RNA–Protein interactions for RNA: ENSMUST00000090040.11

Ldb3-205, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 4,981 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-205ENSMUST00000090040 Pcdh10E9PXQ7 1057 aa12.93□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Mcm10Q0VBD2 885 aa12.93□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Slain2Q8CI08 581 aa12.93□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Cetn4Q8K4K1 168 aa12.93□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Dnai1Q8C0M8 701 aa12.93□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Trim28Q62318 834 aa12.93□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Aldh1l1Q8R0Y6 902 aa12.93□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Rapgef3Q8VCC8 918 aa12.92□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Trim44Q9QXA7 346 aa12.92□□□□□ -0.34
Ldb3-205ENSMUST00000090040 KdrP35918 1367 aa12.92□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Tceal9Q9DD24 104 aa12.92□□□□□ -0.34
Ldb3-205ENSMUST00000090040 TefQ9JLC6 301 aa12.92□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Htatsf1Q8BGC0 757 aa12.92□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Ehbp1l1Q99MS7 1716 aa12.92□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Ttll13A4Q9F6 804 aa12.92□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Ccdc146E9Q9F7 977 aa12.92□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Plekhm2Q80TQ5 1018 aa12.92□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Zeb2Q9R0G7 1215 aa12.92□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Mfap1aC0HKD8 439 aaKnown RBP12.91□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Mfap1bC0HKD9 439 aaKnown RBP12.91□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Slc4a10Q5DTL9 1118 aa12.91□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Nlgn1Q99K10 843 aa12.91□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Eif3bQ8JZQ9 803 aaKnown RBP12.91□□□□□ -0.34
Ldb3-205ENSMUST00000090040 MvpQ9EQK5 861 aa12.91□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Kcnh8P59111 1102 aa12.9□□□□□ -0.34
Ldb3-205ENSMUST00000090040 SkilQ60665 675 aa12.9□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Arhgef28P97433 1693 aa12.9□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Ddx54Q8K4L0 874 aaKnown RBP12.9□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Btbd11Q6GQW0 1109 aa12.9□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Kcna6Q61923 529 aa12.9□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Tmem132eQ6IEE6 982 aa12.9□□□□□ -0.34
Ldb3-205ENSMUST00000090040 MaddQ80U28 1577 aa12.9□□□□□ -0.34
Ldb3-205ENSMUST00000090040 Maco1Q7TQE6 664 aaKnown RBP12.89□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Speer4bQ9D9F7 267 aa12.89□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Smc4Q8CG47 1286 aa12.89□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Dip2aQ8BWT5 1523 aa12.88□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Cfdp1O88271 295 aaKnown RBP12.88□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Fkbp4P30416 458 aa12.88□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Dnajc5gQ8C632 165 aa12.88□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Kiaa1107Q80TK0 1369 aa12.88□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Hoxc9P09633 260 aa12.88□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Gm21680A0A0G2JGR8 267 aa12.88□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Mcm2P97310 904 aa12.88□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Dnajc10Q9DC23 793 aa12.88□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Wdr17E9Q271 1322 aa12.88□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Zmym3Q9JLM4 1370 aa12.88□□□□□ -0.35
Ldb3-205ENSMUST00000090040 PtpruB1AUH1 1446 aa12.88□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Bcl2l13P59017 434 aa12.87□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Amotl1Q9D4H4 968 aa12.87□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Gm21663A0A0G2JE01 267 aa12.87□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Gm7361D3Z6R1 267 aa12.87□□□□□ -0.35
Ldb3-205ENSMUST00000090040 5031410I06RikE9Q4E0 267 aa12.87□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Gm1979E9QAN3 267 aa12.87□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Gm5862K7N5V5 267 aa12.87□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Gm10220K7N660 267 aa12.87□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Cnnm1Q0GA42 951 aa12.87□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Tspyl2Q7TQI8 677 aa12.87□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Adam1bQ8R534 806 aa12.87□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Gnai2P08752 355 aaKnown RBP12.87□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Eya1P97767 591 aa12.87□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Tns3Q5SSZ5 1440 aa12.86□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Ankrd50F7BE84 1390 aa12.86□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Gimap5Q8BWF2 308 aa12.86□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Ppp2r3aB2RXC8 1150 aa12.86□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Hs1bp3Q3TC93 395 aa12.86□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Gnl3lQ6PGG6 577 aaKnown RBP12.86□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Mphosph10Q810V0 681 aaKnown RBP12.86□□□□□ -0.35
Ldb3-205ENSMUST00000090040 PtprmP28828 1452 aa12.85□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Q3UPC7 1272 aa12.85□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Cavin2Q63918 418 aaKnown RBP12.85□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Gemin5Q8BX17 1502 aaKnown RBP12.85□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Adgrl1Q80TR1 1466 aa12.85□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Usp19Q3UJD6 1360 aa12.85□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Chmp3Q9CQ10 224 aa12.84□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Fam50bQ9WTJ8 334 aa12.84□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Eif3aP23116 1344 aaKnown RBP12.84□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Smg7Q5RJH6 1138 aaKnown RBP12.84□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Ak7Q9D2H2 614 aa12.84□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Ttc21aQ8C0S4 1314 aa12.84□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Ncoa4Q5U4H9 625 aa12.84□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Q8BT18 775 aa12.84□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Amotl2Q8K371 772 aa12.84□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Trpm1Q2TV84 1622 aa12.84□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Hoxa7P02830 229 aa12.83□□□□□ -0.35
Ldb3-205ENSMUST00000090040 Cep170bQ80U49 1574 aa12.83□□□□□ -0.36
Ldb3-205ENSMUST00000090040 DnmbpQ6TXD4 1580 aa12.83□□□□□ -0.36
Ldb3-205ENSMUST00000090040 Cadps2Q8BYR5 1297 aa12.83□□□□□ -0.36
Ldb3-205ENSMUST00000090040 Flad1Q8R123 492 aa12.83□□□□□ -0.36
Ldb3-205ENSMUST00000090040 Tmem131lQ3U3D7 1597 aa12.83□□□□□ -0.36
Ldb3-205ENSMUST00000090040 Sf3b2Q3UJB0 878 aaKnown RBP12.83□□□□□ -0.36
Ldb3-205ENSMUST00000090040 Gcc1Q9D4H2 778 aa12.83□□□□□ -0.36
Ldb3-205ENSMUST00000090040 Ccdc183A2AJB1 534 aa12.82□□□□□ -0.36
Ldb3-205ENSMUST00000090040 KarsQ99MN1 595 aaKnown RBP12.82□□□□□ -0.36
Ldb3-205ENSMUST00000090040 Smc5Q8CG46 1101 aaKnown RBP12.82□□□□□ -0.36
Ldb3-205ENSMUST00000090040 Acsbg1Q99PU5 721 aa12.82□□□□□ -0.36
Ldb3-205ENSMUST00000090040 GorabQ8BRM2 368 aa12.82□□□□□ -0.36
Ldb3-205ENSMUST00000090040 Wwc1Q5SXA9 1104 aa12.81□□□□□ -0.36
Ldb3-205ENSMUST00000090040 Fam135bQ9DAI6 1403 aa12.81□□□□□ -0.36
Ldb3-205ENSMUST00000090040 Uhrf1bp1lA2RSJ4 1457 aa12.81□□□□□ -0.36
Ldb3-205ENSMUST00000090040 Qser1A2BIE1 1698 aa12.81□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms