RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Prl7d1P04769 244 aa13.19□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Nap1l1P28656 391 aaKnown RBP13.19□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Kif21aQ9QXL2 1672 aa13.19□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Slc52a2Q9D8F3 450 aa13.19□□□□□ -0.3
Scn8a-203ENSMUST00000108908 OvosQ3UU35 1456 aa13.19□□□□□ -0.3
Scn8a-203ENSMUST00000108908 TnikP83510 1323 aa13.19□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Bicdl1A0JNT9 577 aa13.19□□□□□ -0.3
Scn8a-203ENSMUST00000108908 CarsQ9ER72 831 aaKnown RBP13.19□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Igf1rQ60751 1373 aa13.18□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Sel1lQ9Z2G6 790 aa13.18□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Strn4P58404 760 aa13.18□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Acsbg1Q99PU5 721 aa13.18□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Smc2Q8CG48 1191 aaKnown RBP13.18□□□□□ -0.3
Scn8a-203ENSMUST00000108908 NaspQ99MD9 773 aaKnown RBP13.18□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Rapgef4Q9EQZ6 1011 aa13.17□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Trim34aQ99PP6 485 aa13.17□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Cyb5rlB1AS42 316 aa13.17□□□□□ -0.3
Scn8a-203ENSMUST00000108908 AI481877A2ALV5 1481 aa13.17□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Znhit6Q3UFB2 460 aaKnown RBP13.17□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Smarca5Q91ZW3 1051 aaKnown RBP13.17□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Fkbp5Q64378 456 aa13.17□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Ccdc34Q3UI66 367 aa13.17□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Spty2d1Q68FG3 682 aa13.16□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Ankib1Q6ZPS6 1085 aa13.16□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Cfap65Q3V0B4 1847 aa13.16□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Map7d2A2AG50 781 aa13.15□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Gm10563F6WIE4 79 aa13.15□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Gsdma2Q32M21 443 aa13.15□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Cnnm3Q32NY4 713 aa13.15□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Stk38Q91VJ4 465 aa13.15□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Caskin1Q6P9K8 1431 aa13.15□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Mapkbp1Q6NS57 1503 aa13.15□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Ccdc173A0JLY1 547 aa13.15□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Kif20aP97329 887 aa13.15□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Lrrcc1Q69ZB0 1026 aa13.15□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Washc2Q6PGL7 1334 aa13.15□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Zkscan1Q8BGS3 561 aaKnown RBP13.15□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Rrs1Q9CYH6 365 aaKnown RBP13.15□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Prm3Q62100 101 aa13.15□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Fam135aQ6NS59 1506 aa13.15□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Pde4bB1AWC9 736 aa13.15□□□□□ -0.3
Scn8a-203ENSMUST00000108908 EzrP26040 586 aaKnown RBP13.15□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Ipo4Q8VI75 1082 aa13.15□□□□□ -0.3
Scn8a-203ENSMUST00000108908 Ptpdc1Q6NZK8 747 aa13.15□□□□□ -0.31
Scn8a-203ENSMUST00000108908 BC005561E9Q5E2 1589 aa13.14□□□□□ -0.31
Scn8a-203ENSMUST00000108908 MycnP03966 462 aaKnown RBP13.14□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Ccdc96Q9CR92 584 aa13.14□□□□□ -0.31
Scn8a-203ENSMUST00000108908 PdcQ9QW08 244 aa13.14□□□□□ -0.31
Scn8a-203ENSMUST00000108908 EappQ5BU09 281 aa13.14□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Ppp1r15aP17564 657 aa13.14□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Hap1O35668 628 aa13.13□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Dnajc2P54103 621 aaKnown RBP13.13□□□□□ -0.31
Scn8a-203ENSMUST00000108908 GnpatP98192 678 aa13.13□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Ccdc155Q80VJ8 648 aa13.13□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Nlrp3Q8R4B8 1033 aa13.13□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Erc1Q99MI1 1120 aa13.13□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Prpf4bQ61136 1007 aaKnown RBP13.13□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Brf1Q8CFK2 676 aa13.13□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Tfip11Q9ERA6 838 aaKnown RBP13.13□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Rfx7F8VPJ6 1459 aa13.13□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Gigyf1Q99MR1 1044 aaKnown RBP13.13□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Map4k4P97820 1233 aaKnown RBP13.13□□□□□ -0.31
Scn8a-203ENSMUST00000108908 ZgpatQ8VDM1 511 aa13.13□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Rhot2Q8JZN7 620 aa13.12□□□□□ -0.31
Scn8a-203ENSMUST00000108908 IbspQ61711 324 aa13.12□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Dusp9Q7TNL7 452 aa13.12□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Fsd1Q7TPM6 496 aa13.12□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Necab1Q8BG18 352 aa13.12□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Rufy1Q8BIJ7 712 aa13.12□□□□□ -0.31
Scn8a-203ENSMUST00000108908 SelenooQ9DBC0 667 aa13.12□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Prex2Q3LAC4 1598 aa13.12□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Atp10dQ8K2X1 1416 aa13.12□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Mcm10Q0VBD2 885 aa13.12□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Pnmal2G3X9N3 661 aa13.12□□□□□ -0.31
Scn8a-203ENSMUST00000108908 NgdnQ9DB96 315 aaKnown RBP13.12□□□□□ -0.31
Scn8a-203ENSMUST00000108908 HmmrQ00547 794 aaKnown RBP13.12□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Ccne1Q61457 408 aa13.12□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Kcnh5Q920E3 988 aa13.12□□□□□ -0.31
Scn8a-203ENSMUST00000108908 VeztQ3ZK22 780 aa13.11□□□□□ -0.31
Scn8a-203ENSMUST00000108908 TnmdQ9EP64 317 aa13.11□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Zrsr2Q62377 462 aaKnown RBP13.11□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Cfap69Q8BH53 942 aa13.11□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Commd10Q8JZY2 202 aa13.11□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Nup133Q8R0G9 1155 aa13.11□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Aplp1Q03157 653 aa13.11□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Fbxo2Q80UW2 297 aa13.11□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Eif3bQ8JZQ9 803 aaKnown RBP13.11□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Fbln2P37889 1221 aa13.1□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Fsd2Q8BZ52 692 aa13.1□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Zeb2Q9R0G7 1215 aa13.1□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Gm1043A0A140LJC2 1431 aa13.1□□□□□ -0.31
Scn8a-203ENSMUST00000108908 L3mbtl2P59178 703 aa13.1□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Mlh3A0A1Y7VMP7 1443 aa13.1□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Top1mtQ8R4U6 593 aa13.1□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Cpa2Q504N0 417 aa13.09□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Pms1Q8K119 917 aa13.09□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Sptbn5F6UCX4 1208 aa13.09□□□□□ -0.31
Scn8a-203ENSMUST00000108908 GpkowQ56A08 488 aa13.09□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Gpatch8A2A6A1 1505 aa13.09□□□□□ -0.31
Scn8a-203ENSMUST00000108908 Polr3aB2RXC6 1390 aa13.09□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms