RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 BIN3Q9NQY0 253 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 PCDHGA12O60330 932 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 CRTAMO95727 393 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 VARSP26640 1264 aaKnown RBP15.11■□□□□ 0.01
COL5A1-208ENST00000618395 HTR2BP41595 481 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 CTSKP43235 329 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 DCAF4Q8WV16 495 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 RHBDF1Q96CC6 855 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 ITCHQ96J02 903 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 RBM7Q9Y580 266 aaKnown RBP15.11■□□□□ 0.01
COL5A1-208ENST00000618395 GATBO75879 557 aaKnown RBP15.11■□□□□ 0.01
COL5A1-208ENST00000618395 HTR2AP28223 471 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 IL27RAQ6UWB1 636 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 ZSCAN1Q8NBB4 408 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 C3orf58Q8NDZ4 430 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 SPON1Q9HCB6 807 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 ZNF334Q9HCZ1 680 aaPredicted RBP15.11■□□□□ 0.01
COL5A1-208ENST00000618395 CIB4A0PJX0 185 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 ZNF705EA8MWA4 302 aaPredicted RBP15.11■□□□□ 0.01
COL5A1-208ENST00000618395 HIST1H2ABP04908 130 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 IGFBP5P24593 272 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 NR2C2P49116 596 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 SCNN1DP51172 638 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 BIKQ13323 160 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 FAM91A1Q658Y4 838 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 HIST3H2AQ7L7L0 130 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 CLNKQ7Z7G1 428 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 HIST1H2ACQ93077 130 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 REPS1Q96D71 796 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 OIP5O43482 229 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 SHBGP04278 402 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 VDRP11473 427 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 BTBD16Q32M84 506 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 OAFQ86UD1 273 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 BAP1Q92560 729 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 SGTAO43765 313 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 S100PP25815 95 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 DNASE1L3Q13609 305 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 HOPXQ9BPY8 73 aaPredicted RBP15.11■□□□□ 0.01
COL5A1-208ENST00000618395 PTPRHQ9HD43 1115 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 MAGEL2Q9UJ55 1249 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 PGAM1P18669 254 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 EIF4BP23588 611 aaKnown RBP15.11■□□□□ 0.01
COL5A1-208ENST00000618395 DSELQ8IZU8 1212 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 KAT8Q9H7Z6 458 aaKnown RBP15.11■□□□□ 0.01
COL5A1-208ENST00000618395 MAN1C1Q9NR34 630 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 TTC3P53804 2025 aa15.11■□□□□ 0.01
COL5A1-208ENST00000618395 MAGEB3O15480 346 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 CSTF1Q05048 431 aaKnown RBP15.1■□□□□ 0.01
COL5A1-208ENST00000618395 ANO7Q6IWH7 933 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 AHSA2Q719I0 299 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 SLC37A3Q8NCC5 494 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 CIDECQ96AQ7 238 aaPredicted RBP15.1■□□□□ 0.01
COL5A1-208ENST00000618395 TUBG2Q9NRH3 451 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 PCDHB16Q9NRJ7 776 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 GPATCH8Q9UKJ3 1502 aaKnown RBP15.1■□□□□ 0.01
COL5A1-208ENST00000618395 AATKQ6ZMQ8 1374 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 PRKAB2O43741 272 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 HOXD12P35452 270 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 HALP42357 657 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 QPCTQ16769 361 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 ZBED5Q49AG3 693 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 C1orf94Q6P1W5 598 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 QSOX2Q6ZRP7 698 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 USP7Q93009 1102 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 TEFMQ96QE5 360 aaKnown RBP15.1■□□□□ 0.01
COL5A1-208ENST00000618395 BRD7Q9NPI1 651 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 TPP1O14773 563 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 RSL1D1O76021 490 aaKnown RBP15.1■□□□□ 0.01
COL5A1-208ENST00000618395 SNAP29O95721 258 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 IDO1P14902 403 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 CRATP43155 626 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 CLK2P49760 499 aaKnown RBP15.1■□□□□ 0.01
COL5A1-208ENST00000618395 EFNA5P52803 228 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 CXorf57Q6NSI4 855 aaKnown RBP15.1■□□□□ 0.01
COL5A1-208ENST00000618395 GOLM1Q8NBJ4 401 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 RGCCQ9H4X1 137 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 GDAP2Q9NXN4 497 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 IFT80Q9P2H3 777 aaPredicted RBP15.1■□□□□ 0.01
COL5A1-208ENST00000618395 KBTBD13C9JR72 458 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 IL7P13232 177 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 PEX2P28328 305 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 CACNB3P54284 484 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 FGL2Q14314 439 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 MED8Q96G25 268 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 VCPIP1Q96JH7 1222 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 TNKS2Q9H2K2 1166 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 FANCFQ9NPI8 374 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 SCN8AQ9UQD0 1980 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 L7N2F9 121 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 CBLBQ13191 982 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 BRMS1LQ5PSV4 323 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 COQ8AQ8NI60 647 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 FAM136AQ96C01 138 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 ZNF649Q9BS31 505 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 NLNQ9BYT8 704 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 MAGEC1O60732 1142 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 ZNF81P51508 661 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 BBS1Q8NFJ9 593 aa15.1■□□□□ 0.01
COL5A1-208ENST00000618395 THAP6Q8TBB0 222 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms