RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 ZWILCHQ9H900 591 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 RGS18Q9NS28 235 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 ZDHHC18Q9NUE0 388 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 FAM49BQ9NUQ9 324 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 SAGE1Q9NXZ1 904 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 PSD3Q9NYI0 1048 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.61□□□□□ -1.67
SRP54-212ENST00000556992 VPS18Q9P253 973 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 NDOR1Q9UHB4 597 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 PCSK1NQ9UHG2 260 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 ADAM21Q9UKJ8 722 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 CDH9Q9ULB4 789 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 USP18Q9UMW8 372 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 DICER1Q9UPY3 1922 aaKnown RBP4.61□□□□□ -1.67
SRP54-212ENST00000556992 THSD7BQ9C0I4 1608 aa4.61□□□□□ -1.67
SRP54-212ENST00000556992 ATAD5Q96QE3 1844 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 SBF1O95248 1867 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 SMCHD1A6NHR9 2005 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 PMS2P1A4D2B8 440 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 GOLGA6CA6NDK9 693 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 C3orf70A6NLC5 250 aaPredicted RBP4.6□□□□□ -1.67
SRP54-212ENST00000556992 HMGB1P1B2RPK0 211 aaPredicted RBP4.6□□□□□ -1.67
SRP54-212ENST00000556992 KBTBD13C9JR72 458 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 H3BQF6 201 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 PAPSS1O43252 624 aaPredicted RBP4.6□□□□□ -1.67
SRP54-212ENST00000556992 CST8O60676 142 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 ZNF189O75820 626 aaPredicted RBP4.6□□□□□ -1.67
SRP54-212ENST00000556992 B3GAT3O94766 335 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 ENDOD1O94919 500 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 PEX11BO96011 259 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 F9P00740 461 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 KRT14P02533 472 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 FAM200BP0CF97 657 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 GOLGA6DP0CG33 693 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 GHRP10912 638 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 ODC1P11926 461 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 CKBP12277 381 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 KRT10P13645 584 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 IVDP26440 423 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 ADORA2BP29275 332 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 GJC1P36383 396 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 MLH1P40692 756 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 MATKP42679 507 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 RPL21P46778 160 aaKnown RBP4.6□□□□□ -1.67
SRP54-212ENST00000556992 NR2C2P49116 596 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 CLCNKBP51801 687 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 RABGGTBP53611 331 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 VCPP55072 806 aaKnown RBP4.6□□□□□ -1.67
SRP54-212ENST00000556992 SLC25A11Q02978 314 aaKnown RBP4.6□□□□□ -1.67
SRP54-212ENST00000556992 KRT17Q04695 432 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 GRIK3Q13003 919 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 KRT81Q14533 505 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 CCDC142Q17RM4 750 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 SLC25A52Q3SY17 297 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 KCNT1Q5JUK3 1230 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 CEP85LQ5SZL2 805 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 ERMARDQ5T6L9 678 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 ZNF618Q5T7W0 954 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 KAZNQ674X7 775 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 DENND2CQ68D51 928 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 SCYL2Q6P3W7 929 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 KLHDC10Q6PID8 442 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 OLFML1Q6UWY5 402 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 ZDHHC24Q6UX98 284 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 C4orf22Q6V702 233 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 FAM183BPQ6ZVS7 135 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 BZW1Q7L1Q6 419 aaKnown RBP4.6□□□□□ -1.67
SRP54-212ENST00000556992 ECHDC2Q86YB7 292 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 RFX6Q8HWS3 928 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 SIX6OS1Q8N1H7 587 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 ZNF276Q8N554 614 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 ARFGAP2Q8N6H7 521 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 ALLCQ8N6M5 410 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 EMC1Q8N766 993 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 RNF169Q8NCN4 708 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 FAM76AQ8TAV0 307 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 SLC35B2Q8TB61 432 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 FBXO25Q8TCJ0 367 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 URGCPQ8TCY9 931 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 NTN5Q8WTR8 489 aaPredicted RBP4.6□□□□□ -1.67
SRP54-212ENST00000556992 UBLCP1Q8WVY7 318 aaPredicted RBP4.6□□□□□ -1.67
SRP54-212ENST00000556992 ATXN2LQ8WWM7 1075 aaKnown RBP4.6□□□□□ -1.67
SRP54-212ENST00000556992 RSAD2Q8WXG1 361 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 ATG4AQ8WYN0 398 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 RSPH1Q8WYR4 309 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 P3H4Q92791 437 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 GCDHQ92947 438 aaPredicted RBP4.6□□□□□ -1.67
SRP54-212ENST00000556992 NAF1Q96HR8 494 aaKnown RBP4.6□□□□□ -1.67
SRP54-212ENST00000556992 ATP6V1G3Q96LB4 118 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 CCDC114Q96M63 670 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 ZIM3Q96PE6 472 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 TRIM51Q9BSJ1 452 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 MED10Q9BTT4 135 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 DDX23Q9BUQ8 820 aaKnown RBP4.6□□□□□ -1.67
SRP54-212ENST00000556992 TMEM109Q9BVC6 243 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 TRIM62Q9BVG3 475 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 CALN1Q9BXU9 219 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 B3GNT5Q9BYG0 378 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 TRIM55Q9BYV6 548 aa4.6□□□□□ -1.67
SRP54-212ENST00000556992 TXLNGYQ9BZA5 131 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms