RNA–Protein interactions for RNA: ENSMUST00000029053.7

Ptpn1-201, Transcript of Tyrosine-protein phosphatase non-receptor type 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpn1, Length 4,213 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn1-201ENSMUST00000029053 Ccdc102aQ3TMW1 549 aa15.34■□□□□ 0.05
Ptpn1-201ENSMUST00000029053 Jakmip1Q8BVL9 626 aa15.34■□□□□ 0.05
Ptpn1-201ENSMUST00000029053 Smc3Q9CW03 1217 aaKnown RBP15.34■□□□□ 0.05
Ptpn1-201ENSMUST00000029053 Rbm25B2RY56 838 aaKnown RBP15.33■□□□□ 0.05
Ptpn1-201ENSMUST00000029053 Fam184aE9PW83 1143 aa15.33■□□□□ 0.05
Ptpn1-201ENSMUST00000029053 Spag5Q7TME2 1165 aa15.33■□□□□ 0.05
Ptpn1-201ENSMUST00000029053 Mctp1E9PV86 951 aa15.33■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 1700017N19RikA0A087WPJ1 469 aa15.33■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Tpm1P58771 284 aa15.33■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Rtel1Q0VGM9 1203 aa15.33■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Pwp2Q8BU03 919 aaKnown RBP15.32■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Hmox1P14901 289 aa15.32■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Nap1l3Q794H2 544 aa15.32■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Rprd2Q6NXI6 1469 aaKnown RBP15.32■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Zrsr2Q62377 462 aaKnown RBP15.32■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Lrriq1Q0P5X1 1673 aa15.32■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 L1td1Q587J6 782 aaKnown RBP15.32■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Pla2r1Q62028 1487 aa15.31■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Arhgap4B1AUY3 965 aa15.31■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Fan1Q69ZT1 1020 aa15.31■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Cetn4Q8K4K1 168 aa15.31■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Zcchc17Q9ESX4 241 aaKnown RBP15.31■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Exosc9Q9JHI7 438 aaKnown RBP15.31■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Pof1bQ8K4L4 587 aa15.31■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Ccdc96Q9CR92 584 aa15.31■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 ScaperF8VQ70 1398 aaKnown RBP15.31■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Vps18Q8R307 973 aa15.31■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Nrbp1Q99J45 535 aa15.31■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Pnpla2Q8BJ56 486 aa15.3■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Rai14Q9EP71 979 aaKnown RBP15.3■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Clstn2Q9ER65 966 aa15.3■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Zkscan7E9PVW1 718 aa15.3■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Iffo2Q8R2V2 512 aa15.3■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Hnrnpul1Q8VDM6 859 aaKnown RBP15.3■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Magi3Q9EQJ9 1476 aa15.3■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Rsph6aQ8CDR2 708 aa15.29■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Plekhh2Q8C115 1491 aa15.29■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Brd1E9PZ26 1189 aaKnown RBP15.29■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Gm45140A0A0N4SUM8 220 aa15.29■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Paxbp1P58501 919 aa15.29■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Stag3O70576 1240 aa15.28■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Tpm3P21107 285 aaKnown RBP15.28■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Ankrd26Q811D2 1581 aa15.28■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 AU022751B1B0V2 589 aa15.28■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Ube2q2Q8K2Z8 378 aa15.28■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 TnmdQ9EP64 317 aa15.28■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Sh3bp5Q9Z131 463 aa15.28■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Uri1Q3TLD5 531 aa15.28■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 PdiltQ9DAN1 588 aa15.27■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Irx5Q9JKQ4 484 aa15.27■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Mx2Q9WVP9 655 aa15.27■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 EvcP57680 1005 aa15.27■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Swt1Q9DBQ9 907 aa15.27■□□□□ 0.04
Ptpn1-201ENSMUST00000029053 Btn2a2A4QPC6 514 aa15.27■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Def6Q8C2K1 630 aa15.27■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 AatfQ9JKX4 526 aaKnown RBP15.27■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 AknaQ80VW7 1404 aa15.27■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Kif2aP28740 705 aa15.26■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Pmfbp1Q9WVQ0 1022 aa15.26■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Gm1043A0A140LJC2 1431 aa15.26■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Trim30cD3YVI9 513 aa15.26■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 F2rP30558 430 aa15.26■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Usp25P57080 1055 aa15.26■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Slc7a3P70423 618 aa15.26■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Ica1lQ3TY65 431 aa15.26■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Cnpy2Q9QXT0 182 aa15.26■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Hmgn5Q9JL35 406 aa15.26■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Pcf11G3X9Z4 1553 aa15.26■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 SetQ9EQU5 289 aaKnown RBP15.25■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 WrnO09053 1401 aa15.25■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 MvpQ9EQK5 861 aa15.25■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Dhx8A2A4P0 1244 aaKnown RBP15.25■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Cgnl1Q6AW69 1298 aa15.25■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Capn2O08529 700 aa15.25■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Uspl1Q3ULM6 1089 aa15.25■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 KinQ8K339 391 aa15.25■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Ddx27Q921N6 760 aaKnown RBP15.25■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 DonsonQ9QXP4 560 aa15.25■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Smarce1O54941 411 aaKnown RBP15.24■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Tmco3Q8BH01 678 aa15.24■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 FanclQ9CR14 375 aa15.24■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Erc2Q6PH08 957 aa15.24■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Ric3Q8BPM6 367 aa15.24■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Ccdc178Q8CDV0 866 aa15.24■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Kdm4cQ8VCD7 1054 aa15.24■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Ddx41Q91VN6 622 aaKnown RBP15.24■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Pprc1Q6NZN1 1644 aa15.23■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Nup88Q8CEC0 753 aaKnown RBP15.23■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Cyp27a1Q9DBG1 533 aa15.23■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Chaf1aQ9QWF0 911 aa15.23■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Lonp2Q9DBN5 852 aa15.23■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Zeb2Q9R0G7 1215 aa15.23■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Cfap58B2RW38 873 aa15.22■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Ppfia3P60469 1194 aa15.22■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Tpm4Q6IRU2 248 aa15.22■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Birc3O08863 600 aa15.22■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Actn3O88990 900 aaKnown RBP15.22■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 PdcQ9QW08 244 aa15.22■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Cyp46a1Q9WVK8 500 aa15.22■□□□□ 0.03
Ptpn1-201ENSMUST00000029053 Frat2Q8K025 231 aa15.22■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 89.3 ms