□□ 1.96
Tpm1-211ENSMUST00000113695 Kcnh4A2A5F7 1018 aa27.28■■□□□ 1.96
Tpm1-211ENSMUST00000113695 Tns2Q8CGB6 1400 aa27.27■■□□□ 1.96
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms