RNA–Protein interactions for RNA: ENSMUST00000081170.8

Sgcb-201, Transcript of Beta-sarcoglycan, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sgcb, Length 3,786 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sgcb-201ENSMUST00000081170 PtmsQ9D0J8 101 aaKnown RBP14.02□□□□□ -0.16
Sgcb-201ENSMUST00000081170 Cdkn1cP49919 348 aa14.02□□□□□ -0.17
Sgcb-201ENSMUST00000081170 Adcy10Q8C0T9 1614 aa14.02□□□□□ -0.17
Sgcb-201ENSMUST00000081170 Rock2P70336 1388 aa14.02□□□□□ -0.17
Sgcb-201ENSMUST00000081170 Abca17E9PX95 1733 aa14.01□□□□□ -0.17
Sgcb-201ENSMUST00000081170 EappQ5BU09 281 aa14.01□□□□□ -0.17
Sgcb-201ENSMUST00000081170 Mad1l1Q9WTX8 717 aaKnown RBP14.01□□□□□ -0.17
Sgcb-201ENSMUST00000081170 NexmifQ5DTT1 1515 aa14.01□□□□□ -0.17
Sgcb-201ENSMUST00000081170 CalcaP70160 136 aa14.01□□□□□ -0.17
Sgcb-201ENSMUST00000081170 Kif7B7ZNG0 1348 aa14.01□□□□□ -0.17
Sgcb-201ENSMUST00000081170 Ccdc173A0JLY1 547 aa14.01□□□□□ -0.17
Sgcb-201ENSMUST00000081170 Bach2P97303 839 aa14.01□□□□□ -0.17
Sgcb-201ENSMUST00000081170 Q9D2X8 372 aa14.01□□□□□ -0.17
Sgcb-201ENSMUST00000081170 ImpactO55091 318 aa14□□□□□ -0.17
Sgcb-201ENSMUST00000081170 Ttll12Q3UDE2 639 aa14□□□□□ -0.17
Sgcb-201ENSMUST00000081170 Ncbp1Q3UYV9 790 aaKnown RBP14□□□□□ -0.17
Sgcb-201ENSMUST00000081170 Tmc1Q8R4P5 757 aa14□□□□□ -0.17
Sgcb-201ENSMUST00000081170 RereQ80TZ9 1558 aa14□□□□□ -0.17
Sgcb-201ENSMUST00000081170 TnikP83510 1323 aa14□□□□□ -0.17
Sgcb-201ENSMUST00000081170 Atl3Q91YH5 541 aa14□□□□□ -0.17
Sgcb-201ENSMUST00000081170 Slc7a3P70423 618 aa13.99□□□□□ -0.17
Sgcb-201ENSMUST00000081170 SkilQ60665 675 aa13.99□□□□□ -0.17
Sgcb-201ENSMUST00000081170 Ube2q2Q8K2Z8 378 aa13.99□□□□□ -0.17
Sgcb-201ENSMUST00000081170 CenpqQ9CPQ5 267 aa13.99□□□□□ -0.17
Sgcb-201ENSMUST00000081170 Tbc1d9Q3UYK3 1264 aa13.98□□□□□ -0.17
Sgcb-201ENSMUST00000081170 Mctp2Q5RJH2 878 aa13.98□□□□□ -0.17
Sgcb-201ENSMUST00000081170 Anp32cQ64G17 123 aa13.98□□□□□ -0.17
Sgcb-201ENSMUST00000081170 Pibf1E9Q6K3 756 aa13.98□□□□□ -0.17
Sgcb-201ENSMUST00000081170 Usp48Q3V0C5 1052 aa13.97□□□□□ -0.17
Sgcb-201ENSMUST00000081170 Ano6Q6P9J9 911 aa13.97□□□□□ -0.17
Sgcb-201ENSMUST00000081170 Syt10Q9R0N4 523 aa13.97□□□□□ -0.17
Sgcb-201ENSMUST00000081170 Mlh3A0A1Y7VMP7 1443 aa13.97□□□□□ -0.17
Sgcb-201ENSMUST00000081170 Atp10aO54827 1508 aa13.97□□□□□ -0.17
Sgcb-201ENSMUST00000081170 Filip1lQ6P6L0 1131 aa13.97□□□□□ -0.17
Sgcb-201ENSMUST00000081170 Sh3bp5Q9Z131 463 aa13.97□□□□□ -0.17
Sgcb-201ENSMUST00000081170 Fhod3Q76LL6 1578 aa13.96□□□□□ -0.17
Sgcb-201ENSMUST00000081170 FosbP13346 338 aa13.96□□□□□ -0.17
Sgcb-201ENSMUST00000081170 KdrP35918 1367 aa13.96□□□□□ -0.17
Sgcb-201ENSMUST00000081170 Caskin1Q6P9K8 1431 aa13.96□□□□□ -0.17
Sgcb-201ENSMUST00000081170 A2mQ6GQT1 1474 aa13.96□□□□□ -0.17
Sgcb-201ENSMUST00000081170 Dync1i1O88485 628 aa13.96□□□□□ -0.17
Sgcb-201ENSMUST00000081170 Rtel1Q0VGM9 1203 aa13.96□□□□□ -0.17
Sgcb-201ENSMUST00000081170 Mink1Q9JM52 1308 aa13.96□□□□□ -0.17
Sgcb-201ENSMUST00000081170 1700017N19RikA0A087WPJ1 469 aa13.95□□□□□ -0.18
Sgcb-201ENSMUST00000081170 EzrP26040 586 aaKnown RBP13.95□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Maco1Q7TQE6 664 aaKnown RBP13.95□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Triml2E9PW10 424 aa13.95□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Oas2E9Q9A9 742 aa13.95□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Trim55G3X8Y1 545 aa13.95□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Nap1l1P28656 391 aaKnown RBP13.95□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Phlpp2Q8BXA7 1320 aa13.95□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Irx4Q9QY61 515 aa13.95□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Arhgap4B1AUY3 965 aa13.94□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Mtx1P47802 317 aa13.94□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Kif2cQ922S8 721 aa13.94□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Xrn1P97789 1719 aaKnown RBP13.94□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Cspp1B2RX88 1205 aa13.94□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Snx13Q6PHS6 957 aa13.94□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Zfp397Q7TNK4 527 aa13.94□□□□□ -0.18
Sgcb-201ENSMUST00000081170 St18Q80TY4 1045 aa13.94□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Synj2Q9D2G5 1434 aa13.94□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Dip2cE9PWR4 1557 aa13.94□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Cdc42bpgQ80UW5 1551 aa13.94□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Map4P27546 1125 aaKnown RBP13.94□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Mcm6P97311 821 aa13.94□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Tshz3Q8CGV9 1081 aa13.93□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Kcng1A2BDX4 514 aa13.93□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Wdr3Q8BHB4 942 aaKnown RBP13.93□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Ccdc34Q3UI66 367 aa13.93□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Cchcr1Q8K2I2 770 aa13.93□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Zcchc17Q9ESX4 241 aaKnown RBP13.93□□□□□ -0.18
Sgcb-201ENSMUST00000081170 PrxO55103 1391 aa13.92□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Camsap2Q8C1B1 1461 aa13.92□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Rassf4Q8CB96 322 aa13.92□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Smarca5Q91ZW3 1051 aaKnown RBP13.92□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Irx5Q9JKQ4 484 aa13.92□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Uggt2E9Q4X2 1504 aa13.91□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Calcoco2A2A6M5 331 aa13.91□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Ccdc96Q9CR92 584 aa13.91□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Tbc1d8Q9Z1A9 1134 aa13.91□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Capn2O08529 700 aa13.91□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Ppip5k2Q6ZQB6 1129 aa13.91□□□□□ -0.18
Sgcb-201ENSMUST00000081170 1700010I14RikQ7TPG0 532 aa13.91□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Gm10093D3YYI8 482 aa13.91□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Gm42641I6L9G2 585 aa13.91□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Hdac1O09106 482 aaKnown RBP13.91□□□□□ -0.18
Sgcb-201ENSMUST00000081170 AtripQ8BMG1 785 aa13.91□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Kdm4aQ8BW72 1064 aa13.91□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Fam184bQ0KK56 942 aa13.9□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Arhgef40Q3UPH7 1517 aa13.9□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Dhx8A2A4P0 1244 aaKnown RBP13.9□□□□□ -0.18
Sgcb-201ENSMUST00000081170 L1td1Q587J6 782 aaKnown RBP13.9□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Trim25Q61510 634 aaKnown RBP13.9□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Ppp1r18Q8BQ30 594 aa13.9□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Mtus2Q3UHD3 1353 aa13.9□□□□□ -0.18
Sgcb-201ENSMUST00000081170 Rbm25B2RY56 838 aaKnown RBP13.9□□□□□ -0.19
Sgcb-201ENSMUST00000081170 Gm20521D3Z5F7 333 aa13.9□□□□□ -0.19
Sgcb-201ENSMUST00000081170 Dnajc2P54103 621 aaKnown RBP13.9□□□□□ -0.19
Sgcb-201ENSMUST00000081170 Gtf3c6Q9D8P7 227 aa13.9□□□□□ -0.19
Sgcb-201ENSMUST00000081170 Sh3bgrQ9WUZ7 214 aa13.9□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms