RNA–Protein interactions for RNA: ENSMUST00000050178.12

Ccdc60-201, Transcript of Coiled-coil domain-containing protein 60, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc60, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-201ENSMUST00000050178 Mapk8ip3Q9ESN9 1337 aa10.34□□□□□ -0.75
Ccdc60-201ENSMUST00000050178 Txndc2Q6P902 515 aa10.33□□□□□ -0.76
Ccdc60-201ENSMUST00000050178 Msh6P54276 1358 aaKnown RBP10.33□□□□□ -0.76
Ccdc60-201ENSMUST00000050178 Tmem2Q5FWI3 1383 aa10.33□□□□□ -0.76
Ccdc60-201ENSMUST00000050178 PalmQ9Z0P4 383 aa10.33□□□□□ -0.76
Ccdc60-201ENSMUST00000050178 Phf23Q8BSN5 401 aa10.33□□□□□ -0.76
Ccdc60-201ENSMUST00000050178 Ccar1Q8CH18 1146 aaKnown RBP10.33□□□□□ -0.76
Ccdc60-201ENSMUST00000050178 U2af1Q9D883 239 aaKnown RBP10.33□□□□□ -0.76
Ccdc60-201ENSMUST00000050178 Sos1Q62245 1319 aa10.32□□□□□ -0.76
Ccdc60-201ENSMUST00000050178 Rlbp1Q9Z275 317 aa10.32□□□□□ -0.76
Ccdc60-201ENSMUST00000050178 Swt1Q9DBQ9 907 aa10.32□□□□□ -0.76
Ccdc60-201ENSMUST00000050178 MarsQ68FL6 902 aaKnown RBP10.31□□□□□ -0.76
Ccdc60-201ENSMUST00000050178 GphnQ8BUV3 769 aaKnown RBP10.31□□□□□ -0.76
Ccdc60-201ENSMUST00000050178 HnrnpmQ9D0E1 729 aaKnown RBP10.31□□□□□ -0.76
Ccdc60-201ENSMUST00000050178 Tspyl2Q7TQI8 677 aa10.3□□□□□ -0.76
Ccdc60-201ENSMUST00000050178 FancaQ9JL70 1439 aa10.3□□□□□ -0.76
Ccdc60-201ENSMUST00000050178 Ncapd2Q8K2Z4 1392 aa10.3□□□□□ -0.76
Ccdc60-201ENSMUST00000050178 Nsd3Q6P2L6 1439 aa10.29□□□□□ -0.76
Ccdc60-201ENSMUST00000050178 Eif4a2P10630 407 aa10.29□□□□□ -0.76
Ccdc60-201ENSMUST00000050178 Fbxo41Q6NS60 873 aa10.29□□□□□ -0.76
Ccdc60-201ENSMUST00000050178 Ipo9Q91YE6 1041 aa10.29□□□□□ -0.76
Ccdc60-201ENSMUST00000050178 Idi1P58044 227 aa10.28□□□□□ -0.76
Ccdc60-201ENSMUST00000050178 Igsf1Q7TQA1 1317 aa10.28□□□□□ -0.76
Ccdc60-201ENSMUST00000050178 Vamp4O70480 141 aa10.28□□□□□ -0.76
Ccdc60-201ENSMUST00000050178 Nkx1-2P42580 305 aa10.28□□□□□ -0.76
Ccdc60-201ENSMUST00000050178 Neurod2Q62414 383 aa10.28□□□□□ -0.76
Ccdc60-201ENSMUST00000050178 Atp1b4Q99ME6 356 aa10.28□□□□□ -0.76
Ccdc60-201ENSMUST00000050178 EspnQ9ET47 871 aa10.28□□□□□ -0.76
Ccdc60-201ENSMUST00000050178 Frmpd2A0A140LI67 1392 aa10.27□□□□□ -0.76
Ccdc60-201ENSMUST00000050178 Tjp1P39447 1745 aaKnown RBP10.27□□□□□ -0.77
Ccdc60-201ENSMUST00000050178 NeflP08551 543 aa10.27□□□□□ -0.77
Ccdc60-201ENSMUST00000050178 Ncoa4Q5U4H9 625 aa10.27□□□□□ -0.77
Ccdc60-201ENSMUST00000050178 Pank1Q8K4K6 548 aa10.26□□□□□ -0.77
Ccdc60-201ENSMUST00000050178 Nlgn1Q99K10 843 aa10.26□□□□□ -0.77
Ccdc60-201ENSMUST00000050178 PappaQ8R4K8 1624 aa10.26□□□□□ -0.77
Ccdc60-201ENSMUST00000050178 Slc4a3P16283 1227 aa10.25□□□□□ -0.77
Ccdc60-201ENSMUST00000050178 Rbm25B2RY56 838 aaKnown RBP10.25□□□□□ -0.77
Ccdc60-201ENSMUST00000050178 Ksr2Q3UVC0 959 aa10.25□□□□□ -0.77
Ccdc60-201ENSMUST00000050178 Cdc37l1Q9CZP7 335 aa10.25□□□□□ -0.77
Ccdc60-201ENSMUST00000050178 KarsQ99MN1 595 aaKnown RBP10.25□□□□□ -0.77
Ccdc60-201ENSMUST00000050178 Q3UPC7 1272 aa10.24□□□□□ -0.77
Ccdc60-201ENSMUST00000050178 Atl3Q91YH5 541 aa10.24□□□□□ -0.77
Ccdc60-201ENSMUST00000050178 Shank3Q4ACU6 1730 aa10.24□□□□□ -0.77
Ccdc60-201ENSMUST00000050178 Gnai1B2RSH2 354 aa10.24□□□□□ -0.77
Ccdc60-201ENSMUST00000050178 Chl1P70232 1209 aa10.24□□□□□ -0.77
Ccdc60-201ENSMUST00000050178 Gnai3Q9DC51 354 aa10.24□□□□□ -0.77
Ccdc60-201ENSMUST00000050178 Ppp1r3fQ9JIG4 799 aa10.24□□□□□ -0.77
Ccdc60-201ENSMUST00000050178 Kat6bQ8BRB7 1872 aa10.23□□□□□ -0.77
Ccdc60-201ENSMUST00000050178 Kdm6aO70546 1401 aa10.23□□□□□ -0.77
Ccdc60-201ENSMUST00000050178 Aldh1l2Q8K009 923 aa10.23□□□□□ -0.77
Ccdc60-201ENSMUST00000050178 Aldh1l1Q8R0Y6 902 aa10.23□□□□□ -0.77
Ccdc60-201ENSMUST00000050178 Nhsl1Q8CAF4 1587 aa10.22□□□□□ -0.77
Ccdc60-201ENSMUST00000050178 Pnpla7A2AJ88 1352 aa10.22□□□□□ -0.77
Ccdc60-201ENSMUST00000050178 Kif24Q6NWW5 1356 aa10.22□□□□□ -0.77
Ccdc60-201ENSMUST00000050178 Zfp777B9EKF4 885 aa10.22□□□□□ -0.77
Ccdc60-201ENSMUST00000050178 Abcc12Q80WJ6 1366 aa10.22□□□□□ -0.77
Ccdc60-201ENSMUST00000050178 NudcO35685 332 aaKnown RBP10.21□□□□□ -0.77
Ccdc60-201ENSMUST00000050178 Plekhm2Q80TQ5 1018 aa10.21□□□□□ -0.77
Ccdc60-201ENSMUST00000050178 Phlpp2Q8BXA7 1320 aa10.21□□□□□ -0.77
Ccdc60-201ENSMUST00000050178 Gm10563F6WIE4 79 aa10.21□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 Sipa1l3G3X9J0 1776 aa10.2□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 Nwd2Q6P5U7 1742 aa10.19□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 Ankrd44B2RXR6 993 aa10.19□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 Hoxc9P09633 260 aa10.19□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 Wwc1Q5SXA9 1104 aa10.19□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 DiexfQ8BTT6 772 aaKnown RBP10.19□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 Maco1Q7TQE6 664 aaKnown RBP10.19□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 Chmp5Q9D7S9 219 aa10.19□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 MvpQ9EQK5 861 aa10.19□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 Tns2Q8CGB6 1400 aa10.18□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 Tmem94Q7TSH8 1360 aa10.18□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 Ppp2r3aB2RXC8 1150 aa10.18□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 Dennd6aQ8BH65 605 aa10.18□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 Rab11fip3Q8CHD8 1047 aa10.17□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 Foxp4Q9DBY0 795 aaKnown RBP10.17□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 Eya1P97767 591 aa10.17□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 G3bp1P97855 465 aaKnown RBP10.17□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 Mcm10Q0VBD2 885 aa10.17□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 Cabp2Q9JLK4 216 aa10.17□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 AU019823E9PUQ3 292 aa10.16□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 Wdr17E9Q271 1322 aa10.16□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 Birc3O08863 600 aa10.16□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 LifrP42703 1092 aa10.16□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 Tm6sf1P58749 370 aa10.16□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 Slit1Q80TR4 1531 aa10.16□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 Tbc1d32Q3URV1 1296 aa10.16□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 Ly75Q60767 1723 aa10.16□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 Rnf123Q5XPI3 1314 aa10.16□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 Nckap5lQ6GQX2 1323 aa10.16□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 TnrQ8BYI9 1358 aa10.16□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 Safb2Q80YR5 991 aaKnown RBP10.15□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 Slc35g1Q8BY79 368 aa10.15□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 Ccdc60Q8C4J0 545 aa10.15□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 Pdlim2Q8R1G6 349 aa10.15□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 Simc1E9Q6E9 1354 aa10.15□□□□□ -0.78
Ccdc60-201ENSMUST00000050178 Brd1E9PZ26 1189 aaKnown RBP10.15□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 Atf5O70191 283 aa10.14□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 Ddx60E9PZQ1 1711 aa10.14□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 Stk31Q99MW1 1018 aa10.14□□□□□ -0.79
Ccdc60-201ENSMUST00000050178 Iqcf3Q9D498 203 aa10.14□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 19 ms