RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 FAM153BP0C7A2 387 aa14.59□□□□□ -0.07
LINC00339-208ENST00000634934 AOC1P19801 751 aa14.59□□□□□ -0.07
LINC00339-208ENST00000634934 FDFT1P37268 417 aa14.59□□□□□ -0.07
LINC00339-208ENST00000634934 ELAVL3Q14576 367 aaKnown RBP14.59□□□□□ -0.07
LINC00339-208ENST00000634934 FAM153CQ494X1 144 aa14.59□□□□□ -0.07
LINC00339-208ENST00000634934 RALGPS1Q5JS13 557 aa14.59□□□□□ -0.07
LINC00339-208ENST00000634934 KIAA1211LQ6NV74 962 aa14.59□□□□□ -0.07
LINC00339-208ENST00000634934 NCEH1Q6PIU2 408 aa14.59□□□□□ -0.07
LINC00339-208ENST00000634934 FOXR1Q6PIV2 292 aa14.59□□□□□ -0.07
LINC00339-208ENST00000634934 PRPF39Q86UA1 669 aaKnown RBP14.59□□□□□ -0.07
LINC00339-208ENST00000634934 PAF1Q8N7H5 531 aa14.59□□□□□ -0.07
LINC00339-208ENST00000634934 BCAS4Q8TDM0 211 aa14.59□□□□□ -0.07
LINC00339-208ENST00000634934 OXNAD1Q96HP4 312 aaPredicted RBP14.59□□□□□ -0.07
LINC00339-208ENST00000634934 ERP44Q9BS26 406 aa14.59□□□□□ -0.07
LINC00339-208ENST00000634934 ATP13A3Q9H7F0 1226 aa14.59□□□□□ -0.07
LINC00339-208ENST00000634934 IL36AQ9UHA7 158 aa14.59□□□□□ -0.07
LINC00339-208ENST00000634934 FAM153AQ9UHL3 310 aa14.59□□□□□ -0.07
LINC00339-208ENST00000634934 MMP17Q9ULZ9 603 aa14.59□□□□□ -0.07
LINC00339-208ENST00000634934 UTP11Q9Y3A2 253 aaKnown RBP14.59□□□□□ -0.07
LINC00339-208ENST00000634934 USP34Q70CQ2 3546 aa14.59□□□□□ -0.07
LINC00339-208ENST00000634934 MUC22E2RYF6 1773 aaPredicted RBP14.58□□□□□ -0.08
LINC00339-208ENST00000634934 ATG13O75143 517 aa14.58□□□□□ -0.08
LINC00339-208ENST00000634934 PPFIA2O75334 1257 aa14.58□□□□□ -0.08
LINC00339-208ENST00000634934 ANXA9O76027 345 aa14.58□□□□□ -0.08
LINC00339-208ENST00000634934 PIGNO95427 931 aa14.58□□□□□ -0.08
LINC00339-208ENST00000634934 MMP2P08253 660 aa14.58□□□□□ -0.08
LINC00339-208ENST00000634934 COL9A1P20849 921 aa14.58□□□□□ -0.08
LINC00339-208ENST00000634934 MDH1P40925 334 aaKnown RBP14.58□□□□□ -0.08
LINC00339-208ENST00000634934 GEMP55040 296 aa14.58□□□□□ -0.08
LINC00339-208ENST00000634934 BCL2L1Q07817 233 aa14.58□□□□□ -0.08
LINC00339-208ENST00000634934 CAMK2GQ13555 558 aaPredicted RBP14.58□□□□□ -0.08
LINC00339-208ENST00000634934 PCSK7Q16549 785 aa14.58□□□□□ -0.08
LINC00339-208ENST00000634934 ARSIQ5FYB1 569 aa14.58□□□□□ -0.08
LINC00339-208ENST00000634934 KDELC2Q7Z4H8 507 aa14.58□□□□□ -0.08
LINC00339-208ENST00000634934 CAMK1DQ8IU85 385 aa14.58□□□□□ -0.08
LINC00339-208ENST00000634934 IPMKQ8NFU5 416 aa14.58□□□□□ -0.08
LINC00339-208ENST00000634934 PDCD6IPQ8WUM4 868 aaKnown RBP14.58□□□□□ -0.08
LINC00339-208ENST00000634934 NSMCE3Q96MG7 304 aa14.58□□□□□ -0.08
LINC00339-208ENST00000634934 PPP1R2P1Q96PQ5 205 aa14.58□□□□□ -0.08
LINC00339-208ENST00000634934 FAM129BQ96TA1 746 aa14.58□□□□□ -0.08
LINC00339-208ENST00000634934 GORASP1Q9BQQ3 440 aa14.58□□□□□ -0.08
LINC00339-208ENST00000634934 MLPHQ9BV36 600 aaPredicted RBP14.58□□□□□ -0.08
LINC00339-208ENST00000634934 DPH5Q9H2P9 285 aa14.58□□□□□ -0.08
LINC00339-208ENST00000634934 AAR2Q9Y312 384 aaKnown RBP14.58□□□□□ -0.08
LINC00339-208ENST00000634934 SNX24Q9Y343 169 aa14.58□□□□□ -0.08
LINC00339-208ENST00000634934 PCDHGC4Q9Y5F7 938 aa14.58□□□□□ -0.08
LINC00339-208ENST00000634934 MYO15AQ9UKN7 3530 aa14.58□□□□□ -0.08
LINC00339-208ENST00000634934 ZNF318Q5VUA4 2279 aa14.58□□□□□ -0.08
LINC00339-208ENST00000634934 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.57□□□□□ -0.08
LINC00339-208ENST00000634934 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.57□□□□□ -0.08
LINC00339-208ENST00000634934 A0A1W2PQF6 199 aa14.57□□□□□ -0.08
LINC00339-208ENST00000634934 CHURC1-FNTBB4DL54 471 aa14.57□□□□□ -0.08
LINC00339-208ENST00000634934 RNASEH1O60930 286 aaKnown RBP14.57□□□□□ -0.08
LINC00339-208ENST00000634934 LEFTY1O75610 366 aa14.57□□□□□ -0.08
LINC00339-208ENST00000634934 IL1BP01584 269 aa14.57□□□□□ -0.08
LINC00339-208ENST00000634934 UGT2B4P06133 528 aa14.57□□□□□ -0.08
LINC00339-208ENST00000634934 CTSLP07711 333 aa14.57□□□□□ -0.08
LINC00339-208ENST00000634934 APRTP07741 180 aa14.57□□□□□ -0.08
LINC00339-208ENST00000634934 NUDT17P0C025 328 aa14.57□□□□□ -0.08
LINC00339-208ENST00000634934 MYZAPP0CAP1 466 aa14.57□□□□□ -0.08
LINC00339-208ENST00000634934 SERPINA4P29622 427 aa14.57□□□□□ -0.08
LINC00339-208ENST00000634934 AVPR2P30518 371 aa14.57□□□□□ -0.08
LINC00339-208ENST00000634934 LSP1P33241 339 aa14.57□□□□□ -0.08
LINC00339-208ENST00000634934 HSD17B3P37058 310 aa14.57□□□□□ -0.08
LINC00339-208ENST00000634934 CLCN5P51795 746 aa14.57□□□□□ -0.08
LINC00339-208ENST00000634934 SEMA5AQ13591 1074 aa14.57□□□□□ -0.08
LINC00339-208ENST00000634934 GAS6Q14393 721 aa14.57□□□□□ -0.08
LINC00339-208ENST00000634934 SPARCL1Q14515 664 aa14.57□□□□□ -0.08
LINC00339-208ENST00000634934 IHHQ14623 411 aa14.57□□□□□ -0.08
LINC00339-208ENST00000634934 POM121L1PQ3SYA9 428 aa14.57□□□□□ -0.08
LINC00339-208ENST00000634934 DSG4Q86SJ6 1040 aa14.57□□□□□ -0.08
LINC00339-208ENST00000634934 CACUL1Q86Y37 369 aa14.57□□□□□ -0.08
LINC00339-208ENST00000634934 MMAAQ8IVH4 418 aaKnown RBP14.57□□□□□ -0.08
LINC00339-208ENST00000634934 PDCD7Q8N8D1 485 aaKnown RBP14.57□□□□□ -0.08
LINC00339-208ENST00000634934 IFT81Q8WYA0 676 aa14.57□□□□□ -0.08
LINC00339-208ENST00000634934 CLDN23Q96B33 292 aa14.57□□□□□ -0.08
LINC00339-208ENST00000634934 CENPTQ96BT3 561 aa14.57□□□□□ -0.08
LINC00339-208ENST00000634934 TUBGCP5Q96RT8 1024 aa14.57□□□□□ -0.08
LINC00339-208ENST00000634934 CPEB1Q9BZB8 566 aaKnown RBP14.57□□□□□ -0.08
LINC00339-208ENST00000634934 VPS45Q9NRW7 570 aa14.57□□□□□ -0.08
LINC00339-208ENST00000634934 RAI2Q9Y5P3 530 aa14.57□□□□□ -0.08
LINC00339-208ENST00000634934 WASF2Q9Y6W5 498 aa14.57□□□□□ -0.08
LINC00339-208ENST00000634934 KPNA3O00505 521 aaPredicted RBP14.56□□□□□ -0.08
LINC00339-208ENST00000634934 ALOX15BO15296 676 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 FAM107AO95990 144 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 PRNPP04156 253 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 PSMD8P48556 350 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 WNT3AP56704 352 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 TRAF2Q12933 501 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 MPP3Q13368 585 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 GRM3Q14832 879 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 CRY1Q16526 586 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 IZUMO3Q5VZ72 239 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 KDELC1Q6UW63 502 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 TMEM92Q6UXU6 159 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 GDPD4Q6W3E5 623 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 TMC3Q7Z5M5 1100 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 OR2T3Q8NH03 318 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 PIP4K2CQ8TBX8 421 aa14.56□□□□□ -0.08
LINC00339-208ENST00000634934 IFT43Q96FT9 208 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms