RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Dhx30Q99PU8 1217 aaKnown RBP19.3■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Gys2Q8VCB3 704 aa19.3■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Ciz1Q8VEH2 845 aa19.3■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Usp16Q99LG0 825 aa19.3■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Map2k1P31938 393 aa19.3■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Rbm33Q9CXK9 1231 aaKnown RBP19.3■□□□□ 0.68
Col17a1-202ENSMUST00000086923 IqcgQ80W32 419 aa19.29■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Erlin1Q91X78 346 aa19.29■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Akap8Q9DBR0 687 aaKnown RBP19.29■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Tmc1Q8R4P5 757 aa19.29■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Skor1Q8BX46 964 aa19.28■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Irx4Q9QY61 515 aa19.28■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Zfp397Q7TNK4 527 aa19.28■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Ccdc43Q9CR29 222 aaKnown RBP19.28■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Larp1Q6ZQ58 1072 aaKnown RBP19.28■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Ccdc171E9Q1U1 1324 aa19.28■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Gm10471E9Q1C7 252 aa19.28■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Nkx1-2P42580 305 aa19.28■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Ppfibp2O35711 882 aa19.27■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Ercc6lQ8BHK9 1240 aa19.27■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Tspyl3Q3UYP3 334 aa19.27■□□□□ 0.68
Col17a1-202ENSMUST00000086923 Golga5Q9QYE6 729 aa19.27■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Zbtb22Q9Z0G7 638 aa19.27■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Catsper2A2ARP9 588 aa19.26■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Ppp2r1aQ76MZ3 589 aa19.26■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Rapgef2Q8CHG7 1496 aa19.26■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Cpsf2O35218 782 aaKnown RBP19.26■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Fan1Q69ZT1 1020 aa19.26■□□□□ 0.67
Col17a1-202ENSMUST00000086923 RalylQ8BTF8 293 aa19.26■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Tbc1d8Q9Z1A9 1134 aa19.26■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Gnai1B2RSH2 354 aa19.26■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Dhx16G3X8X0 1044 aaKnown RBP19.26■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Tax1bp1Q3UKC1 814 aaKnown RBP19.26■□□□□ 0.67
Col17a1-202ENSMUST00000086923 March6Q6ZQ89 909 aa19.26■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Naa25Q8BWZ3 972 aa19.26■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Gnai3Q9DC51 354 aa19.26■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Cep57l1Q8VDS7 400 aa19.26■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Ppp6r1Q7TSI3 856 aa19.25■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Sept6Q9R1T4 434 aa19.25■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Prpf4bQ61136 1007 aaKnown RBP19.25■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Prm3Q62100 101 aa19.25■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Clul1Q3ZRW6 464 aa19.25■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Tbc1d32Q3URV1 1296 aa19.24■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Abcf1Q6P542 837 aaKnown RBP19.24■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Fnbp4Q6ZQ03 1031 aa19.24■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Plekhh2Q8C115 1491 aa19.24■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Ccdc191J3QQ27 883 aa19.24■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Vps53Q8CCB4 832 aa19.24■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Trim29Q8R2Q0 587 aa19.24■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Sytl4Q9R0Q1 673 aa19.24■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Mindy4Q3UQI9 744 aa19.24■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Zkscan5Q9Z1D8 819 aa19.24■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Mcm5P49718 733 aa19.23■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Gm21671G3UY31 267 aa19.23■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Capn2O08529 700 aa19.23■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Ppp4r3bQ922R5 820 aa19.23■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Me1P06801 572 aa19.22■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Plekhd1B2RPU2 505 aa19.22■□□□□ 0.67
Col17a1-202ENSMUST00000086923 CarsQ9ER72 831 aaKnown RBP19.22■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Gng11P61953 73 aa19.22■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Fam76aQ922G2 307 aa19.22■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Mis12Q9CY25 206 aa19.22■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Fmn1Q05860 1466 aa19.22■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Jade2Q6ZQF7 829 aa19.21■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Luc7lQ9CYI4 371 aaKnown RBP19.21■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Swt1Q9DBQ9 907 aa19.21■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Tubb6Q922F4 447 aa19.21■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Pip4k2aO70172 405 aa19.21■□□□□ 0.67
Col17a1-202ENSMUST00000086923 Tango6Q8C3S2 1079 aa19.2■□□□□ 0.66
Col17a1-202ENSMUST00000086923 Ddx49Q4FZF3 480 aaKnown RBP19.2■□□□□ 0.66
Col17a1-202ENSMUST00000086923 Cfap73J3QPZ5 306 aa19.2■□□□□ 0.66
Col17a1-202ENSMUST00000086923 Usp25P57080 1055 aa19.2■□□□□ 0.66
Col17a1-202ENSMUST00000086923 Pank2Q3U4S0 443 aa19.2■□□□□ 0.66
Col17a1-202ENSMUST00000086923 Ccnb3Q810T2 1396 aa19.2■□□□□ 0.66
Col17a1-202ENSMUST00000086923 Fam177a1Q8BR63 207 aa19.2■□□□□ 0.66
Col17a1-202ENSMUST00000086923 Rab3gap2Q8BMG7 1366 aa19.19■□□□□ 0.66
Col17a1-202ENSMUST00000086923 Cep63Q3UPP8 700 aa19.19■□□□□ 0.66
Col17a1-202ENSMUST00000086923 Dhx29Q6PGC1 1365 aaKnown RBP19.19■□□□□ 0.66
Col17a1-202ENSMUST00000086923 Plekhg5Q66T02 1073 aa19.19■□□□□ 0.66
Col17a1-202ENSMUST00000086923 Ccdc96Q9CR92 584 aa19.19■□□□□ 0.66
Col17a1-202ENSMUST00000086923 Ccdc178Q8CDV0 866 aa19.19■□□□□ 0.66
Col17a1-202ENSMUST00000086923 Ccdc12Q8R344 166 aaKnown RBP19.19■□□□□ 0.66
Col17a1-202ENSMUST00000086923 Tex19.1Q99MV2 351 aa19.19■□□□□ 0.66
Col17a1-202ENSMUST00000086923 MycbpQ9EQS3 103 aa19.18■□□□□ 0.66
Col17a1-202ENSMUST00000086923 Cfap157Q0VFX2 523 aa19.18■□□□□ 0.66
Col17a1-202ENSMUST00000086923 Tmx3Q8BXZ1 456 aa19.18■□□□□ 0.66
Col17a1-202ENSMUST00000086923 4921504E06RikQ8CET2 560 aa19.18■□□□□ 0.66
Col17a1-202ENSMUST00000086923 Tmx1Q8VBT0 278 aa19.18■□□□□ 0.66
Col17a1-202ENSMUST00000086923 Ube2hP62257 183 aa19.18■□□□□ 0.66
Col17a1-202ENSMUST00000086923 Pof1bQ8K4L4 587 aa19.18■□□□□ 0.66
Col17a1-202ENSMUST00000086923 Cfap45Q9D9U9 551 aa19.17■□□□□ 0.66
Col17a1-202ENSMUST00000086923 Neurod6P48986 337 aa19.17■□□□□ 0.66
Col17a1-202ENSMUST00000086923 Pnpla2Q8BJ56 486 aa19.17■□□□□ 0.66
Col17a1-202ENSMUST00000086923 Atp6v1aP50516 617 aaKnown RBP19.17■□□□□ 0.66
Col17a1-202ENSMUST00000086923 Phlpp2Q8BXA7 1320 aa19.16■□□□□ 0.66
Col17a1-202ENSMUST00000086923 Erc1Q99MI1 1120 aa19.16■□□□□ 0.66
Col17a1-202ENSMUST00000086923 Mkrn1Q9QXP6 481 aa19.16■□□□□ 0.66
Col17a1-202ENSMUST00000086923 Rsrc1Q9DBU6 334 aa19.16■□□□□ 0.66
Col17a1-202ENSMUST00000086923 Nphp1Q9QY53 687 aa19.16■□□□□ 0.66
Col17a1-202ENSMUST00000086923 Letm1Q9Z2I0 738 aa19.16■□□□□ 0.66
Retrieved 100 of 22,080 RNA–protein pairs in 7.6 ms