RNA–Protein interactions for RNA: ENSMUST00000053414.12

Ccdc171-201, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Ccdc171, Length 4,525 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-201ENSMUST00000053414 Plcb2A3KGF7 1181 aa11.43□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 ScaperF8VQ70 1398 aaKnown RBP11.43□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Rbm27Q5SFM8 1060 aaKnown RBP11.43□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Stk24Q99KH8 431 aa11.43□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Dip2aQ8BWT5 1523 aa11.43□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Gm156Q58A37 223 aa11.43□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 SkilQ60665 675 aa11.43□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 GsdmaQ9EST1 446 aa11.43□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Abca14E9Q8F8 1683 aa11.43□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Rsph3aQ3UFY4 516 aa11.43□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 4931400O07RikQ9D4M5 137 aa11.43□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 LifrP42703 1092 aa11.42□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Kdm2aP59997 1161 aa11.42□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Ncbp1Q3UYV9 790 aaKnown RBP11.42□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Phf23Q8BSN5 401 aa11.42□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Kif3bQ61771 747 aa11.42□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 4930407I10RikD3Z5T8 1512 aa11.42□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Tecpr2Q3UH45 1423 aa11.42□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Usp40Q8BWR4 1235 aa11.42□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Kif13aQ9EQW7 1749 aa11.41□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Nutm1Q8BHP2 1126 aa11.41□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Prdm10Q3UTQ7 1184 aa11.41□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Ppp6r3Q922D4 844 aa11.41□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Alpk3Q924C5 1678 aa11.41□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Cep170bQ80U49 1574 aa11.41□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Gdpd2Q9ESM6 539 aa11.41□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Arhgef28P97433 1693 aa11.41□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Rnf123Q5XPI3 1314 aa11.41□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Vgll3P85442 326 aa11.41□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Gtf3c5Q8R2T8 520 aa11.41□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Cyp27a1Q9DBG1 533 aa11.4□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Zranb1Q7M760 708 aa11.4□□□□□ -0.58
Ccdc171-201ENSMUST00000053414 Cdk12Q14AX6 1484 aaKnown RBP11.4□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Srpk2O54781 681 aaKnown RBP11.39□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Gadd45bP22339 160 aa11.39□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Q3UPC7 1272 aa11.39□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Rbm42Q91V81 474 aaKnown RBP11.39□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Stac3Q8BZ71 360 aa11.39□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Skint5A7XUY5 1461 aa11.39□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Nsd2Q8BVE8 1365 aa11.39□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Stk11ipQ3TAA7 1072 aa11.39□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Tbc1d31Q6NXY1 996 aa11.38□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 ImpactO55091 318 aa11.38□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 PalldQ9ET54 1408 aa11.38□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Kiaa0753Q6A000 959 aa11.38□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 SrrtQ99MR6 875 aaKnown RBP11.38□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Trim26Q99PN3 545 aa11.38□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Synj2Q9D2G5 1434 aa11.37□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Trim27Q62158 513 aa11.37□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Fez1Q8K0X8 392 aa11.37□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Anp32cQ64G17 123 aa11.37□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Fan1Q69ZT1 1020 aa11.37□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Kdm4aQ8BW72 1064 aa11.37□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Lrrc7Q80TE7 1490 aa11.36□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 CenppQ9CZ92 286 aa11.36□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Plekhg1F6S200 1446 aa11.36□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Myo5bP21271 1818 aa11.36□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 VgfQ0VGU4 617 aa11.36□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Znf330Q922H9 316 aa11.36□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Atp10aO54827 1508 aa11.36□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Ccar1Q8CH18 1146 aaKnown RBP11.36□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Ttc21bQ0HA38 1315 aa11.36□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Prdm16A2A935 1275 aa11.35□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 AdgbG3UZ78 1657 aa11.35□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Cnga1P29974 684 aa11.35□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Bach2P97303 839 aa11.35□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Kcnf1Q7TSH7 493 aa11.35□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Ccdc94Q9D6J3 314 aa11.35□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Ptgs1P22437 602 aa11.35□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Mx2Q9WVP9 655 aa11.35□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Wdr78E9PYY5 807 aa11.35□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Vwa3bJ9JI28 736 aa11.35□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 DpydQ8CHR6 1025 aa11.35□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Gtf2e1Q9D0D5 440 aa11.35□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Vamp4O70480 141 aa11.34□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Rcan3Q9JKK0 239 aa11.34□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Nek4Q9Z1J2 792 aa11.34□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Chd4Q6PDQ2 1915 aaKnown RBP11.34□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Wwc1Q5SXA9 1104 aa11.34□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Chd1lQ9CXF7 900 aa11.34□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Trim44Q9QXA7 346 aa11.34□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Syce3B5KM66 88 aa11.34□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Nlrp6Q91WS2 869 aa11.34□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 Ptch1Q61115 1434 aa11.33□□□□□ -0.59
Ccdc171-201ENSMUST00000053414 MarsQ68FL6 902 aaKnown RBP11.33□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Nucb1Q02819 459 aaKnown RBP11.33□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Mum1Q6DID5 682 aa11.33□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Plekhm2Q80TQ5 1018 aa11.32□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 GorabQ8BRM2 368 aa11.32□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Kif24Q6NWW5 1356 aa11.32□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Ankrd44B2RXR6 993 aa11.32□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 CatipB9EKE5 520 aa11.32□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Pdia3P27773 505 aaKnown RBP11.32□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 FanclQ9CR14 375 aa11.32□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Swt1Q9DBQ9 907 aa11.32□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Depdc5P61460 1591 aa11.32□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 MpndQ3TV65 487 aa11.32□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 CarsQ9ER72 831 aaKnown RBP11.32□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Znf518aB2RRF6 1478 aaKnown RBP11.32□□□□□ -0.6
Ccdc171-201ENSMUST00000053414 Qser1A2BIE1 1698 aa11.32□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms