RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 NSMCE3Q96MG7 304 aa14.9□□□□□ -0.02
CDH11-207ENST00000563255 TSPYL1Q9H0U9 437 aa14.9□□□□□ -0.02
CDH11-207ENST00000563255 NEUROG2Q9H2A3 272 aa14.9□□□□□ -0.02
CDH11-207ENST00000563255 HECAQ9UBI9 543 aaPredicted RBP14.9□□□□□ -0.02
CDH11-207ENST00000563255 MTRF1LQ9UGC7 380 aaKnown RBP14.9□□□□□ -0.02
CDH11-207ENST00000563255 EVLQ9UI08 416 aaPredicted RBP14.9□□□□□ -0.02
CDH11-207ENST00000563255 NFU1Q9UMS0 254 aa14.9□□□□□ -0.02
CDH11-207ENST00000563255 F5P12259 2224 aa14.9□□□□□ -0.02
CDH11-207ENST00000563255 LOC285095A0A1B0GVY8 99 aa14.89□□□□□ -0.03
CDH11-207ENST00000563255 ALOX15BO15296 676 aa14.89□□□□□ -0.03
CDH11-207ENST00000563255 SOCS5O75159 536 aa14.89□□□□□ -0.03
CDH11-207ENST00000563255 PMPCBO75439 489 aa14.89□□□□□ -0.03
CDH11-207ENST00000563255 GJB3O75712 270 aa14.89□□□□□ -0.03
CDH11-207ENST00000563255 CA4P22748 312 aa14.89□□□□□ -0.03
CDH11-207ENST00000563255 TIE1P35590 1138 aa14.89□□□□□ -0.03
CDH11-207ENST00000563255 CCNHP51946 323 aaPredicted RBP14.89□□□□□ -0.03
CDH11-207ENST00000563255 WNT3AP56704 352 aa14.89□□□□□ -0.03
CDH11-207ENST00000563255 CSTF1Q05048 431 aaKnown RBP14.89□□□□□ -0.03
CDH11-207ENST00000563255 HSF5Q4G112 596 aaPredicted RBP14.89□□□□□ -0.03
CDH11-207ENST00000563255 SYCP2LQ5T4T6 812 aa14.89□□□□□ -0.03
CDH11-207ENST00000563255 C9orf64Q5T6V5 341 aa14.89□□□□□ -0.03
CDH11-207ENST00000563255 CEP128Q6ZU80 1094 aa14.89□□□□□ -0.03
CDH11-207ENST00000563255 ZCCHC9Q8N567 271 aaKnown RBP14.89□□□□□ -0.03
CDH11-207ENST00000563255 IPMKQ8NFU5 416 aa14.89□□□□□ -0.03
CDH11-207ENST00000563255 VOPP1Q96AW1 172 aa14.89□□□□□ -0.03
CDH11-207ENST00000563255 FEM1CQ96JP0 617 aa14.89□□□□□ -0.03
CDH11-207ENST00000563255 NELL2Q99435 816 aa14.89□□□□□ -0.03
CDH11-207ENST00000563255 GABRG3Q99928 467 aa14.89□□□□□ -0.03
CDH11-207ENST00000563255 TBL1YQ9BQ87 522 aa14.89□□□□□ -0.03
CDH11-207ENST00000563255 HEPHQ9BQS7 1158 aa14.89□□□□□ -0.03
CDH11-207ENST00000563255 TDRD1Q9BXT4 1180 aaKnown RBP14.89□□□□□ -0.03
CDH11-207ENST00000563255 PHACTR1Q9C0D0 580 aa14.89□□□□□ -0.03
CDH11-207ENST00000563255 ATP13A3Q9H7F0 1226 aa14.89□□□□□ -0.03
CDH11-207ENST00000563255 ARNT2Q9HBZ2 717 aa14.89□□□□□ -0.03
CDH11-207ENST00000563255 XAB2Q9HCS7 855 aaKnown RBP14.89□□□□□ -0.03
CDH11-207ENST00000563255 CASS4Q9NQ75 786 aa14.89□□□□□ -0.03
CDH11-207ENST00000563255 MRPS17Q9Y2R5 130 aaKnown RBP14.89□□□□□ -0.03
CDH11-207ENST00000563255 STON1Q9Y6Q2 735 aa14.89□□□□□ -0.03
CDH11-207ENST00000563255 SCN8AQ9UQD0 1980 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 UQCRHLA0A096LP55 91 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 A0A1W2PQ67 120 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 ANTXRLA6NF34 631 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 EIF3HO15372 352 aaKnown RBP eCLIP14.88□□□□□ -0.03
CDH11-207ENST00000563255 HTRA2O43464 458 aaPredicted RBP14.88□□□□□ -0.03
CDH11-207ENST00000563255 FZD6O60353 706 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 UQCRHP07919 91 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 MYBL2P10244 700 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 PRKCHP24723 683 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 SERPINA4P29622 427 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 NTSR1P30989 418 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 CDK18Q07002 472 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 BCL2L1Q07817 233 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 CDH17Q12864 832 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 SPARCL1Q14515 664 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 PCSK7Q16549 785 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 SDE2Q6IQ49 451 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 ZNF534Q76KX8 674 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 CAND1Q86VP6 1230 aaKnown RBP14.88□□□□□ -0.03
CDH11-207ENST00000563255 CHPFQ8IZ52 775 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 ZNF687Q8N1G0 1237 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 SYNPOQ8N3V7 929 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 RYBPQ8N488 228 aaPredicted RBP14.88□□□□□ -0.03
CDH11-207ENST00000563255 IFT43Q96FT9 208 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 ZNF641Q96N77 438 aaPredicted RBP14.88□□□□□ -0.03
CDH11-207ENST00000563255 SERPINB12Q96P63 405 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 TRIB3Q96RU7 358 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 ACOX2Q99424 681 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 FMO2Q99518 471 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 FSD1LQ9BXM9 530 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 OSBPL1AQ9BXW6 950 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 OSBPL6Q9BZF3 934 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 LTB4R2Q9NPC1 389 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 IL36AQ9UHA7 158 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 PCDHGC4Q9Y5F7 938 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 RAI2Q9Y5P3 530 aa14.88□□□□□ -0.03
CDH11-207ENST00000563255 OTOGLQ3ZCN5 2332 aa14.87□□□□□ -0.03
CDH11-207ENST00000563255 LRRK1Q38SD2 2015 aa14.87□□□□□ -0.03
CDH11-207ENST00000563255 GOLGA8MH3BSY2 632 aa14.87□□□□□ -0.03
CDH11-207ENST00000563255 TRAFD1O14545 582 aaPredicted RBP14.87□□□□□ -0.03
CDH11-207ENST00000563255 BNIP3LO60238 219 aa14.87□□□□□ -0.03
CDH11-207ENST00000563255 SIN3BO75182 1162 aa14.87□□□□□ -0.03
CDH11-207ENST00000563255 AGTP01019 485 aa14.87□□□□□ -0.03
CDH11-207ENST00000563255 EPHX1P07099 455 aa14.87□□□□□ -0.03
CDH11-207ENST00000563255 HLA-EP13747 358 aa14.87□□□□□ -0.03
CDH11-207ENST00000563255 HLA-DPA1P20036 260 aa14.87□□□□□ -0.03
CDH11-207ENST00000563255 GRIA1P42261 906 aa14.87□□□□□ -0.03
CDH11-207ENST00000563255 MAGEA3P43357 314 aa14.87□□□□□ -0.03
CDH11-207ENST00000563255 TNNT3P45378 269 aaPredicted RBP14.87□□□□□ -0.03
CDH11-207ENST00000563255 SEC13P55735 322 aa14.87□□□□□ -0.03
CDH11-207ENST00000563255 ARL4CP56559 192 aa14.87□□□□□ -0.03
CDH11-207ENST00000563255 TRAF2Q12933 501 aa14.87□□□□□ -0.03
CDH11-207ENST00000563255 CAMK2GQ13555 558 aaPredicted RBP14.87□□□□□ -0.03
CDH11-207ENST00000563255 BRD3Q15059 726 aa14.87□□□□□ -0.03
CDH11-207ENST00000563255 SLC1A5Q15758 541 aa14.87□□□□□ -0.03
CDH11-207ENST00000563255 ZNF528Q3MIS6 628 aa14.87□□□□□ -0.03
CDH11-207ENST00000563255 CAMK1DQ8IU85 385 aa14.87□□□□□ -0.03
CDH11-207ENST00000563255 PDIK1LQ8N165 341 aa14.87□□□□□ -0.03
CDH11-207ENST00000563255 ZNF366Q8N895 744 aa14.87□□□□□ -0.03
CDH11-207ENST00000563255 IL17RCQ8NAC3 791 aa14.87□□□□□ -0.03
CDH11-207ENST00000563255 SUMF1Q8NBK3 374 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms