RNA–Protein interactions for RNA: ENSMUST00000031894.12

Clcn1-201, Transcript of Chloride channel protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clcn1, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1-201ENSMUST00000031894 Cdk5rap2Q8K389 1822 aa12.97□□□□□ -0.33
Clcn1-201ENSMUST00000031894 Tubgcp6G5E8P0 1769 aa12.96□□□□□ -0.33
Clcn1-201ENSMUST00000031894 Zranb3Q6NZP1 1069 aa12.96□□□□□ -0.33
Clcn1-201ENSMUST00000031894 DekQ7TNV0 380 aaKnown RBP12.96□□□□□ -0.33
Clcn1-201ENSMUST00000031894 Kcnh5Q920E3 988 aa12.96□□□□□ -0.33
Clcn1-201ENSMUST00000031894 Rwdd1Q9CQK7 243 aa12.95□□□□□ -0.34
Clcn1-201ENSMUST00000031894 EspnQ9ET47 871 aa12.95□□□□□ -0.34
Clcn1-201ENSMUST00000031894 Gm10471E9Q1C7 252 aa12.94□□□□□ -0.34
Clcn1-201ENSMUST00000031894 Speer4f1Q9D5Q6 258 aa12.94□□□□□ -0.34
Clcn1-201ENSMUST00000031894 Ift172Q6VH22 1749 aa12.94□□□□□ -0.34
Clcn1-201ENSMUST00000031894 Sbno1Q689Z5 1390 aa12.93□□□□□ -0.34
Clcn1-201ENSMUST00000031894 Sgsm1Q8BPQ7 1093 aa12.93□□□□□ -0.34
Clcn1-201ENSMUST00000031894 Setd1aE9PYH6 1716 aa12.93□□□□□ -0.34
Clcn1-201ENSMUST00000031894 NudcO35685 332 aaKnown RBP12.92□□□□□ -0.34
Clcn1-201ENSMUST00000031894 Ccne1Q61457 408 aa12.92□□□□□ -0.34
Clcn1-201ENSMUST00000031894 Ppp2r1aQ76MZ3 589 aa12.92□□□□□ -0.34
Clcn1-201ENSMUST00000031894 Plcb2A3KGF7 1181 aa12.92□□□□□ -0.34
Clcn1-201ENSMUST00000031894 U2af1Q9D883 239 aaKnown RBP12.92□□□□□ -0.34
Clcn1-201ENSMUST00000031894 Cdhr2E9Q7P9 1308 aa12.92□□□□□ -0.34
Clcn1-201ENSMUST00000031894 Itsn2Q9Z0R6 1659 aa12.92□□□□□ -0.34
Clcn1-201ENSMUST00000031894 Thsd7aQ69ZU6 1645 aa12.91□□□□□ -0.34
Clcn1-201ENSMUST00000031894 Abca14E9Q8F8 1683 aa12.91□□□□□ -0.34
Clcn1-201ENSMUST00000031894 Abcc10Q8R4P9 1501 aa12.91□□□□□ -0.34
Clcn1-201ENSMUST00000031894 Zpr1Q62384 459 aa12.91□□□□□ -0.34
Clcn1-201ENSMUST00000031894 Irx6Q9ER75 438 aa12.91□□□□□ -0.34
Clcn1-201ENSMUST00000031894 Lmod3E9QA62 571 aa12.91□□□□□ -0.34
Clcn1-201ENSMUST00000031894 Amotl2Q8K371 772 aa12.91□□□□□ -0.34
Clcn1-201ENSMUST00000031894 Mbd3Q9Z2D8 285 aaKnown RBP12.91□□□□□ -0.34
Clcn1-201ENSMUST00000031894 PtpruB1AUH1 1446 aa12.9□□□□□ -0.34
Clcn1-201ENSMUST00000031894 Col18a1P39061 1774 aa12.9□□□□□ -0.34
Clcn1-201ENSMUST00000031894 Nol11Q8BJW5 723 aaKnown RBP12.9□□□□□ -0.34
Clcn1-201ENSMUST00000031894 Arap3Q8R5G7 1538 aa12.9□□□□□ -0.34
Clcn1-201ENSMUST00000031894 Iqsec2Q5DU25 1478 aa12.9□□□□□ -0.34
Clcn1-201ENSMUST00000031894 InhbeO08717 350 aa12.89□□□□□ -0.35
Clcn1-201ENSMUST00000031894 MpripP97434 1024 aa12.89□□□□□ -0.35
Clcn1-201ENSMUST00000031894 IbtkQ6ZPR6 1352 aaKnown RBP12.89□□□□□ -0.35
Clcn1-201ENSMUST00000031894 Htatsf1Q8BGC0 757 aa12.89□□□□□ -0.35
Clcn1-201ENSMUST00000031894 Znf335A2A5K6 1337 aa12.88□□□□□ -0.35
Clcn1-201ENSMUST00000031894 Fam50bQ9WTJ8 334 aa12.88□□□□□ -0.35
Clcn1-201ENSMUST00000031894 Ncoa4Q5U4H9 625 aa12.88□□□□□ -0.35
Clcn1-201ENSMUST00000031894 Zeb2Q9R0G7 1215 aa12.88□□□□□ -0.35
Clcn1-201ENSMUST00000031894 Cald1E9QA15 768 aaKnown RBP12.88□□□□□ -0.35
Clcn1-201ENSMUST00000031894 Tsen2Q6P7W5 460 aa12.88□□□□□ -0.35
Clcn1-201ENSMUST00000031894 Ak7Q9D2H2 614 aa12.88□□□□□ -0.35
Clcn1-201ENSMUST00000031894 NalcnQ8BXR5 1738 aa12.88□□□□□ -0.35
Clcn1-201ENSMUST00000031894 Mre11Q61216 706 aa12.87□□□□□ -0.35
Clcn1-201ENSMUST00000031894 Trim44Q9QXA7 346 aa12.87□□□□□ -0.35
Clcn1-201ENSMUST00000031894 Astn2Q80Z10 1352 aa12.87□□□□□ -0.35
Clcn1-201ENSMUST00000031894 Rab3gap2Q8BMG7 1366 aa12.87□□□□□ -0.35
Clcn1-201ENSMUST00000031894 TkfcQ8VC30 578 aa12.86□□□□□ -0.35
Clcn1-201ENSMUST00000031894 Kif20bQ80WE4 1774 aaKnown RBP12.86□□□□□ -0.35
Clcn1-201ENSMUST00000031894 Card10P58660 1021 aa12.86□□□□□ -0.35
Clcn1-201ENSMUST00000031894 Ipo8Q7TMY7 1010 aa12.85□□□□□ -0.35
Clcn1-201ENSMUST00000031894 Q8BT18 775 aa12.85□□□□□ -0.35
Clcn1-201ENSMUST00000031894 Pdcl3Q8BVF2 240 aa12.85□□□□□ -0.35
Clcn1-201ENSMUST00000031894 OptnQ8K3K8 584 aa12.85□□□□□ -0.35
Clcn1-201ENSMUST00000031894 MaddQ80U28 1577 aa12.85□□□□□ -0.35
Clcn1-201ENSMUST00000031894 Sipa1l2Q80TE4 1722 aa12.85□□□□□ -0.35
Clcn1-201ENSMUST00000031894 Pola1P33609 1465 aa12.85□□□□□ -0.35
Clcn1-201ENSMUST00000031894 DnmbpQ6TXD4 1580 aa12.85□□□□□ -0.35
Clcn1-201ENSMUST00000031894 Cc2d1aQ8K1A6 943 aa12.85□□□□□ -0.35
Clcn1-201ENSMUST00000031894 Senp3Q9EP97 568 aaKnown RBP12.85□□□□□ -0.35
Clcn1-201ENSMUST00000031894 Usp32F8VPZ3 1604 aa12.84□□□□□ -0.35
Clcn1-201ENSMUST00000031894 Golga2Q921M4 999 aa12.84□□□□□ -0.35
Clcn1-201ENSMUST00000031894 Larp1bA0A0A6YXJ7 370 aaKnown RBP12.84□□□□□ -0.35
Clcn1-201ENSMUST00000031894 Ccdc30Q8BVF4 654 aa12.84□□□□□ -0.35
Clcn1-201ENSMUST00000031894 Plekhh1Q80TI1 1356 aa12.83□□□□□ -0.36
Clcn1-201ENSMUST00000031894 Gm21680A0A0G2JGR8 267 aa12.83□□□□□ -0.36
Clcn1-201ENSMUST00000031894 Hoxc9P09633 260 aa12.83□□□□□ -0.36
Clcn1-201ENSMUST00000031894 CrklP47941 303 aa12.83□□□□□ -0.36
Clcn1-201ENSMUST00000031894 Cntnap1O54991 1385 aa12.83□□□□□ -0.36
Clcn1-201ENSMUST00000031894 Ncapd2Q8K2Z4 1392 aa12.83□□□□□ -0.36
Clcn1-201ENSMUST00000031894 Ciz1Q8VEH2 845 aa12.82□□□□□ -0.36
Clcn1-201ENSMUST00000031894 DccP70211 1447 aa12.82□□□□□ -0.36
Clcn1-201ENSMUST00000031894 NktrP30415 1453 aa12.82□□□□□ -0.36
Clcn1-201ENSMUST00000031894 FancaQ9JL70 1439 aa12.82□□□□□ -0.36
Clcn1-201ENSMUST00000031894 SlkO54988 1233 aa12.82□□□□□ -0.36
Clcn1-201ENSMUST00000031894 Ccdc129Q14B48 1034 aa12.82□□□□□ -0.36
Clcn1-201ENSMUST00000031894 RgmbQ7TQ33 436 aa12.82□□□□□ -0.36
Clcn1-201ENSMUST00000031894 Plekhd1B2RPU2 505 aa12.82□□□□□ -0.36
Clcn1-201ENSMUST00000031894 Cluap1Q8R3P7 413 aa12.82□□□□□ -0.36
Clcn1-201ENSMUST00000031894 Slc12a5Q91V14 1138 aa12.82□□□□□ -0.36
Clcn1-201ENSMUST00000031894 Speer4bQ9D9F7 267 aa12.82□□□□□ -0.36
Clcn1-201ENSMUST00000031894 GsdmaQ9EST1 446 aa12.82□□□□□ -0.36
Clcn1-201ENSMUST00000031894 Mapk8ip3Q9ESN9 1337 aa12.81□□□□□ -0.36
Clcn1-201ENSMUST00000031894 Adgrl1Q80TR1 1466 aa12.81□□□□□ -0.36
Clcn1-201ENSMUST00000031894 Zmym3Q9JLM4 1370 aa12.81□□□□□ -0.36
Clcn1-201ENSMUST00000031894 Nid2O88322 1403 aa12.8□□□□□ -0.36
Clcn1-201ENSMUST00000031894 Tex14Q7M6U3 1450 aa12.79□□□□□ -0.36
Clcn1-201ENSMUST00000031894 Mcm10Q0VBD2 885 aa12.79□□□□□ -0.36
Clcn1-201ENSMUST00000031894 Pm20d1Q8C165 503 aa12.79□□□□□ -0.36
Clcn1-201ENSMUST00000031894 Stk31Q99MW1 1018 aa12.79□□□□□ -0.36
Clcn1-201ENSMUST00000031894 Eif4a2P10630 407 aa12.78□□□□□ -0.36
Clcn1-201ENSMUST00000031894 PalmQ9Z0P4 383 aa12.78□□□□□ -0.36
Clcn1-201ENSMUST00000031894 Zfp777B9EKF4 885 aa12.78□□□□□ -0.36
Clcn1-201ENSMUST00000031894 Hoxb7P09024 217 aa12.78□□□□□ -0.36
Clcn1-201ENSMUST00000031894 Exoc5Q3TPX4 708 aa12.78□□□□□ -0.36
Clcn1-201ENSMUST00000031894 D430041D05RikF6ZGR6 1678 aa12.77□□□□□ -0.36
Clcn1-201ENSMUST00000031894 Nkx1-2P42580 305 aa12.77□□□□□ -0.37
Clcn1-201ENSMUST00000031894 Eya1P97767 591 aa12.77□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms