RNA–Protein interactions for RNA: ENSMUST00000108661.7

Chd3-202, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Chd3, Length 7,261 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-202ENSMUST00000108661 Cfap99A0A140LIX9 648 aa13.63□□□□□ -0.23
Chd3-202ENSMUST00000108661 Commd10Q8JZY2 202 aa13.62□□□□□ -0.23
Chd3-202ENSMUST00000108661 Mug1P28665 1476 aa13.62□□□□□ -0.23
Chd3-202ENSMUST00000108661 Top2bQ64511 1612 aa13.62□□□□□ -0.23
Chd3-202ENSMUST00000108661 Cep131Q62036 1060 aa13.62□□□□□ -0.23
Chd3-202ENSMUST00000108661 AqrQ8CFQ3 1481 aaKnown RBP13.62□□□□□ -0.23
Chd3-202ENSMUST00000108661 Nup133Q8R0G9 1155 aa13.62□□□□□ -0.23
Chd3-202ENSMUST00000108661 TmpoQ61033 693 aaKnown RBP13.62□□□□□ -0.23
Chd3-202ENSMUST00000108661 Ccdc155Q80VJ8 648 aa13.62□□□□□ -0.23
Chd3-202ENSMUST00000108661 Cep89Q9CZX2 791 aa13.61□□□□□ -0.23
Chd3-202ENSMUST00000108661 Galntl5Q9D4M9 431 aa13.61□□□□□ -0.23
Chd3-202ENSMUST00000108661 Gapvd1Q6PAR5 1458 aa13.61□□□□□ -0.23
Chd3-202ENSMUST00000108661 Ppp2r1aQ76MZ3 589 aa13.61□□□□□ -0.23
Chd3-202ENSMUST00000108661 Riok1Q922Q2 567 aa13.61□□□□□ -0.23
Chd3-202ENSMUST00000108661 Dhx9O70133 1380 aaKnown RBP13.61□□□□□ -0.23
Chd3-202ENSMUST00000108661 Casq1O09165 405 aa13.61□□□□□ -0.23
Chd3-202ENSMUST00000108661 Becn1O88597 448 aa13.61□□□□□ -0.23
Chd3-202ENSMUST00000108661 Rsph6aQ8CDR2 708 aa13.61□□□□□ -0.23
Chd3-202ENSMUST00000108661 Golim4Q8BXA1 655 aa13.6□□□□□ -0.23
Chd3-202ENSMUST00000108661 Rab3gap2Q8BMG7 1366 aa13.6□□□□□ -0.23
Chd3-202ENSMUST00000108661 Ttll12Q3UDE2 639 aa13.6□□□□□ -0.23
Chd3-202ENSMUST00000108661 Kiaa0753Q6A000 959 aa13.6□□□□□ -0.23
Chd3-202ENSMUST00000108661 Kdm4aQ8BW72 1064 aa13.6□□□□□ -0.23
Chd3-202ENSMUST00000108661 Smc2Q8CG48 1191 aaKnown RBP13.6□□□□□ -0.23
Chd3-202ENSMUST00000108661 Rai14Q9EP71 979 aaKnown RBP13.6□□□□□ -0.23
Chd3-202ENSMUST00000108661 Sycp1Q62209 993 aa13.6□□□□□ -0.23
Chd3-202ENSMUST00000108661 BicraF8VPZ9 1578 aa13.6□□□□□ -0.23
Chd3-202ENSMUST00000108661 Rsph3aQ3UFY4 516 aa13.6□□□□□ -0.23
Chd3-202ENSMUST00000108661 Ccne1Q61457 408 aa13.59□□□□□ -0.23
Chd3-202ENSMUST00000108661 Gpatch3Q8BIY1 525 aa13.59□□□□□ -0.23
Chd3-202ENSMUST00000108661 Myo1bP46735 1107 aa13.59□□□□□ -0.23
Chd3-202ENSMUST00000108661 Fbxo2Q80UW2 297 aa13.59□□□□□ -0.23
Chd3-202ENSMUST00000108661 Polr3dQ91WD1 398 aa13.59□□□□□ -0.23
Chd3-202ENSMUST00000108661 Cspp1B2RX88 1205 aa13.59□□□□□ -0.23
Chd3-202ENSMUST00000108661 Spg7Q3ULF4 781 aa13.59□□□□□ -0.23
Chd3-202ENSMUST00000108661 Nphp1Q9QY53 687 aa13.59□□□□□ -0.23
Chd3-202ENSMUST00000108661 Cwc27Q3TKY6 469 aa13.59□□□□□ -0.23
Chd3-202ENSMUST00000108661 Cchcr1Q8K2I2 770 aa13.59□□□□□ -0.23
Chd3-202ENSMUST00000108661 Hnrnpul1Q8VDM6 859 aaKnown RBP13.59□□□□□ -0.23
Chd3-202ENSMUST00000108661 Map7d2A2AG50 781 aa13.59□□□□□ -0.23
Chd3-202ENSMUST00000108661 Qtrt2B8ZXI1 415 aa13.58□□□□□ -0.23
Chd3-202ENSMUST00000108661 Rrs1Q9CYH6 365 aaKnown RBP13.58□□□□□ -0.23
Chd3-202ENSMUST00000108661 Ncapd3Q6ZQK0 1506 aa13.58□□□□□ -0.24
Chd3-202ENSMUST00000108661 InsrP15208 1372 aa13.58□□□□□ -0.24
Chd3-202ENSMUST00000108661 Fchsd2Q3USJ8 740 aa13.58□□□□□ -0.24
Chd3-202ENSMUST00000108661 Tmc1Q8R4P5 757 aa13.58□□□□□ -0.24
Chd3-202ENSMUST00000108661 AampJ3QN89 436 aa13.58□□□□□ -0.24
Chd3-202ENSMUST00000108661 Erich4Q3UNU4 136 aa13.58□□□□□ -0.24
Chd3-202ENSMUST00000108661 Pank1Q8K4K6 548 aa13.58□□□□□ -0.24
Chd3-202ENSMUST00000108661 Ipo9Q91YE6 1041 aa13.57□□□□□ -0.24
Chd3-202ENSMUST00000108661 Znf287Q9EQB9 759 aa13.57□□□□□ -0.24
Chd3-202ENSMUST00000108661 Erc1Q99MI1 1120 aa13.57□□□□□ -0.24
Chd3-202ENSMUST00000108661 AI481877A2ALV5 1481 aa13.57□□□□□ -0.24
Chd3-202ENSMUST00000108661 Kif3aP28741 701 aa13.57□□□□□ -0.24
Chd3-202ENSMUST00000108661 Ddb1Q3U1J4 1140 aaKnown RBP13.57□□□□□ -0.24
Chd3-202ENSMUST00000108661 Zkscan2G3X952 960 aa13.56□□□□□ -0.24
Chd3-202ENSMUST00000108661 Mad1l1Q9WTX8 717 aaKnown RBP13.56□□□□□ -0.24
Chd3-202ENSMUST00000108661 TnikP83510 1323 aa13.56□□□□□ -0.24
Chd3-202ENSMUST00000108661 Kiaa1211Q5PR69 1207 aa13.56□□□□□ -0.24
Chd3-202ENSMUST00000108661 Cdc37l1Q9CZP7 335 aa13.56□□□□□ -0.24
Chd3-202ENSMUST00000108661 Ppip5k1A2ARP1 1436 aa13.56□□□□□ -0.24
Chd3-202ENSMUST00000108661 Ccdc85cE9Q6B2 420 aa13.56□□□□□ -0.24
Chd3-202ENSMUST00000108661 Arid3aQ62431 601 aa13.56□□□□□ -0.24
Chd3-202ENSMUST00000108661 Necab1Q8BG18 352 aa13.55□□□□□ -0.24
Chd3-202ENSMUST00000108661 Igf2bp2Q5SF07 592 aaKnown RBP13.55□□□□□ -0.24
Chd3-202ENSMUST00000108661 Frmpd2A0A140LI67 1392 aa13.55□□□□□ -0.24
Chd3-202ENSMUST00000108661 Slc14a2Q8R4T9 930 aa13.55□□□□□ -0.24
Chd3-202ENSMUST00000108661 Mlh3A0A1Y7VMP7 1443 aa13.55□□□□□ -0.24
Chd3-202ENSMUST00000108661 Rapgef6Q5NCJ1 1609 aa13.55□□□□□ -0.24
Chd3-202ENSMUST00000108661 Sall3Q62255 1320 aa13.55□□□□□ -0.24
Chd3-202ENSMUST00000108661 Plekhg5Q66T02 1073 aa13.55□□□□□ -0.24
Chd3-202ENSMUST00000108661 Idi2Q8BFZ6 227 aa13.55□□□□□ -0.24
Chd3-202ENSMUST00000108661 CastP51125 788 aa13.54□□□□□ -0.24
Chd3-202ENSMUST00000108661 Glg1Q61543 1175 aaKnown RBP13.54□□□□□ -0.24
Chd3-202ENSMUST00000108661 Ano8Q6PB70 1060 aa13.54□□□□□ -0.24
Chd3-202ENSMUST00000108661 Dhx8A2A4P0 1244 aaKnown RBP13.54□□□□□ -0.24
Chd3-202ENSMUST00000108661 Cyp2ab1S4R196 498 aa13.54□□□□□ -0.24
Chd3-202ENSMUST00000108661 Usp48Q3V0C5 1052 aa13.54□□□□□ -0.24
Chd3-202ENSMUST00000108661 Rhot2Q8JZN7 620 aa13.54□□□□□ -0.24
Chd3-202ENSMUST00000108661 Zc3h12cQ5DTV4 884 aa13.54□□□□□ -0.24
Chd3-202ENSMUST00000108661 Krt84Q99M73 603 aa13.54□□□□□ -0.24
Chd3-202ENSMUST00000108661 Rbm27Q5SFM8 1060 aaKnown RBP13.54□□□□□ -0.24
Chd3-202ENSMUST00000108661 Gm7347D3YYI9 267 aa13.53□□□□□ -0.24
Chd3-202ENSMUST00000108661 Speer4aF8VPX6 267 aa13.53□□□□□ -0.24
Chd3-202ENSMUST00000108661 Epb41l3Q9WV92 929 aa13.53□□□□□ -0.24
Chd3-202ENSMUST00000108661 Fancd2Q80V62 1450 aa13.53□□□□□ -0.24
Chd3-202ENSMUST00000108661 Ppp1r15aP17564 657 aa13.53□□□□□ -0.24
Chd3-202ENSMUST00000108661 Ca8P28651 291 aa13.53□□□□□ -0.24
Chd3-202ENSMUST00000108661 Gtf3c3Q3TMP1 882 aa13.53□□□□□ -0.24
Chd3-202ENSMUST00000108661 Srgap3Q812A2 1099 aa13.53□□□□□ -0.24
Chd3-202ENSMUST00000108661 Slc7a3P70423 618 aa13.53□□□□□ -0.24
Chd3-202ENSMUST00000108661 Rfx1P48377 963 aa13.53□□□□□ -0.24
Chd3-202ENSMUST00000108661 Cyp7a1Q64505 503 aa13.53□□□□□ -0.24
Chd3-202ENSMUST00000108661 Znf219Q6IQX8 726 aa13.53□□□□□ -0.24
Chd3-202ENSMUST00000108661 Dnajc2P54103 621 aaKnown RBP13.52□□□□□ -0.24
Chd3-202ENSMUST00000108661 Frat2Q8K025 231 aa13.52□□□□□ -0.24
Chd3-202ENSMUST00000108661 Gimap8Q75N62 688 aa13.52□□□□□ -0.24
Chd3-202ENSMUST00000108661 Nip7Q9CXK8 180 aaKnown RBP13.52□□□□□ -0.24
Chd3-202ENSMUST00000108661 Nap1l2P51860 460 aa13.52□□□□□ -0.24
Chd3-202ENSMUST00000108661 Dusp27Q148W8 1138 aa13.52□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 148.4 ms