RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Zmym3Q9JLM4 1370 aa26,27■■□□□ 1,8
Trim47-201ENSMUST00000021120 Usp19Q3UJD6 1360 aa26,27■■□□□ 1,8
Trim47-201ENSMUST00000021120 Map4k4P97820 1233 aaKnown RBP26,26■■□□□ 1,79
Trim47-201ENSMUST00000021120 Ano8Q6PB70 1060 aa26,26■■□□□ 1,79
Trim47-201ENSMUST00000021120 Rsph6aQ8CDR2 708 aa26,26■■□□□ 1,79
Trim47-201ENSMUST00000021120 Nfat5Q9WV30 1534 aa26,25■■□□□ 1,79
Trim47-201ENSMUST00000021120 Tet3Q8BG87 1668 aa26,25■■□□□ 1,79
Trim47-201ENSMUST00000021120 Dzip1Q8BMD2 852 aa26,24■■□□□ 1,79
Trim47-201ENSMUST00000021120 Kcnh5Q920E3 988 aa26,24■■□□□ 1,79
Trim47-201ENSMUST00000021120 PtprvP70289 1705 aa26,24■■□□□ 1,79
Trim47-201ENSMUST00000021120 Kdm2bQ6P1G2 1309 aa26,24■■□□□ 1,79
Trim47-201ENSMUST00000021120 Bcl11bQ99PV8 884 aa26,24■■□□□ 1,79
Trim47-201ENSMUST00000021120 PalmQ9Z0P4 383 aa26,23■■□□□ 1,79
Trim47-201ENSMUST00000021120 Gimap5Q8BWF2 308 aa26,22■■□□□ 1,79
Trim47-201ENSMUST00000021120 CrbnQ8C7D2 445 aa26,22■■□□□ 1,79
Trim47-201ENSMUST00000021120 Robo1O89026 1612 aa26,22■■□□□ 1,79
Trim47-201ENSMUST00000021120 Rad21Q61550 635 aaKnown RBP26,22■■□□□ 1,79
Trim47-201ENSMUST00000021120 Rad17Q6NXW6 688 aa26,21■■□□□ 1,79
Trim47-201ENSMUST00000021120 TatQ8QZR1 454 aa26,21■■□□□ 1,79
Trim47-201ENSMUST00000021120 Atp7bQ64446 1462 aa26,21■■□□□ 1,79
Trim47-201ENSMUST00000021120 Parp14Q2EMV9 1817 aa26,21■■□□□ 1,79
Trim47-201ENSMUST00000021120 Eif4a2P10630 407 aa26,2■■□□□ 1,79
Trim47-201ENSMUST00000021120 Spef2Q8C9J3 1734 aa26,2■■□□□ 1,78
Trim47-201ENSMUST00000021120 PaskQ8CEE6 1383 aa26,2■■□□□ 1,78
Trim47-201ENSMUST00000021120 Mapk8ip3Q9ESN9 1337 aa26,18■■□□□ 1,78
Trim47-201ENSMUST00000021120 Abca15E9PWH4 1668 aa26,18■■□□□ 1,78
Trim47-201ENSMUST00000021120 Hoxc9P09633 260 aa26,18■■□□□ 1,78
Trim47-201ENSMUST00000021120 Fmnl2A2APV2 1086 aa26,17■■□□□ 1,78
Trim47-201ENSMUST00000021120 Uspl1Q3ULM6 1089 aa26,17■■□□□ 1,78
Trim47-201ENSMUST00000021120 Atp10bB1AWN4 1474 aa26,17■■□□□ 1,78
Trim47-201ENSMUST00000021120 Apaf1O88879 1249 aa26,16■■□□□ 1,78
Trim47-201ENSMUST00000021120 Fchsd2Q3USJ8 740 aa26,15■■□□□ 1,78
Trim47-201ENSMUST00000021120 TnrQ8BYI9 1358 aa26,14■■□□□ 1,78
Trim47-201ENSMUST00000021120 Cadps2Q8BYR5 1297 aa26,14■■□□□ 1,78
Trim47-201ENSMUST00000021120 Dnajc10Q9DC23 793 aa26,14■■□□□ 1,78
Trim47-201ENSMUST00000021120 Zfp777B9EKF4 885 aa26,14■■□□□ 1,77
Trim47-201ENSMUST00000021120 Tmem132eQ6IEE6 982 aa26,14■■□□□ 1,77
Trim47-201ENSMUST00000021120 Ccne1Q61457 408 aa26,12■■□□□ 1,77
Trim47-201ENSMUST00000021120 Speer4f1Q9D5Q6 258 aa26,12■■□□□ 1,77
Trim47-201ENSMUST00000021120 EspnQ9ET47 871 aa26,12■■□□□ 1,77
Trim47-201ENSMUST00000021120 Nid2O88322 1403 aa26,12■■□□□ 1,77
Trim47-201ENSMUST00000021120 Znf541Q0GGX2 1363 aa26,12■■□□□ 1,77
Trim47-201ENSMUST00000021120 Bcl9lQ67FY2 1494 aa26,11■■□□□ 1,77
Trim47-201ENSMUST00000021120 MpripP97434 1024 aa26,11■■□□□ 1,77
Trim47-201ENSMUST00000021120 Ptpn23Q6PB44 1692 aa26,1■■□□□ 1,77
Trim47-201ENSMUST00000021120 Gm21698A0A087WQP8 267 aa26,1■■□□□ 1,77
Trim47-201ENSMUST00000021120 Gm21671G3UY31 267 aa26,1■■□□□ 1,77
Trim47-201ENSMUST00000021120 CanxP35564 591 aaKnown RBP26,1■■□□□ 1,77
Trim47-201ENSMUST00000021120 Plekhh1Q80TI1 1356 aa26,1■■□□□ 1,77
Trim47-201ENSMUST00000021120 Hspa1lP16627 641 aa26,08■■□□□ 1,77
Trim47-201ENSMUST00000021120 Marf1Q8BJ34 1730 aaKnown RBP26,08■■□□□ 1,77
Trim47-201ENSMUST00000021120 Rwdd1Q9CQK7 243 aa26,07■■□□□ 1,76
Trim47-201ENSMUST00000021120 Tom1O88746 492 aa26,06■■□□□ 1,76
Trim47-201ENSMUST00000021120 Mre11Q61216 706 aa26,06■■□□□ 1,76
Trim47-201ENSMUST00000021120 Ralbp1Q62172 648 aa26,06■■□□□ 1,76
Trim47-201ENSMUST00000021120 Zfp142G5E869 1843 aa26,06■■□□□ 1,76
Trim47-201ENSMUST00000021120 DaxxO35613 739 aa26,06■■□□□ 1,76
Trim47-201ENSMUST00000021120 NudcO35685 332 aaKnown RBP26,06■■□□□ 1,76
Trim47-201ENSMUST00000021120 Ecm2Q5FW85 670 aa26,06■■□□□ 1,76
Trim47-201ENSMUST00000021120 Neurod2Q62414 383 aa26,06■■□□□ 1,76
Trim47-201ENSMUST00000021120 Cavin4A2AMM0 362 aa26,05■■□□□ 1,76
Trim47-201ENSMUST00000021120 Eya1P97767 591 aa26,05■■□□□ 1,76
Trim47-201ENSMUST00000021120 Mcm10Q0VBD2 885 aa26,04■■□□□ 1,76
Trim47-201ENSMUST00000021120 Q4VA45 678 aa26,04■■□□□ 1,76
Trim47-201ENSMUST00000021120 B4galnt3Q6L8S8 986 aa26,04■■□□□ 1,76
Trim47-201ENSMUST00000021120 Ciz1Q8VEH2 845 aa26,04■■□□□ 1,76
Trim47-201ENSMUST00000021120 Sart3Q9JLI8 962 aaKnown RBP26,04■■□□□ 1,76
Trim47-201ENSMUST00000021120 Plin1Q8CGN5 517 aa26,04■■□□□ 1,76
Trim47-201ENSMUST00000021120 Nol11Q8BJW5 723 aaKnown RBP26,03■■□□□ 1,76
Trim47-201ENSMUST00000021120 Dnai1Q8C0M8 701 aa26,03■■□□□ 1,76
Trim47-201ENSMUST00000021120 HdgfP51859 237 aaKnown RBP26,02■■□□□ 1,76
Trim47-201ENSMUST00000021120 ZgpatQ8VDM1 511 aa26,02■■□□□ 1,76
Trim47-201ENSMUST00000021120 Stk31Q99MW1 1018 aa26,02■■□□□ 1,76
Trim47-201ENSMUST00000021120 Card10P58660 1021 aa26,02■■□□□ 1,76
Trim47-201ENSMUST00000021120 Smc5Q8CG46 1101 aaKnown RBP26,02■■□□□ 1,76
Trim47-201ENSMUST00000021120 Kdm6aO70546 1401 aa26,01■■□□□ 1,75
Trim47-201ENSMUST00000021120 Dusp27Q148W8 1138 aa26,01■■□□□ 1,75
Trim47-201ENSMUST00000021120 Ncbp3Q8BZR9 615 aaKnown RBP26■■□□□ 1,75
Trim47-201ENSMUST00000021120 Acsbg1Q99PU5 721 aa26■■□□□ 1,75
Trim47-201ENSMUST00000021120 Slit2Q9R1B9 1521 aa26■■□□□ 1,75
Trim47-201ENSMUST00000021120 Uhrf1bp1B2KF50 1429 aa26■■□□□ 1,75
Trim47-201ENSMUST00000021120 Ppm1gQ61074 542 aa26■■□□□ 1,75
Trim47-201ENSMUST00000021120 Ccdc30Q8BVF4 654 aa26■■□□□ 1,75
Trim47-201ENSMUST00000021120 Chmp5Q9D7S9 219 aa26■■□□□ 1,75
Trim47-201ENSMUST00000021120 Kcnn1Q9EQR3 537 aa26■■□□□ 1,75
Trim47-201ENSMUST00000021120 4933416C03RikQ3V063 378 aa25,99■■□□□ 1,75
Trim47-201ENSMUST00000021120 Amotl2Q8K371 772 aa25,99■■□□□ 1,75
Trim47-201ENSMUST00000021120 Pdlim2Q8R1G6 349 aa25,98■■□□□ 1,75
Trim47-201ENSMUST00000021120 Ybx3Q9JKB3 361 aaKnown RBP25,98■■□□□ 1,75
Trim47-201ENSMUST00000021120 Cabp2Q9JLK4 216 aa25,97■■□□□ 1,75
Trim47-201ENSMUST00000021120 Cdhr2E9Q7P9 1308 aa25,96■■□□□ 1,75
Trim47-201ENSMUST00000021120 Atxn3Q9CVD2 355 aa25,95■■□□□ 1,75
Trim47-201ENSMUST00000021120 Swt1Q9DBQ9 907 aa25,95■■□□□ 1,74
Trim47-201ENSMUST00000021120 Txnrd1Q9JMH6 613 aa25,95■■□□□ 1,74
Trim47-201ENSMUST00000021120 Qtrt2B8ZXI1 415 aa25,93■■□□□ 1,74
Trim47-201ENSMUST00000021120 Smim5Q8BT42 78 aa25,93■■□□□ 1,74
Trim47-201ENSMUST00000021120 Tmc1Q8R4P5 757 aa25,93■■□□□ 1,74
Trim47-201ENSMUST00000021120 Rab11fip3Q8CHD8 1047 aa25,91■■□□□ 1,74
Trim47-201ENSMUST00000021120 OptnQ8K3K8 584 aa25,91■■□□□ 1,74
Trim47-201ENSMUST00000021120 TkfcQ8VC30 578 aa25,91■■□□□ 1,74
Retrieved 100 of 22,080 RNA–protein pairs in 11,2 ms