RNA–Protein interactions for RNA: ENSMUST00000023154.2

Cldn1-201, Transcript of Claudin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldn1, Length 3,247 nt, Biotype protein coding, Subcellular localisation Tight Junction .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1-201ENSMUST00000023154 Nlgn1Q99K10 843 aa11.73□□□□□ -0.53
Cldn1-201ENSMUST00000023154 Chmp5Q9D7S9 219 aa11.73□□□□□ -0.53
Cldn1-201ENSMUST00000023154 Dennd6aQ8BH65 605 aa11.72□□□□□ -0.53
Cldn1-201ENSMUST00000023154 Znf330Q922H9 316 aa11.72□□□□□ -0.53
Cldn1-201ENSMUST00000023154 Frmpd2A0A140LI67 1392 aa11.72□□□□□ -0.53
Cldn1-201ENSMUST00000023154 Rimbp3Q3V0F0 1606 aa11.72□□□□□ -0.53
Cldn1-201ENSMUST00000023154 Klhdc4Q921I2 584 aa11.72□□□□□ -0.53
Cldn1-201ENSMUST00000023154 Armcx1Q9CX83 456 aa11.72□□□□□ -0.53
Cldn1-201ENSMUST00000023154 Rims2Q9EQZ7 1530 aa11.71□□□□□ -0.53
Cldn1-201ENSMUST00000023154 Dnajc5P60904 198 aa11.71□□□□□ -0.53
Cldn1-201ENSMUST00000023154 Col14a1Q80X19 1797 aa11.71□□□□□ -0.54
Cldn1-201ENSMUST00000023154 Gm6268A2A3U9 297 aa11.71□□□□□ -0.54
Cldn1-201ENSMUST00000023154 Nectin2P32507 530 aa11.71□□□□□ -0.54
Cldn1-201ENSMUST00000023154 EspnQ9ET47 871 aa11.71□□□□□ -0.54
Cldn1-201ENSMUST00000023154 Ap3b2Q9JME5 1082 aa11.71□□□□□ -0.54
Cldn1-201ENSMUST00000023154 Zmym3Q9JLM4 1370 aa11.71□□□□□ -0.54
Cldn1-201ENSMUST00000023154 Gm21190A0A0G2JGJ6 266 aa11.7□□□□□ -0.54
Cldn1-201ENSMUST00000023154 Nutm1Q8BHP2 1126 aa11.7□□□□□ -0.54
Cldn1-201ENSMUST00000023154 Tns3Q5SSZ5 1440 aa11.7□□□□□ -0.54
Cldn1-201ENSMUST00000023154 ChgaP26339 463 aaKnown RBP11.69□□□□□ -0.54
Cldn1-201ENSMUST00000023154 Cabp4Q8VHC5 271 aa11.69□□□□□ -0.54
Cldn1-201ENSMUST00000023154 Nsd3Q6P2L6 1439 aa11.69□□□□□ -0.54
Cldn1-201ENSMUST00000023154 Vamp4O70480 141 aa11.69□□□□□ -0.54
Cldn1-201ENSMUST00000023154 G3bp1P97855 465 aaKnown RBP11.69□□□□□ -0.54
Cldn1-201ENSMUST00000023154 Maco1Q7TQE6 664 aaKnown RBP11.69□□□□□ -0.54
Cldn1-201ENSMUST00000023154 Ipo9Q91YE6 1041 aa11.69□□□□□ -0.54
Cldn1-201ENSMUST00000023154 Stk31Q99MW1 1018 aa11.68□□□□□ -0.54
Cldn1-201ENSMUST00000023154 Tet3Q8BG87 1668 aa11.68□□□□□ -0.54
Cldn1-201ENSMUST00000023154 Ccdc171E9Q1U1 1324 aa11.68□□□□□ -0.54
Cldn1-201ENSMUST00000023154 NudcO35685 332 aaKnown RBP11.67□□□□□ -0.54
Cldn1-201ENSMUST00000023154 Plekhm2Q80TQ5 1018 aa11.67□□□□□ -0.54
Cldn1-201ENSMUST00000023154 Gnai1B2RSH2 354 aa11.67□□□□□ -0.54
Cldn1-201ENSMUST00000023154 U2surpQ6NV83 1029 aaKnown RBP11.67□□□□□ -0.54
Cldn1-201ENSMUST00000023154 Tmco5bQ80X59 307 aa11.67□□□□□ -0.54
Cldn1-201ENSMUST00000023154 Usp16Q99LG0 825 aa11.67□□□□□ -0.54
Cldn1-201ENSMUST00000023154 Gnai3Q9DC51 354 aa11.67□□□□□ -0.54
Cldn1-201ENSMUST00000023154 Snap23O09044 210 aa11.66□□□□□ -0.54
Cldn1-201ENSMUST00000023154 Eya1P97767 591 aa11.66□□□□□ -0.54
Cldn1-201ENSMUST00000023154 Ccne1Q61457 408 aa11.66□□□□□ -0.54
Cldn1-201ENSMUST00000023154 Tmem132eQ6IEE6 982 aa11.66□□□□□ -0.54
Cldn1-201ENSMUST00000023154 Tmem2Q5FWI3 1383 aa11.65□□□□□ -0.54
Cldn1-201ENSMUST00000023154 Phlpp1Q8CHE4 1687 aa11.65□□□□□ -0.54
Cldn1-201ENSMUST00000023154 Slit2Q9R1B9 1521 aa11.65□□□□□ -0.54
Cldn1-201ENSMUST00000023154 Q3UPC7 1272 aa11.65□□□□□ -0.54
Cldn1-201ENSMUST00000023154 TmpoQ61033 693 aaKnown RBP11.65□□□□□ -0.54
Cldn1-201ENSMUST00000023154 Cluap1Q8R3P7 413 aa11.65□□□□□ -0.54
Cldn1-201ENSMUST00000023154 AU019823E9PUQ3 292 aa11.64□□□□□ -0.55
Cldn1-201ENSMUST00000023154 Hoxc9P09633 260 aa11.64□□□□□ -0.55
Cldn1-201ENSMUST00000023154 KarsQ99MN1 595 aaKnown RBP11.64□□□□□ -0.55
Cldn1-201ENSMUST00000023154 Pnmal2G3X9N3 661 aa11.64□□□□□ -0.55
Cldn1-201ENSMUST00000023154 Unc13bQ9Z1N9 1602 aa11.64□□□□□ -0.55
Cldn1-201ENSMUST00000023154 Ptpn23Q6PB44 1692 aa11.63□□□□□ -0.55
Cldn1-201ENSMUST00000023154 4930567H17RikQ3V0K5 233 aa11.63□□□□□ -0.55
Cldn1-201ENSMUST00000023154 Iqcf3Q9D498 203 aa11.63□□□□□ -0.55
Cldn1-201ENSMUST00000023154 Nrxn3Q6P9K9 1571 aa11.62□□□□□ -0.55
Cldn1-201ENSMUST00000023154 Prim1P20664 417 aa11.62□□□□□ -0.55
Cldn1-201ENSMUST00000023154 Ggnbp2Q5SV77 696 aa11.62□□□□□ -0.55
Cldn1-201ENSMUST00000023154 Robo1O89026 1612 aa11.62□□□□□ -0.55
Cldn1-201ENSMUST00000023154 Larp1bA0A0A6YXJ7 370 aaKnown RBP11.62□□□□□ -0.55
Cldn1-201ENSMUST00000023154 Pibf1E9Q6K3 756 aa11.62□□□□□ -0.55
Cldn1-201ENSMUST00000023154 Ahnak2E9PYB0 1738 aaKnown RBP11.62□□□□□ -0.55
Cldn1-201ENSMUST00000023154 Adgrb1Q3UHD1 1582 aa11.62□□□□□ -0.55
Cldn1-201ENSMUST00000023154 Aldh1l1Q8R0Y6 902 aa11.62□□□□□ -0.55
Cldn1-201ENSMUST00000023154 Nfat5Q9WV30 1534 aa11.61□□□□□ -0.55
Cldn1-201ENSMUST00000023154 1700019A02RikA0A087WPV9 146 aa11.61□□□□□ -0.55
Cldn1-201ENSMUST00000023154 Trpm3Q5F4S9 1721 aa11.61□□□□□ -0.55
Cldn1-201ENSMUST00000023154 Ncapd2Q8K2Z4 1392 aa11.6□□□□□ -0.55
Cldn1-201ENSMUST00000023154 AampJ3QN89 436 aa11.6□□□□□ -0.55
Cldn1-201ENSMUST00000023154 Aplp1Q03157 653 aa11.6□□□□□ -0.55
Cldn1-201ENSMUST00000023154 Slain2Q8CI08 581 aa11.6□□□□□ -0.55
Cldn1-201ENSMUST00000023154 Aifm3Q3TY86 605 aa11.6□□□□□ -0.55
Cldn1-201ENSMUST00000023154 Sos1Q62245 1319 aa11.59□□□□□ -0.55
Cldn1-201ENSMUST00000023154 CanxP35564 591 aaKnown RBP11.59□□□□□ -0.55
Cldn1-201ENSMUST00000023154 Trim30dE9PWL0 497 aa11.59□□□□□ -0.55
Cldn1-201ENSMUST00000023154 Arfgef2A2A5R2 1792 aa11.59□□□□□ -0.55
Cldn1-201ENSMUST00000023154 Evi5lH3BKQ3 813 aa11.58□□□□□ -0.56
Cldn1-201ENSMUST00000023154 Fyb1O35601 819 aa11.58□□□□□ -0.56
Cldn1-201ENSMUST00000023154 MarsQ68FL6 902 aaKnown RBP11.58□□□□□ -0.56
Cldn1-201ENSMUST00000023154 Ano8Q6PB70 1060 aa11.58□□□□□ -0.56
Cldn1-201ENSMUST00000023154 MvpQ9EQK5 861 aa11.58□□□□□ -0.56
Cldn1-201ENSMUST00000023154 Wdr17E9Q271 1322 aa11.58□□□□□ -0.56
Cldn1-201ENSMUST00000023154 ArxO35085 564 aa11.58□□□□□ -0.56
Cldn1-201ENSMUST00000023154 Scn4aQ9ER60 1841 aa11.58□□□□□ -0.56
Cldn1-201ENSMUST00000023154 Kif24Q6NWW5 1356 aa11.58□□□□□ -0.56
Cldn1-201ENSMUST00000023154 Ak7Q9D2H2 614 aa11.58□□□□□ -0.56
Cldn1-201ENSMUST00000023154 Nkx1-2P42580 305 aa11.57□□□□□ -0.56
Cldn1-201ENSMUST00000023154 Ccdc27Q3V036 639 aa11.57□□□□□ -0.56
Cldn1-201ENSMUST00000023154 Ankrd44B2RXR6 993 aa11.57□□□□□ -0.56
Cldn1-201ENSMUST00000023154 Ccdc183A2AJB1 534 aa11.56□□□□□ -0.56
Cldn1-201ENSMUST00000023154 Ppp2r3aB2RXC8 1150 aa11.56□□□□□ -0.56
Cldn1-201ENSMUST00000023154 Amotl2Q8K371 772 aa11.56□□□□□ -0.56
Cldn1-201ENSMUST00000023154 Chl1P70232 1209 aa11.56□□□□□ -0.56
Cldn1-201ENSMUST00000023154 Ddx17Q501J6 650 aaKnown RBP11.56□□□□□ -0.56
Cldn1-201ENSMUST00000023154 Dnajc10Q9DC23 793 aa11.56□□□□□ -0.56
Cldn1-201ENSMUST00000023154 Ncoa4Q5U4H9 625 aa11.56□□□□□ -0.56
Cldn1-201ENSMUST00000023154 Ric3Q8BPM6 367 aa11.56□□□□□ -0.56
Cldn1-201ENSMUST00000023154 TimelessQ9R1X4 1197 aa11.56□□□□□ -0.56
Cldn1-201ENSMUST00000023154 Siglec1Q62230 1695 aa11.55□□□□□ -0.56
Cldn1-201ENSMUST00000023154 Col18a1P39061 1774 aa11.55□□□□□ -0.56
Cldn1-201ENSMUST00000023154 Rtf1A2AQ19 715 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 11.4 ms