RNA–Protein interactions for RNA: ENSMUST00000031894.12

Clcn1-201, Transcript of Chloride channel protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clcn1, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1-201ENSMUST00000031894 NischQ80TM9 1593 aa20.23■□□□□ 0.83
Clcn1-201ENSMUST00000031894 Gm35339A0A140LHH9 1649 aa19.78■□□□□ 0.76
Clcn1-201ENSMUST00000031894 Abcc9P70170 1546 aa19.39■□□□□ 0.7
Clcn1-201ENSMUST00000031894 Abcc8B2RUS7 1588 aa19.35■□□□□ 0.69
Clcn1-201ENSMUST00000031894 Rhox8Q6VSS7 320 aa18.69■□□□□ 0.58
Clcn1-201ENSMUST00000031894 ScribQ80U72 1612 aa18.42■□□□□ 0.54
Clcn1-201ENSMUST00000031894 NacadQ5SWP3 1504 aa18.09■□□□□ 0.49
Clcn1-201ENSMUST00000031894 Kdm5dQ62240 1548 aa18.05■□□□□ 0.48
Clcn1-201ENSMUST00000031894 Dcaf1Q80TR8 1506 aa17.66■□□□□ 0.42
Clcn1-201ENSMUST00000031894 Sycp2Q9CUU3 1500 aa17.66■□□□□ 0.42
Clcn1-201ENSMUST00000031894 Rb1cc1Q9ESK9 1588 aa17.64■□□□□ 0.42
Clcn1-201ENSMUST00000031894 Zcchc6Q5BLK4 1491 aaKnown RBP17.55■□□□□ 0.4
Clcn1-201ENSMUST00000031894 Ccdc136Q3TVA9 1136 aa17.37■□□□□ 0.37
Clcn1-201ENSMUST00000031894 Baz1aO88379 1555 aa17.33■□□□□ 0.36
Clcn1-201ENSMUST00000031894 BicraF8VPZ9 1578 aa17.29■□□□□ 0.36
Clcn1-201ENSMUST00000031894 Dnajc5bQ9CQ94 199 aa17.11■□□□□ 0.33
Clcn1-201ENSMUST00000031894 Pds5bQ4VA53 1446 aaKnown RBP17.06■□□□□ 0.32
Clcn1-201ENSMUST00000031894 Crybg2B7ZCC2 1516 aa17.05■□□□□ 0.32
Clcn1-201ENSMUST00000031894 Esf1Q3V1V3 845 aaKnown RBP17.04■□□□□ 0.32
Clcn1-201ENSMUST00000031894 Cecr2E9Q2Z1 1453 aa16.9■□□□□ 0.3
Clcn1-201ENSMUST00000031894 Atad2bE9Q166 1460 aaKnown RBP16.88■□□□□ 0.29
Clcn1-201ENSMUST00000031894 Ehmt2Q9Z148 1263 aaKnown RBP16.87■□□□□ 0.29
Clcn1-201ENSMUST00000031894 Trim41Q5NCC3 630 aa16.87■□□□□ 0.29
Clcn1-201ENSMUST00000031894 Rtl1Q7M732 1744 aa16.83■□□□□ 0.28
Clcn1-201ENSMUST00000031894 Ccdc180J3QNE4 1664 aa16.83■□□□□ 0.28
Clcn1-201ENSMUST00000031894 Ercc6F8VPZ5 1481 aa16.81■□□□□ 0.28
Clcn1-201ENSMUST00000031894 Smarca2Q6DIC0 1577 aa16.75■□□□□ 0.27
Clcn1-201ENSMUST00000031894 Ubl4bQ9CQ84 188 aa16.74■□□□□ 0.27
Clcn1-201ENSMUST00000031894 Cngb1E1AZ71 1325 aa16.73■□□□□ 0.27
Clcn1-201ENSMUST00000031894 Smarca4Q3TKT4 1613 aaKnown RBP16.71■□□□□ 0.27
Clcn1-201ENSMUST00000031894 Rpgrip1Q9EPQ2 1331 aa16.69■□□□□ 0.26
Clcn1-201ENSMUST00000031894 Brd4Q9ESU6 1400 aaKnown RBP16.66■□□□□ 0.26
Clcn1-201ENSMUST00000031894 Iqgap2Q3UQ44 1575 aa16.63■□□□□ 0.25
Clcn1-201ENSMUST00000031894 Il27Q8K3I6 234 aa16.53■□□□□ 0.24
Clcn1-201ENSMUST00000031894 Phldb1Q6PDH0 1371 aaKnown RBP16.51■□□□□ 0.23
Clcn1-201ENSMUST00000031894 CftrP26361 1476 aa16.51■□□□□ 0.23
Clcn1-201ENSMUST00000031894 Cc2d2aQ8CFW7 1633 aa16.49■□□□□ 0.23
Clcn1-201ENSMUST00000031894 Thoc2B1AZI6 1594 aaKnown RBP16.48■□□□□ 0.23
Clcn1-201ENSMUST00000031894 Frmpd1A2AKB4 1549 aa16.48■□□□□ 0.23
Clcn1-201ENSMUST00000031894 Synj1Q8CHC4 1574 aa16.44■□□□□ 0.22
Clcn1-201ENSMUST00000031894 Wdr62Q3U3T8 1523 aa16.38■□□□□ 0.21
Clcn1-201ENSMUST00000031894 Npm1Q61937 292 aaKnown RBP16.38■□□□□ 0.21
Clcn1-201ENSMUST00000031894 Kif15Q6P9L6 1387 aa16.34■□□□□ 0.21
Clcn1-201ENSMUST00000031894 Cttnbp2B9EJA2 1648 aa16.3■□□□□ 0.2
Clcn1-201ENSMUST00000031894 Rsf1E9PWW9 1441 aaKnown RBP16.28■□□□□ 0.2
Clcn1-201ENSMUST00000031894 Acin1Q9JIX8 1338 aaKnown RBP16.23■□□□□ 0.19
Clcn1-201ENSMUST00000031894 Fam135aQ6NS59 1506 aa16.21■□□□□ 0.19
Clcn1-201ENSMUST00000031894 Cux2P70298 1426 aa16.18■□□□□ 0.18
Clcn1-201ENSMUST00000031894 Pcgf6Q99NA9 353 aa16.16■□□□□ 0.18
Clcn1-201ENSMUST00000031894 Mrc2Q64449 1479 aa16.13■□□□□ 0.17
Clcn1-201ENSMUST00000031894 Golga3P55937 1487 aa16.11■□□□□ 0.17
Clcn1-201ENSMUST00000031894 Zeb1Q64318 1117 aa16.08■□□□□ 0.17
Clcn1-201ENSMUST00000031894 Gab3Q8BSM5 595 aa16.08■□□□□ 0.16
Clcn1-201ENSMUST00000031894 HrcG5E8J6 738 aa16.04■□□□□ 0.16
Clcn1-201ENSMUST00000031894 Npm2Q80W85 207 aa16.01■□□□□ 0.15
Clcn1-201ENSMUST00000031894 Chic1Q8CBW7 227 aa16■□□□□ 0.15
Clcn1-201ENSMUST00000031894 Cep164Q5DU05 1446 aa16■□□□□ 0.15
Clcn1-201ENSMUST00000031894 Ccdc18Q640L5 1455 aa15.96■□□□□ 0.15
Clcn1-201ENSMUST00000031894 Unc13aQ4KUS2 1712 aa15.88■□□□□ 0.13
Clcn1-201ENSMUST00000031894 Baz1bQ9Z277 1479 aa15.87■□□□□ 0.13
Clcn1-201ENSMUST00000031894 Dhx29Q6PGC1 1365 aaKnown RBP15.86■□□□□ 0.13
Clcn1-201ENSMUST00000031894 LrpprcQ6PB66 1392 aaKnown RBP15.83■□□□□ 0.12
Clcn1-201ENSMUST00000031894 Fmn1Q05860 1466 aa15.82■□□□□ 0.12
Clcn1-201ENSMUST00000031894 Myt1lP97500 1187 aa15.82■□□□□ 0.12
Clcn1-201ENSMUST00000031894 Supt5hO55201 1082 aaKnown RBP15.81■□□□□ 0.12
Clcn1-201ENSMUST00000031894 Ccdc88bQ4QRL3 1481 aa15.81■□□□□ 0.12
Clcn1-201ENSMUST00000031894 Pelp1Q9DBD5 1123 aaKnown RBP15.8■□□□□ 0.12
Clcn1-201ENSMUST00000031894 Lamc3Q9R0B6 1581 aa15.79■□□□□ 0.12
Clcn1-201ENSMUST00000031894 Urb2E9Q7L1 1524 aaKnown RBP15.73■□□□□ 0.11
Clcn1-201ENSMUST00000031894 Plb1Q3TTY0 1478 aa15.69■□□□□ 0.1
Clcn1-201ENSMUST00000031894 Top2bQ64511 1612 aa15.68■□□□□ 0.1
Clcn1-201ENSMUST00000031894 Kif21aQ9QXL2 1672 aa15.66■□□□□ 0.1
Clcn1-201ENSMUST00000031894 Camsap1A2AHC3 1581 aa15.62■□□□□ 0.09
Clcn1-201ENSMUST00000031894 Las1lA2BE28 776 aaKnown RBP15.61■□□□□ 0.09
Clcn1-201ENSMUST00000031894 PogzQ8BZH4 1409 aaKnown RBP15.61■□□□□ 0.09
Clcn1-201ENSMUST00000031894 Neurod1Q60867 357 aa15.6■□□□□ 0.09
Clcn1-201ENSMUST00000031894 Duox2A2AQ99 1517 aa15.6■□□□□ 0.09
Clcn1-201ENSMUST00000031894 Lrriq1Q0P5X1 1673 aa15.58■□□□□ 0.08
Clcn1-201ENSMUST00000031894 Crocc2F6XLV1 1638 aa15.52■□□□□ 0.08
Clcn1-201ENSMUST00000031894 Pabpn1Q8CCS6 302 aaKnown RBP15.52■□□□□ 0.08
Clcn1-201ENSMUST00000031894 Grin2bQ01097 1482 aa15.52■□□□□ 0.08
Clcn1-201ENSMUST00000031894 TnnQ80Z71 1560 aa15.52■□□□□ 0.07
Clcn1-201ENSMUST00000031894 Rad54l2Q99NG0 1466 aa15.5■□□□□ 0.07
Clcn1-201ENSMUST00000031894 Ifnlr1Q8CGK5 535 aa15.5■□□□□ 0.07
Clcn1-201ENSMUST00000031894 Efcab5A0JP43 1406 aa15.48■□□□□ 0.07
Clcn1-201ENSMUST00000031894 Fkbp15Q6P9Q6 1216 aaKnown RBP15.47■□□□□ 0.07
Clcn1-201ENSMUST00000031894 Arhgap27A2AB59 869 aa15.46■□□□□ 0.06
Clcn1-201ENSMUST00000031894 Ift140E9PY46 1464 aa15.45■□□□□ 0.06
Clcn1-201ENSMUST00000031894 Wdr66E9Q743 1299 aa15.44■□□□□ 0.06
Clcn1-201ENSMUST00000031894 PtprkP35822 1457 aa15.43■□□□□ 0.06
Clcn1-201ENSMUST00000031894 Ap3b1Q9Z1T1 1105 aa15.43■□□□□ 0.06
Clcn1-201ENSMUST00000031894 Top2aQ01320 1528 aaKnown RBP15.41■□□□□ 0.06
Clcn1-201ENSMUST00000031894 AknaQ80VW7 1404 aa15.4■□□□□ 0.06
Clcn1-201ENSMUST00000031894 Ttbk1Q6PCN3 1308 aa15.39■□□□□ 0.05
Clcn1-201ENSMUST00000031894 Disp1Q3TDN0 1521 aa15.36■□□□□ 0.05
Clcn1-201ENSMUST00000031894 Shroom4Q1W617 1475 aa15.35■□□□□ 0.05
Clcn1-201ENSMUST00000031894 NrkQ9R0G8 1455 aa15.35■□□□□ 0.05
Clcn1-201ENSMUST00000031894 Ppargc1bQ8VHJ7 1014 aa15.34■□□□□ 0.05
Clcn1-201ENSMUST00000031894 Cc2d2bA0A286YDU8 1405 aa15.31■□□□□ 0.04
Clcn1-201ENSMUST00000031894 Samd9lQ69Z37 1561 aa15.3■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 36.4 ms