RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Chmp3Q9CQ10 224 aa11.99□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Cabp2Q9JLK4 216 aa11.99□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Map4k4P97820 1233 aaKnown RBP11.99□□□□□ -0.49
Ldlr-201ENSMUST00000034713 4930572O03RikQ8C5Y0 211 aa11.99□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Kif1bQ60575 1816 aaKnown RBP11.99□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Lrrc7Q80TE7 1490 aa11.98□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Slc4a10Q5DTL9 1118 aa11.98□□□□□ -0.49
Ldlr-201ENSMUST00000034713 AnlnQ8K298 1121 aaKnown RBP11.98□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Yeats2Q3TUF7 1407 aa11.98□□□□□ -0.49
Ldlr-201ENSMUST00000034713 PzpQ61838 1495 aa11.98□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Zkscan2G3X952 960 aa11.98□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Ints3Q7TPD0 1041 aaKnown RBP11.98□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Ccdc47Q9D024 483 aaKnown RBP11.98□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Sv2bQ8BG39 683 aa11.97□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Tmc1Q8R4P5 757 aa11.97□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Tceal9Q9DD24 104 aa11.97□□□□□ -0.49
Ldlr-201ENSMUST00000034713 PdcQ9QW08 244 aa11.97□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Skint5A7XUY5 1461 aa11.97□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Kiaa1210E9Q0C6 1637 aa11.97□□□□□ -0.49
Ldlr-201ENSMUST00000034713 PsapQ61207 557 aaKnown RBP11.97□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Cfap65Q3V0B4 1847 aa11.97□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Tpd52l1O54818 204 aa11.97□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Ddx11Q6AXC6 880 aa11.97□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Erc2Q6PH08 957 aa11.97□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Phactr2B1AVP0 632 aa11.96□□□□□ -0.49
Ldlr-201ENSMUST00000034713 TmpoQ61033 693 aaKnown RBP11.96□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Cyp46a1Q9WVK8 500 aa11.96□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Nectin2P32507 530 aa11.96□□□□□ -0.49
Ldlr-201ENSMUST00000034713 PhaxQ9JJT9 385 aaKnown RBP11.96□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Nphp4P59240 1425 aa11.96□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Cdk13Q69ZA1 1511 aaKnown RBP11.96□□□□□ -0.49
Ldlr-201ENSMUST00000034713 Abca8bQ8K440 1620 aa11.96□□□□□ -0.49
Ldlr-201ENSMUST00000034713 A0A1L1SQF0 893 aa11.96□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Cplx2P84086 134 aa11.96□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Ssh1Q76I79 1042 aa11.96□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Nutm1Q8BHP2 1126 aa11.96□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Asxl2Q8BZ32 1370 aa11.96□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Gnl3lQ6PGG6 577 aaKnown RBP11.96□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Frmpd2A0A140LI67 1392 aa11.96□□□□□ -0.5
Ldlr-201ENSMUST00000034713 TefQ9JLC6 301 aa11.95□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Abcc3B2RX12 1523 aa11.95□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Pcdh10E9PXQ7 1057 aa11.95□□□□□ -0.5
Ldlr-201ENSMUST00000034713 NinlQ6ZQ12 1394 aa11.95□□□□□ -0.5
Ldlr-201ENSMUST00000034713 NaspQ99MD9 773 aaKnown RBP11.95□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Wwc1Q5SXA9 1104 aa11.95□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Hecw1Q8K4P8 1604 aa11.95□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Gimap5Q8BWF2 308 aa11.95□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Nol11Q8BJW5 723 aaKnown RBP11.94□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Evc2Q8K1G2 1220 aa11.94□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Ubxn4Q8VCH8 506 aa11.94□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Kif18aQ91WD7 886 aa11.94□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Sbno1Q689Z5 1390 aa11.94□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Larp1bA0A0A6YXJ7 370 aaKnown RBP11.94□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Tpm1P58771 284 aa11.94□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Bicd2Q921C5 820 aa11.94□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Speer4bQ9D9F7 267 aa11.94□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Kdm5cP41230 1554 aa11.94□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Gm21680A0A0G2JGR8 267 aa11.94□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Dhx8A2A4P0 1244 aaKnown RBP11.94□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Ccdc34Q3UI66 367 aa11.94□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Smg7Q5RJH6 1138 aaKnown RBP11.94□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Ppp1r9bQ6R891 817 aaKnown RBP11.93□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Ubap1lG3UW59 384 aa11.93□□□□□ -0.5
Ldlr-201ENSMUST00000034713 PogkQ80TC5 607 aa11.93□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Eif3bQ8JZQ9 803 aaKnown RBP11.93□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Slc12a5Q91V14 1138 aa11.93□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Neurl4Q5NCX5 1563 aa11.93□□□□□ -0.5
Ldlr-201ENSMUST00000034713 TnikP83510 1323 aa11.92□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Kif14L0N7N1 1674 aaKnown RBP11.92□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Fam184aE9PW83 1143 aa11.92□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Sos1Q62245 1319 aa11.92□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Zranb1Q7M760 708 aa11.92□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Cdkn1cP49919 348 aa11.92□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Psma5Q9Z2U1 241 aaKnown RBP11.92□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Gm21663A0A0G2JE01 267 aa11.91□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Gm7361D3Z6R1 267 aa11.91□□□□□ -0.5
Ldlr-201ENSMUST00000034713 5031410I06RikE9Q4E0 267 aa11.91□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Gm1979E9QAN3 267 aa11.91□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Gm5862K7N5V5 267 aa11.91□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Gm10220K7N660 267 aa11.91□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Slc5a4bQ91ZP4 660 aa11.91□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Ccne1Q61457 408 aa11.91□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Dixdc1Q80Y83 711 aa11.91□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Cdc37l1Q9CZP7 335 aa11.91□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Cfdp1O88271 295 aaKnown RBP11.91□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Cnnm1Q0GA42 951 aa11.91□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Nop14Q8R3N1 860 aaKnown RBP11.91□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Tubb6Q922F4 447 aa11.91□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Lamc1P02468 1607 aaKnown RBP11.91□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Bcl2l13P59017 434 aa11.9□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Liat1Q810M6 228 aa11.9□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Cog6Q8R3I3 657 aa11.9□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Fhod3Q76LL6 1578 aa11.9□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Tom1O88746 492 aa11.9□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Astn2Q80Z10 1352 aa11.9□□□□□ -0.5
Ldlr-201ENSMUST00000034713 Gpatch3Q8BIY1 525 aa11.9□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Zmym3Q9JLM4 1370 aa11.89□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Mcm4P49717 862 aa11.89□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Rnf214Q8BFU3 668 aaKnown RBP11.89□□□□□ -0.51
Ldlr-201ENSMUST00000034713 Hook1Q8BIL5 728 aa11.89□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 66.7 ms