RNA–Protein interactions for RNA: ENSMUST00000093346.5

H2afv-201, Transcript of Histone H2A.V, mousemouse

TSL 1 (best) BASIC

Gene H2afv, Length 519 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2afv-201ENSMUST00000093346 TkfcQ8VC30 578 aa17.71■□□□□ 0.43
H2afv-201ENSMUST00000093346 Rab3gap2Q8BMG7 1366 aa17.7■□□□□ 0.42
H2afv-201ENSMUST00000093346 Fer1l6E0CZ42 1862 aa17.7■□□□□ 0.42
H2afv-201ENSMUST00000093346 Pak3Q61036 559 aa17.7■□□□□ 0.42
H2afv-201ENSMUST00000093346 Ccne1Q61457 408 aa17.7■□□□□ 0.42
H2afv-201ENSMUST00000093346 FocadA2AKG8 1798 aa17.7■□□□□ 0.42
H2afv-201ENSMUST00000093346 Trim28Q62318 834 aa17.69■□□□□ 0.42
H2afv-201ENSMUST00000093346 Uhrf1bp1lA2RSJ4 1457 aa17.69■□□□□ 0.42
H2afv-201ENSMUST00000093346 Ppp1r15aP17564 657 aa17.68■□□□□ 0.42
H2afv-201ENSMUST00000093346 Zpr1Q62384 459 aa17.68■□□□□ 0.42
H2afv-201ENSMUST00000093346 Anp32bQ9EST5 272 aaKnown RBP17.68■□□□□ 0.42
H2afv-201ENSMUST00000093346 Nup153E9Q3G8 1462 aaKnown RBP17.68■□□□□ 0.42
H2afv-201ENSMUST00000093346 Kat6bQ8BRB7 1872 aa17.67■□□□□ 0.42
H2afv-201ENSMUST00000093346 Kdm6aO70546 1401 aa17.67■□□□□ 0.42
H2afv-201ENSMUST00000093346 PnisrA2AJT4 805 aaKnown RBP17.67■□□□□ 0.42
H2afv-201ENSMUST00000093346 Ppp2r1aQ76MZ3 589 aa17.66■□□□□ 0.42
H2afv-201ENSMUST00000093346 Zranb3Q6NZP1 1069 aa17.65■□□□□ 0.42
H2afv-201ENSMUST00000093346 Col22a1E9Q7P1 1613 aa17.65■□□□□ 0.42
H2afv-201ENSMUST00000093346 Col15a1O35206 1367 aa17.65■□□□□ 0.42
H2afv-201ENSMUST00000093346 Mst1rQ62190 1378 aa17.65■□□□□ 0.42
H2afv-201ENSMUST00000093346 Zfp777B9EKF4 885 aa17.64■□□□□ 0.41
H2afv-201ENSMUST00000093346 Eif4a2P10630 407 aa17.64■□□□□ 0.41
H2afv-201ENSMUST00000093346 Mast2Q60592 1734 aa17.64■□□□□ 0.41
H2afv-201ENSMUST00000093346 Vps33bP59016 617 aa17.63■□□□□ 0.41
H2afv-201ENSMUST00000093346 Ginm1Q91WR6 327 aa17.63■□□□□ 0.41
H2afv-201ENSMUST00000093346 Tnks1bp1P58871 1720 aa17.62■□□□□ 0.41
H2afv-201ENSMUST00000093346 Gm10471E9Q1C7 252 aa17.62■□□□□ 0.41
H2afv-201ENSMUST00000093346 MpndQ3TV65 487 aa17.62■□□□□ 0.41
H2afv-201ENSMUST00000093346 Rsph6aQ8CDR2 708 aa17.62■□□□□ 0.41
H2afv-201ENSMUST00000093346 Nlrp6Q91WS2 869 aa17.62■□□□□ 0.41
H2afv-201ENSMUST00000093346 Simc1E9Q6E9 1354 aa17.62■□□□□ 0.41
H2afv-201ENSMUST00000093346 Parp14Q2EMV9 1817 aa17.61■□□□□ 0.41
H2afv-201ENSMUST00000093346 Taok3Q8BYC6 898 aa17.61■□□□□ 0.41
H2afv-201ENSMUST00000093346 Cc2d1aQ8K1A6 943 aa17.61■□□□□ 0.41
H2afv-201ENSMUST00000093346 Nwd2Q6P5U7 1742 aa17.61■□□□□ 0.41
H2afv-201ENSMUST00000093346 Akap11E9Q777 1895 aa17.61■□□□□ 0.41
H2afv-201ENSMUST00000093346 Ankrd23Q812A3 306 aa17.6■□□□□ 0.41
H2afv-201ENSMUST00000093346 Adgrb1Q3UHD1 1582 aa17.59■□□□□ 0.41
H2afv-201ENSMUST00000093346 Eya1P97767 591 aa17.59■□□□□ 0.41
H2afv-201ENSMUST00000093346 Aplp2Q06335 707 aa17.57■□□□□ 0.4
H2afv-201ENSMUST00000093346 Sugp2Q8CH09 1067 aa17.57■□□□□ 0.4
H2afv-201ENSMUST00000093346 Slc12a5Q91V14 1138 aa17.57■□□□□ 0.4
H2afv-201ENSMUST00000093346 P2rx7Q9Z1M0 595 aa17.57■□□□□ 0.4
H2afv-201ENSMUST00000093346 Ly75Q60767 1723 aa17.56■□□□□ 0.4
H2afv-201ENSMUST00000093346 Ddb1Q3U1J4 1140 aaKnown RBP17.56■□□□□ 0.4
H2afv-201ENSMUST00000093346 Sik1Q60670 779 aa17.56■□□□□ 0.4
H2afv-201ENSMUST00000093346 Ppp6r1Q7TSI3 856 aa17.56■□□□□ 0.4
H2afv-201ENSMUST00000093346 Kcnh4A2A5F7 1018 aa17.55■□□□□ 0.4
H2afv-201ENSMUST00000093346 4930523C07RikE9Q2T4 99 aa17.54■□□□□ 0.4
H2afv-201ENSMUST00000093346 MpripP97434 1024 aa17.54■□□□□ 0.4
H2afv-201ENSMUST00000093346 Kiaa0319Q5SZV5 1081 aa17.54■□□□□ 0.4
H2afv-201ENSMUST00000093346 Ppp1r37Q8BKR5 712 aa17.54■□□□□ 0.4
H2afv-201ENSMUST00000093346 Elp1Q7TT37 1333 aaKnown RBP17.53■□□□□ 0.4
H2afv-201ENSMUST00000093346 Exoc5Q3TPX4 708 aa17.53■□□□□ 0.4
H2afv-201ENSMUST00000093346 4930572O03RikQ8C5Y0 211 aa17.53■□□□□ 0.4
H2afv-201ENSMUST00000093346 Gsdma3Q5Y4Y6 464 aa17.52■□□□□ 0.4
H2afv-201ENSMUST00000093346 Tsen2Q6P7W5 460 aa17.52■□□□□ 0.4
H2afv-201ENSMUST00000093346 GsdmaQ9EST1 446 aa17.52■□□□□ 0.4
H2afv-201ENSMUST00000093346 Fam50bQ9WTJ8 334 aa17.52■□□□□ 0.4
H2afv-201ENSMUST00000093346 ThemisQ8BGW0 636 aa17.51■□□□□ 0.39
H2afv-201ENSMUST00000093346 Rgs17Q9QZB0 210 aa17.51■□□□□ 0.39
H2afv-201ENSMUST00000093346 PalmQ9Z0P4 383 aa17.51■□□□□ 0.39
H2afv-201ENSMUST00000093346 Ahnak2E9PYB0 1738 aaKnown RBP17.5■□□□□ 0.39
H2afv-201ENSMUST00000093346 Spef2Q8C9J3 1734 aa17.48■□□□□ 0.39
H2afv-201ENSMUST00000093346 Gm21680A0A0G2JGR8 267 aa17.48■□□□□ 0.39
H2afv-201ENSMUST00000093346 Ccdc6D3YZP9 469 aa17.48■□□□□ 0.39
H2afv-201ENSMUST00000093346 Ubap1lG3UW59 384 aa17.48■□□□□ 0.39
H2afv-201ENSMUST00000093346 Rpgrip1lQ8CG73 1264 aa17.48■□□□□ 0.39
H2afv-201ENSMUST00000093346 Zcrb1Q9CZ96 217 aaKnown RBP17.48■□□□□ 0.39
H2afv-201ENSMUST00000093346 U2af1Q9D883 239 aaKnown RBP17.48■□□□□ 0.39
H2afv-201ENSMUST00000093346 Speer4bQ9D9F7 267 aa17.48■□□□□ 0.39
H2afv-201ENSMUST00000093346 Q7TT23 1179 aa17.47■□□□□ 0.39
H2afv-201ENSMUST00000093346 Rab11fip3Q8CHD8 1047 aa17.47■□□□□ 0.39
H2afv-201ENSMUST00000093346 HypkQ9CR41 129 aa17.47■□□□□ 0.39
H2afv-201ENSMUST00000093346 GakQ99KY4 1305 aa17.47■□□□□ 0.39
H2afv-201ENSMUST00000093346 Wwc2Q6NXJ0 1187 aa17.46■□□□□ 0.39
H2afv-201ENSMUST00000093346 Exoc6Q8R313 802 aa17.46■□□□□ 0.39
H2afv-201ENSMUST00000093346 Nsd3Q6P2L6 1439 aa17.46■□□□□ 0.39
H2afv-201ENSMUST00000093346 TnikP83510 1323 aa17.46■□□□□ 0.38
H2afv-201ENSMUST00000093346 Atf7ipQ7TT18 1306 aa17.46■□□□□ 0.38
H2afv-201ENSMUST00000093346 Kiaa1107Q80TK0 1369 aa17.45■□□□□ 0.38
H2afv-201ENSMUST00000093346 Arfgef2A2A5R2 1792 aa17.45■□□□□ 0.38
H2afv-201ENSMUST00000093346 Adamtsl1Q8BLI0 1745 aa17.44■□□□□ 0.38
H2afv-201ENSMUST00000093346 Stk31Q99MW1 1018 aa17.44■□□□□ 0.38
H2afv-201ENSMUST00000093346 Tns2Q8CGB6 1400 aa17.44■□□□□ 0.38
H2afv-201ENSMUST00000093346 Plin1Q8CGN5 517 aa17.43■□□□□ 0.38
H2afv-201ENSMUST00000093346 Eif3bQ8JZQ9 803 aaKnown RBP17.43■□□□□ 0.38
H2afv-201ENSMUST00000093346 Amotl1Q9D4H4 968 aa17.43■□□□□ 0.38
H2afv-201ENSMUST00000093346 Ppfibp2O35711 882 aa17.42■□□□□ 0.38
H2afv-201ENSMUST00000093346 Mcm10Q0VBD2 885 aa17.42■□□□□ 0.38
H2afv-201ENSMUST00000093346 Fchsd2Q3USJ8 740 aa17.42■□□□□ 0.38
H2afv-201ENSMUST00000093346 Lrit1Q8K099 624 aa17.42■□□□□ 0.38
H2afv-201ENSMUST00000093346 Larp1bA0A0A6YXJ7 370 aaKnown RBP17.41■□□□□ 0.38
H2afv-201ENSMUST00000093346 Sall2Q9QX96 1004 aa17.41■□□□□ 0.38
H2afv-201ENSMUST00000093346 Iqcf3Q9D498 203 aa17.4■□□□□ 0.38
H2afv-201ENSMUST00000093346 PappaQ8R4K8 1624 aa17.39■□□□□ 0.38
H2afv-201ENSMUST00000093346 GalcP54818 684 aa17.39■□□□□ 0.37
H2afv-201ENSMUST00000093346 Larp1Q6ZQ58 1072 aaKnown RBP17.38■□□□□ 0.37
H2afv-201ENSMUST00000093346 Phkg2Q9DB30 406 aa17.38■□□□□ 0.37
H2afv-201ENSMUST00000093346 Pnpla7A2AJ88 1352 aa17.38■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 154 ms