RNA–Protein interactions for RNA: ENSMUST00000047697.11

Trim17-201, Transcript of E3 ubiquitin-protein ligase TRIM17, mousemouse

TSL 2 BASIC

Gene Trim17, Length 3,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17-201ENSMUST00000047697 Skint5A7XUY5 1461 aa12.66□□□□□ -0.38
Trim17-201ENSMUST00000047697 Tpm2P58774 284 aa12.66□□□□□ -0.38
Trim17-201ENSMUST00000047697 PaskQ8CEE6 1383 aa12.66□□□□□ -0.38
Trim17-201ENSMUST00000047697 Uggt2E9Q4X2 1504 aa12.66□□□□□ -0.38
Trim17-201ENSMUST00000047697 Filip1lQ6P6L0 1131 aa12.65□□□□□ -0.38
Trim17-201ENSMUST00000047697 Tmx3Q8BXZ1 456 aa12.65□□□□□ -0.38
Trim17-201ENSMUST00000047697 Gripap1Q8VD04 806 aa12.65□□□□□ -0.38
Trim17-201ENSMUST00000047697 Neurl4Q5NCX5 1563 aa12.65□□□□□ -0.38
Trim17-201ENSMUST00000047697 Rtf1A2AQ19 715 aaKnown RBP12.65□□□□□ -0.38
Trim17-201ENSMUST00000047697 Q3TQI7 289 aaKnown RBP12.64□□□□□ -0.39
Trim17-201ENSMUST00000047697 Hecw1Q8K4P8 1604 aa12.64□□□□□ -0.39
Trim17-201ENSMUST00000047697 Hmox1P14901 289 aa12.64□□□□□ -0.39
Trim17-201ENSMUST00000047697 Ddit3P35639 168 aa12.64□□□□□ -0.39
Trim17-201ENSMUST00000047697 CalcaP70160 136 aa12.64□□□□□ -0.39
Trim17-201ENSMUST00000047697 Iqsec2Q5DU25 1478 aa12.64□□□□□ -0.39
Trim17-201ENSMUST00000047697 Cpa2Q504N0 417 aa12.64□□□□□ -0.39
Trim17-201ENSMUST00000047697 Rbm27Q5SFM8 1060 aaKnown RBP12.64□□□□□ -0.39
Trim17-201ENSMUST00000047697 Ggnbp2Q5SV77 696 aa12.64□□□□□ -0.39
Trim17-201ENSMUST00000047697 Talpid3E9PV87 1520 aa12.63□□□□□ -0.39
Trim17-201ENSMUST00000047697 Prkar2bP31324 416 aa12.63□□□□□ -0.39
Trim17-201ENSMUST00000047697 Kif4P33174 1231 aa12.63□□□□□ -0.39
Trim17-201ENSMUST00000047697 Mcm2P97310 904 aa12.63□□□□□ -0.39
Trim17-201ENSMUST00000047697 Kdm4cQ8VCD7 1054 aa12.63□□□□□ -0.39
Trim17-201ENSMUST00000047697 4931400O07RikQ9D4M5 137 aa12.63□□□□□ -0.39
Trim17-201ENSMUST00000047697 Aifm3Q3TY86 605 aa12.63□□□□□ -0.39
Trim17-201ENSMUST00000047697 St18Q80TY4 1045 aa12.63□□□□□ -0.39
Trim17-201ENSMUST00000047697 Fez1Q8K0X8 392 aa12.62□□□□□ -0.39
Trim17-201ENSMUST00000047697 Gdpd2Q9ESM6 539 aa12.62□□□□□ -0.39
Trim17-201ENSMUST00000047697 Rims1Q99NE5 1463 aa12.62□□□□□ -0.39
Trim17-201ENSMUST00000047697 Pdia3P27773 505 aaKnown RBP12.62□□□□□ -0.39
Trim17-201ENSMUST00000047697 Erc2Q6PH08 957 aa12.62□□□□□ -0.39
Trim17-201ENSMUST00000047697 Fam13aQ8BGI4 693 aa12.62□□□□□ -0.39
Trim17-201ENSMUST00000047697 Dhx16G3X8X0 1044 aaKnown RBP12.61□□□□□ -0.39
Trim17-201ENSMUST00000047697 CenppQ9CZ92 286 aa12.61□□□□□ -0.39
Trim17-201ENSMUST00000047697 Anapc15-psA0A140T8L6 141 aa12.61□□□□□ -0.39
Trim17-201ENSMUST00000047697 Ythdc2B2RR83 1445 aaKnown RBP12.61□□□□□ -0.39
Trim17-201ENSMUST00000047697 Znf518aB2RRF6 1478 aaKnown RBP12.6□□□□□ -0.39
Trim17-201ENSMUST00000047697 ImpactO55091 318 aa12.6□□□□□ -0.39
Trim17-201ENSMUST00000047697 Ppp1r15aP17564 657 aa12.6□□□□□ -0.39
Trim17-201ENSMUST00000047697 NexnQ7TPW1 607 aa12.6□□□□□ -0.39
Trim17-201ENSMUST00000047697 Efcab6Q6P1E8 1516 aa12.6□□□□□ -0.39
Trim17-201ENSMUST00000047697 OvosQ3UU35 1456 aa12.6□□□□□ -0.39
Trim17-201ENSMUST00000047697 Gadd45bP22339 160 aa12.6□□□□□ -0.39
Trim17-201ENSMUST00000047697 Txndc2Q6P902 515 aa12.6□□□□□ -0.39
Trim17-201ENSMUST00000047697 Abca6Q8K441 1624 aa12.6□□□□□ -0.39
Trim17-201ENSMUST00000047697 Psme1P97371 249 aa12.6□□□□□ -0.39
Trim17-201ENSMUST00000047697 Nucb1Q02819 459 aaKnown RBP12.6□□□□□ -0.39
Trim17-201ENSMUST00000047697 Bcar3Q9QZK2 820 aa12.6□□□□□ -0.39
Trim17-201ENSMUST00000047697 Sox12Q04890 314 aa12.59□□□□□ -0.39
Trim17-201ENSMUST00000047697 Sv2bQ8BG39 683 aa12.59□□□□□ -0.39
Trim17-201ENSMUST00000047697 Uggt1Q6P5E4 1551 aa12.59□□□□□ -0.39
Trim17-201ENSMUST00000047697 Ncbp3Q8BZR9 615 aaKnown RBP12.59□□□□□ -0.39
Trim17-201ENSMUST00000047697 Ppp6r3Q922D4 844 aa12.59□□□□□ -0.39
Trim17-201ENSMUST00000047697 Pik3r4Q8VD65 1358 aa12.59□□□□□ -0.39
Trim17-201ENSMUST00000047697 Gpatch11Q3UFS4 262 aa12.59□□□□□ -0.39
Trim17-201ENSMUST00000047697 MsnP26041 577 aaKnown RBP12.58□□□□□ -0.4
Trim17-201ENSMUST00000047697 Atp6v1dP57746 247 aa12.58□□□□□ -0.4
Trim17-201ENSMUST00000047697 Nos1Q9Z0J4 1429 aa12.58□□□□□ -0.4
Trim17-201ENSMUST00000047697 Pank2Q3U4S0 443 aa12.58□□□□□ -0.4
Trim17-201ENSMUST00000047697 Tshz3Q8CGV9 1081 aa12.58□□□□□ -0.4
Trim17-201ENSMUST00000047697 Jakmip1Q8BVL9 626 aa12.58□□□□□ -0.4
Trim17-201ENSMUST00000047697 Rcan3Q9JKK0 239 aa12.58□□□□□ -0.4
Trim17-201ENSMUST00000047697 Hfm1D3Z4R1 1434 aa12.58□□□□□ -0.4
Trim17-201ENSMUST00000047697 Zkscan2G3X952 960 aa12.57□□□□□ -0.4
Trim17-201ENSMUST00000047697 Srgap3Q812A2 1099 aa12.57□□□□□ -0.4
Trim17-201ENSMUST00000047697 Aldh8a1Q8BH00 487 aa12.57□□□□□ -0.4
Trim17-201ENSMUST00000047697 Babam1Q3UI43 333 aa12.57□□□□□ -0.4
Trim17-201ENSMUST00000047697 Cyp27a1Q9DBG1 533 aa12.57□□□□□ -0.4
Trim17-201ENSMUST00000047697 Gli2Q0VGT2 1544 aa12.57□□□□□ -0.4
Trim17-201ENSMUST00000047697 Adgrl3Q80TS3 1537 aa12.57□□□□□ -0.4
Trim17-201ENSMUST00000047697 NhsB1AV60 1647 aa12.57□□□□□ -0.4
Trim17-201ENSMUST00000047697 Clcn1Q64347 994 aa12.56□□□□□ -0.4
Trim17-201ENSMUST00000047697 Olfml1Q8BSH2 233 aa12.56□□□□□ -0.4
Trim17-201ENSMUST00000047697 Ncapd2Q8K2Z4 1392 aa12.56□□□□□ -0.4
Trim17-201ENSMUST00000047697 Pdcd11Q6NS46 1862 aaKnown RBP12.56□□□□□ -0.4
Trim17-201ENSMUST00000047697 Zfp777B9EKF4 885 aa12.56□□□□□ -0.4
Trim17-201ENSMUST00000047697 Ptch1Q61115 1434 aa12.56□□□□□ -0.4
Trim17-201ENSMUST00000047697 Afap1Q80YS6 731 aa12.56□□□□□ -0.4
Trim17-201ENSMUST00000047697 Glipr1l2Q9CQ35 332 aa12.56□□□□□ -0.4
Trim17-201ENSMUST00000047697 Nphp1Q9QY53 687 aa12.56□□□□□ -0.4
Trim17-201ENSMUST00000047697 Plxnc1Q9QZC2 1574 aa12.55□□□□□ -0.4
Trim17-201ENSMUST00000047697 CgnP59242 1191 aa12.55□□□□□ -0.4
Trim17-201ENSMUST00000047697 Slc4a10Q5DTL9 1118 aa12.55□□□□□ -0.4
Trim17-201ENSMUST00000047697 Utp3Q9JI13 469 aaKnown RBP12.55□□□□□ -0.4
Trim17-201ENSMUST00000047697 Sytl4Q9R0Q1 673 aa12.55□□□□□ -0.4
Trim17-201ENSMUST00000047697 Iqgap3F8VQ29 1632 aa12.55□□□□□ -0.4
Trim17-201ENSMUST00000047697 Sos1Q62245 1319 aa12.55□□□□□ -0.4
Trim17-201ENSMUST00000047697 Smarce1O54941 411 aaKnown RBP12.55□□□□□ -0.4
Trim17-201ENSMUST00000047697 Kidins220E9Q9B7 1793 aa12.55□□□□□ -0.4
Trim17-201ENSMUST00000047697 Myom1Q62234 1667 aaKnown RBP12.55□□□□□ -0.4
Trim17-201ENSMUST00000047697 Brpf1B2RRD7 1212 aa12.55□□□□□ -0.4
Trim17-201ENSMUST00000047697 Ptpdc1Q6NZK8 747 aa12.55□□□□□ -0.4
Trim17-201ENSMUST00000047697 Naip7Q9JIB3 1402 aa12.54□□□□□ -0.4
Trim17-201ENSMUST00000047697 Abca8bQ8K440 1620 aa12.54□□□□□ -0.4
Trim17-201ENSMUST00000047697 Cwc27Q3TKY6 469 aa12.54□□□□□ -0.4
Trim17-201ENSMUST00000047697 TmpoQ61033 693 aaKnown RBP12.54□□□□□ -0.4
Trim17-201ENSMUST00000047697 Stk3Q9JI10 497 aa12.54□□□□□ -0.4
Trim17-201ENSMUST00000047697 Xrn1P97789 1719 aaKnown RBP12.54□□□□□ -0.4
Trim17-201ENSMUST00000047697 Gnai2P08752 355 aaKnown RBP12.54□□□□□ -0.4
Trim17-201ENSMUST00000047697 Tnnt2P50752 301 aa12.54□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms