RNA–Protein interactions for RNA: ENSMUST00000054588.14

Col9a1-201, Transcript of Collagen alpha-1(IX) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col9a1, Length 3,834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-201ENSMUST00000054588 AU015836B2RUM3 263 aa13.38□□□□□ -0.27
Col9a1-201ENSMUST00000054588 Slc4a10Q5DTL9 1118 aa13.38□□□□□ -0.27
Col9a1-201ENSMUST00000054588 Cetn4Q8K4K1 168 aa13.38□□□□□ -0.27
Col9a1-201ENSMUST00000054588 Kiaa0556Q8C753 1610 aa13.38□□□□□ -0.27
Col9a1-201ENSMUST00000054588 Wwc1Q5SXA9 1104 aa13.37□□□□□ -0.27
Col9a1-201ENSMUST00000054588 Ubap1lG3UW59 384 aa13.37□□□□□ -0.27
Col9a1-201ENSMUST00000054588 NinlQ6ZQ12 1394 aa13.37□□□□□ -0.27
Col9a1-201ENSMUST00000054588 Adamts7Q68SA9 1657 aa13.36□□□□□ -0.27
Col9a1-201ENSMUST00000054588 Fyb1O35601 819 aa13.36□□□□□ -0.27
Col9a1-201ENSMUST00000054588 Prdm2A2A7B5 1709 aaKnown RBP13.36□□□□□ -0.27
Col9a1-201ENSMUST00000054588 Gnai1B2RSH2 354 aa13.35□□□□□ -0.27
Col9a1-201ENSMUST00000054588 Gnai3Q9DC51 354 aa13.35□□□□□ -0.27
Col9a1-201ENSMUST00000054588 Ppp1r3fQ9JIG4 799 aa13.35□□□□□ -0.27
Col9a1-201ENSMUST00000054588 AU019823E9PUQ3 292 aa13.35□□□□□ -0.27
Col9a1-201ENSMUST00000054588 Aldh1l1Q8R0Y6 902 aa13.35□□□□□ -0.27
Col9a1-201ENSMUST00000054588 Ipo4Q8VI75 1082 aa13.35□□□□□ -0.27
Col9a1-201ENSMUST00000054588 Dip2cE9PWR4 1557 aa13.35□□□□□ -0.27
Col9a1-201ENSMUST00000054588 RereQ80TZ9 1558 aa13.34□□□□□ -0.27
Col9a1-201ENSMUST00000054588 Q8BT18 775 aa13.34□□□□□ -0.27
Col9a1-201ENSMUST00000054588 Dnttip2Q8R2M2 758 aaKnown RBP13.34□□□□□ -0.27
Col9a1-201ENSMUST00000054588 HnrnpuQ8VEK3 800 aaKnown RBP13.34□□□□□ -0.27
Col9a1-201ENSMUST00000054588 Cgnl1Q6AW69 1298 aa13.33□□□□□ -0.27
Col9a1-201ENSMUST00000054588 Cog6Q8R3I3 657 aa13.33□□□□□ -0.27
Col9a1-201ENSMUST00000054588 Pik3r4Q8VD65 1358 aa13.33□□□□□ -0.28
Col9a1-201ENSMUST00000054588 MvpQ9EQK5 861 aa13.33□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Clstn1Q9EPL2 979 aa13.33□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Brpf1B2RRD7 1212 aa13.32□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Brd1E9PZ26 1189 aaKnown RBP13.32□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Pnmal2G3X9N3 661 aa13.32□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Terf2O35144 541 aa13.32□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Plekhm2Q80TQ5 1018 aa13.32□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Cdc37l1Q9CZP7 335 aa13.32□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Plekhg1F6S200 1446 aa13.32□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Ppp1r15aP17564 657 aa13.32□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Rsph3aQ3UFY4 516 aa13.32□□□□□ -0.28
Col9a1-201ENSMUST00000054588 TatQ8QZR1 454 aa13.32□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Q3UJC8 639 aa13.31□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Fkbp4P30416 458 aa13.31□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Trim28Q62318 834 aa13.31□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Tmem132eQ6IEE6 982 aa13.31□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Atp7bQ64446 1462 aa13.31□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Gm10471E9Q1C7 252 aa13.3□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Gm10563F6WIE4 79 aa13.3□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Ccne1Q61457 408 aa13.3□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Ahdc1Q6PAL7 1594 aaKnown RBP13.3□□□□□ -0.28
Col9a1-201ENSMUST00000054588 AdgbG3UZ78 1657 aa13.3□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Catsper2A2ARP9 588 aa13.3□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Q3UPC7 1272 aa13.3□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Dennd6aQ8BH65 605 aa13.3□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Antxr1Q9CZ52 562 aa13.3□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Nek4Q9Z1J2 792 aa13.3□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Sos1Q62245 1319 aa13.29□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Gm10093D3YYI8 482 aa13.29□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Hdac1O09106 482 aaKnown RBP13.29□□□□□ -0.28
Col9a1-201ENSMUST00000054588 GnpatP98192 678 aa13.29□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Map3k13Q1HKZ5 959 aa13.29□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Phf14Q9D4H9 881 aa13.29□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Ankrd44B2RXR6 993 aa13.29□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Ggt6Q6PDE7 497 aa13.29□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Snap23O09044 210 aa13.28□□□□□ -0.28
Col9a1-201ENSMUST00000054588 LifrP42703 1092 aa13.28□□□□□ -0.28
Col9a1-201ENSMUST00000054588 TmpoQ61033 693 aaKnown RBP13.28□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Isy1Q69ZQ2 285 aaKnown RBP13.28□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Mcm4P49717 862 aa13.28□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Ssh1Q76I79 1042 aa13.28□□□□□ -0.28
Col9a1-201ENSMUST00000054588 CltcQ68FD5 1675 aaKnown RBP13.28□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Nsd3Q6P2L6 1439 aa13.27□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Vamp4O70480 141 aa13.27□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Sv2bQ8BG39 683 aa13.27□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Smarca5Q91ZW3 1051 aaKnown RBP13.27□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Naip7Q9JIB3 1402 aa13.27□□□□□ -0.28
Col9a1-201ENSMUST00000054588 Cavin2Q63918 418 aaKnown RBP13.27□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Q9D2X8 372 aa13.27□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Cep170bQ80U49 1574 aa13.27□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Usp32F8VPZ3 1604 aa13.27□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Eif4g2Q62448 906 aaKnown RBP13.27□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Pdcl3Q8BVF2 240 aa13.27□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Ncapd2Q8K2Z4 1392 aa13.27□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Kif20aP97329 887 aa13.26□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Wdr63B2RY71 923 aa13.26□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Yeats2Q3TUF7 1407 aa13.26□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Cfdp1O88271 295 aaKnown RBP13.26□□□□□ -0.29
Col9a1-201ENSMUST00000054588 PtprmP28828 1452 aa13.25□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Zfp777B9EKF4 885 aa13.25□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Chmp3Q9CQ10 224 aa13.25□□□□□ -0.29
Col9a1-201ENSMUST00000054588 CarsQ9ER72 831 aaKnown RBP13.25□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Tmem94Q7TSH8 1360 aa13.25□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Zranb3Q6NZP1 1069 aa13.25□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Nol12Q8BG17 217 aa13.25□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Arhgef28P97433 1693 aa13.24□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Map3k19E9Q3S4 1311 aa13.24□□□□□ -0.29
Col9a1-201ENSMUST00000054588 PtmaP26350 111 aa13.24□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Mcm2P97310 904 aa13.24□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Rassf8Q8CJ96 419 aa13.24□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Kif2cQ922S8 721 aa13.24□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Gcc1Q9D4H2 778 aa13.24□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Hoxb7P09024 217 aa13.23□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Prim1P20664 417 aa13.23□□□□□ -0.29
Col9a1-201ENSMUST00000054588 1700010I14RikQ7TPG0 532 aa13.23□□□□□ -0.29
Col9a1-201ENSMUST00000054588 Qser1A2BIE1 1698 aa13.23□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms