RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 VgfQ0VGU4 617 aa12.69□□□□□ -0.38
Clip3-201ENSMUST00000014065 Cgnl1Q6AW69 1298 aa12.69□□□□□ -0.38
Clip3-201ENSMUST00000014065 Rims1Q99NE5 1463 aa12.69□□□□□ -0.38
Clip3-201ENSMUST00000014065 Zkscan1Q8BGS3 561 aaKnown RBP12.68□□□□□ -0.38
Clip3-201ENSMUST00000014065 Ythdc2B2RR83 1445 aaKnown RBP12.68□□□□□ -0.38
Clip3-201ENSMUST00000014065 Tmx3Q8BXZ1 456 aa12.68□□□□□ -0.38
Clip3-201ENSMUST00000014065 Efcab6Q6P1E8 1516 aa12.68□□□□□ -0.38
Clip3-201ENSMUST00000014065 Prdm2A2A7B5 1709 aaKnown RBP12.68□□□□□ -0.38
Clip3-201ENSMUST00000014065 Myom1Q62234 1667 aaKnown RBP12.68□□□□□ -0.38
Clip3-201ENSMUST00000014065 Skint5A7XUY5 1461 aa12.68□□□□□ -0.38
Clip3-201ENSMUST00000014065 Syce3B5KM66 88 aa12.67□□□□□ -0.38
Clip3-201ENSMUST00000014065 Lmod3E9QA62 571 aa12.67□□□□□ -0.38
Clip3-201ENSMUST00000014065 Rbm27Q5SFM8 1060 aaKnown RBP12.67□□□□□ -0.38
Clip3-201ENSMUST00000014065 Isy1Q69ZQ2 285 aaKnown RBP12.67□□□□□ -0.38
Clip3-201ENSMUST00000014065 Fchsd2Q3USJ8 740 aa12.67□□□□□ -0.38
Clip3-201ENSMUST00000014065 Ggnbp2Q5SV77 696 aa12.67□□□□□ -0.38
Clip3-201ENSMUST00000014065 Nos1Q9Z0J4 1429 aa12.66□□□□□ -0.38
Clip3-201ENSMUST00000014065 Cpa2Q504N0 417 aa12.66□□□□□ -0.38
Clip3-201ENSMUST00000014065 Gdpd2Q9ESM6 539 aa12.66□□□□□ -0.38
Clip3-201ENSMUST00000014065 Zfyve16Q80U44 1528 aa12.66□□□□□ -0.38
Clip3-201ENSMUST00000014065 Dhx16G3X8X0 1044 aaKnown RBP12.66□□□□□ -0.38
Clip3-201ENSMUST00000014065 Tnnt1O88346 262 aa12.66□□□□□ -0.38
Clip3-201ENSMUST00000014065 Stk31Q99MW1 1018 aa12.66□□□□□ -0.38
Clip3-201ENSMUST00000014065 Znf518aB2RRF6 1478 aaKnown RBP12.66□□□□□ -0.38
Clip3-201ENSMUST00000014065 Tmem131lQ3U3D7 1597 aa12.65□□□□□ -0.38
Clip3-201ENSMUST00000014065 PaskQ8CEE6 1383 aa12.65□□□□□ -0.38
Clip3-201ENSMUST00000014065 Rab11fip3Q8CHD8 1047 aa12.65□□□□□ -0.38
Clip3-201ENSMUST00000014065 Ush1cQ9ES64 910 aa12.65□□□□□ -0.38
Clip3-201ENSMUST00000014065 Ptch1Q61115 1434 aa12.65□□□□□ -0.38
Clip3-201ENSMUST00000014065 Iqgap3F8VQ29 1632 aa12.65□□□□□ -0.38
Clip3-201ENSMUST00000014065 Fndc1E9Q043 1732 aa12.65□□□□□ -0.38
Clip3-201ENSMUST00000014065 Pdia3P27773 505 aaKnown RBP12.65□□□□□ -0.38
Clip3-201ENSMUST00000014065 Prkar2bP31324 416 aa12.65□□□□□ -0.38
Clip3-201ENSMUST00000014065 Pcmtd1P59913 357 aa12.65□□□□□ -0.38
Clip3-201ENSMUST00000014065 Kdm4cQ8VCD7 1054 aa12.65□□□□□ -0.38
Clip3-201ENSMUST00000014065 Cyp46a1Q9WVK8 500 aa12.65□□□□□ -0.38
Clip3-201ENSMUST00000014065 Pik3r4Q8VD65 1358 aa12.64□□□□□ -0.39
Clip3-201ENSMUST00000014065 Gadd45bP22339 160 aa12.64□□□□□ -0.39
Clip3-201ENSMUST00000014065 Fam13aQ8BGI4 693 aa12.64□□□□□ -0.39
Clip3-201ENSMUST00000014065 Uggt1Q6P5E4 1551 aa12.64□□□□□ -0.39
Clip3-201ENSMUST00000014065 CenppQ9CZ92 286 aa12.64□□□□□ -0.39
Clip3-201ENSMUST00000014065 Bcar3Q9QZK2 820 aa12.64□□□□□ -0.39
Clip3-201ENSMUST00000014065 Cdk5rap2Q8K389 1822 aa12.63□□□□□ -0.39
Clip3-201ENSMUST00000014065 Ppp6r3Q922D4 844 aa12.63□□□□□ -0.39
Clip3-201ENSMUST00000014065 Gcc1Q9D4H2 778 aa12.63□□□□□ -0.39
Clip3-201ENSMUST00000014065 4931400O07RikQ9D4M5 137 aa12.63□□□□□ -0.39
Clip3-201ENSMUST00000014065 Hmox1P14901 289 aa12.63□□□□□ -0.39
Clip3-201ENSMUST00000014065 Pank2Q3U4S0 443 aa12.63□□□□□ -0.39
Clip3-201ENSMUST00000014065 Plppr3Q7TPB0 716 aa12.63□□□□□ -0.39
Clip3-201ENSMUST00000014065 Asxl2Q8BZ32 1370 aa12.63□□□□□ -0.39
Clip3-201ENSMUST00000014065 Becn1O88597 448 aa12.62□□□□□ -0.39
Clip3-201ENSMUST00000014065 OvosQ3UU35 1456 aa12.62□□□□□ -0.39
Clip3-201ENSMUST00000014065 Nucb1Q02819 459 aaKnown RBP12.62□□□□□ -0.39
Clip3-201ENSMUST00000014065 Tshz3Q8CGV9 1081 aa12.62□□□□□ -0.39
Clip3-201ENSMUST00000014065 Gli2Q0VGT2 1544 aa12.61□□□□□ -0.39
Clip3-201ENSMUST00000014065 Ppp1r15aP17564 657 aa12.61□□□□□ -0.39
Clip3-201ENSMUST00000014065 Q3TQI7 289 aaKnown RBP12.61□□□□□ -0.39
Clip3-201ENSMUST00000014065 Adgrl3Q80TS3 1537 aa12.61□□□□□ -0.39
Clip3-201ENSMUST00000014065 Filip1lQ6P6L0 1131 aa12.61□□□□□ -0.39
Clip3-201ENSMUST00000014065 Gripap1Q8VD04 806 aa12.61□□□□□ -0.39
Clip3-201ENSMUST00000014065 Sytl4Q9R0Q1 673 aa12.61□□□□□ -0.39
Clip3-201ENSMUST00000014065 Rtf1A2AQ19 715 aaKnown RBP12.6□□□□□ -0.39
Clip3-201ENSMUST00000014065 Sox12Q04890 314 aa12.6□□□□□ -0.39
Clip3-201ENSMUST00000014065 Prune1Q8BIW1 454 aa12.6□□□□□ -0.39
Clip3-201ENSMUST00000014065 Hfm1D3Z4R1 1434 aa12.6□□□□□ -0.39
Clip3-201ENSMUST00000014065 Anapc15-psA0A140T8L6 141 aa12.6□□□□□ -0.39
Clip3-201ENSMUST00000014065 Txndc2Q6P902 515 aa12.6□□□□□ -0.39
Clip3-201ENSMUST00000014065 Erc2Q6PH08 957 aa12.6□□□□□ -0.39
Clip3-201ENSMUST00000014065 Afap1Q80YS6 731 aa12.6□□□□□ -0.39
Clip3-201ENSMUST00000014065 Gm9992B2RWK3 458 aa12.6□□□□□ -0.39
Clip3-201ENSMUST00000014065 Casc1Q6TDU8 730 aa12.6□□□□□ -0.39
Clip3-201ENSMUST00000014065 Unc93aQ710D3 458 aa12.6□□□□□ -0.39
Clip3-201ENSMUST00000014065 NexnQ7TPW1 607 aa12.6□□□□□ -0.39
Clip3-201ENSMUST00000014065 Cyp27a1Q9DBG1 533 aa12.6□□□□□ -0.39
Clip3-201ENSMUST00000014065 Adgrb3Q80ZF8 1522 aa12.6□□□□□ -0.39
Clip3-201ENSMUST00000014065 Tpm2P58774 284 aa12.59□□□□□ -0.39
Clip3-201ENSMUST00000014065 Psme1P97371 249 aa12.59□□□□□ -0.39
Clip3-201ENSMUST00000014065 Sv2bQ8BG39 683 aa12.59□□□□□ -0.39
Clip3-201ENSMUST00000014065 EngaseQ8BX80 734 aa12.59□□□□□ -0.39
Clip3-201ENSMUST00000014065 Naip7Q9JIB3 1402 aa12.59□□□□□ -0.39
Clip3-201ENSMUST00000014065 Babam1Q3UI43 333 aa12.59□□□□□ -0.39
Clip3-201ENSMUST00000014065 Aldh8a1Q8BH00 487 aa12.59□□□□□ -0.39
Clip3-201ENSMUST00000014065 Ncbp3Q8BZR9 615 aaKnown RBP12.59□□□□□ -0.39
Clip3-201ENSMUST00000014065 Prrc2bQ7TPM1 1486 aaKnown RBP12.59□□□□□ -0.39
Clip3-201ENSMUST00000014065 Zfp777B9EKF4 885 aa12.59□□□□□ -0.39
Clip3-201ENSMUST00000014065 PtprtQ99M80 1454 aa12.58□□□□□ -0.4
Clip3-201ENSMUST00000014065 ImpactO55091 318 aa12.58□□□□□ -0.4
Clip3-201ENSMUST00000014065 Kif4P33174 1231 aa12.58□□□□□ -0.4
Clip3-201ENSMUST00000014065 Mcm2P97310 904 aa12.58□□□□□ -0.4
Clip3-201ENSMUST00000014065 Srgap3Q812A2 1099 aa12.58□□□□□ -0.4
Clip3-201ENSMUST00000014065 MccE9PWI3 1003 aa12.58□□□□□ -0.4
Clip3-201ENSMUST00000014065 Jakmip1Q8BVL9 626 aa12.58□□□□□ -0.4
Clip3-201ENSMUST00000014065 Fez1Q8K0X8 392 aa12.58□□□□□ -0.4
Clip3-201ENSMUST00000014065 Trpm1Q2TV84 1622 aa12.58□□□□□ -0.4
Clip3-201ENSMUST00000014065 Snap23O09044 210 aa12.57□□□□□ -0.4
Clip3-201ENSMUST00000014065 Trim28Q62318 834 aa12.57□□□□□ -0.4
Clip3-201ENSMUST00000014065 Prex1Q69ZK0 1650 aa12.57□□□□□ -0.4
Clip3-201ENSMUST00000014065 Map3k19E9Q3S4 1311 aa12.57□□□□□ -0.4
Clip3-201ENSMUST00000014065 Prim1P20664 417 aa12.57□□□□□ -0.4
Clip3-201ENSMUST00000014065 Rsph6aQ8CDR2 708 aa12.57□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms