RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 C9P02748 559 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 VTNP04004 478 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 RPN1P04843 607 aaKnown RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 FAM200BP0CF97 657 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 GJA1P17302 382 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 MAKP20794 623 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 NDUFS1P28331 727 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 HOXD3P31249 432 aaPredicted RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 ADRA1BP35368 520 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 MLH1P40692 756 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 ASCL1P50553 236 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 ADARP55265 1226 aaKnown RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 PROK1P58294 105 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 GUCY1B3Q02153 619 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 C17orf67Q0P5P2 114 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 GALNT3Q14435 633 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 ZNF169Q14929 603 aaPredicted RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 PTPAQ15257 358 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 RABEP1Q15276 862 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 RASA2Q15283 850 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 TBC1D9BQ66K14 1250 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 LCN10Q6JVE6 187 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 LRRC8EQ6NSJ5 796 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 TRIM72Q6ZMU5 477 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 RNF207Q6ZRF8 634 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 GSTA5Q7RTV2 222 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 PRSS45Q7RTY3 260 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 MRGPREQ86SM8 312 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 SCML4Q8N228 414 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 GCSAMQ8N6F7 178 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 TOR1AIP2Q8NFQ8 470 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 FAM110DQ8TAY7 271 aaPredicted RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 SLC25A43Q8WUT9 341 aaPredicted RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 CUL5Q93034 780 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 LINC00615Q96LM1 132 aaPredicted RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 TSPAN18Q96SJ8 248 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 MMS19Q96T76 1030 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 DESI2Q9BSY9 194 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 NDST4Q9H3R1 872 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 ZNF304Q9HCX3 659 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 FBXO28Q9NVF7 368 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 HMG20BQ9P0W2 317 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 ANAPC2Q9UJX6 822 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 INTS6Q9UL03 887 aaKnown RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 EPN1Q9Y6I3 576 aaPredicted RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 SIGLEC1Q9BZZ2 1709 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 ADGRF5Q8IZF2 1346 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 TRGV11A0A075B6L2 103 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 A0A1W2PN81 502 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 ARHGAP10A1A4S6 786 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 LIPT2A6NK58 231 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 MDM4O15151 490 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 ASAP2O43150 1006 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 SYNCRIPO60506 623 aaKnown RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 SOX30O94993 753 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 NPSP0C0P6 89 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 ARL3P36405 182 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 CHRNA7P36544 502 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 RBM5P52756 815 aaKnown RBP eCLIP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 RCAN1P53805 252 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 DRG2P55039 364 aaKnown RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 CLDN2P57739 230 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 ZP1P60852 638 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 TGFB2P61812 414 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 IFI35P80217 286 aaPredicted RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 COL10A1Q03692 680 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 TMEM115Q12893 351 aaPredicted RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 PKP1Q13835 747 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 SCARB2Q14108 478 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 KRT31Q15323 416 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 RPS6KA2Q15349 733 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 TYSND1Q2T9J0 566 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 C2orf76Q3KRA6 126 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 CXorf66Q5JRM2 361 aaPredicted RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 GKAP1Q5VSY0 366 aaPredicted RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 TTI2Q6NXR4 508 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 CDC73Q6P1J9 531 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 C17orf99Q6UX52 265 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 SERPINA13PQ6UXR4 307 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 Q6ZWC4 215 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 PLPPR4Q7Z2D5 763 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 TMEM217Q8N7C4 229 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 ANKRD44Q8N8A2 993 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 SETD9Q8NE22 299 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 BEST4Q8NFU0 473 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 AFAP1L1Q8TED9 768 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 RNF31Q96EP0 1072 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 VCPIP1Q96JH7 1222 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 LURAP1Q96LR2 239 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 Q96MF0 132 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 TM2D2Q9BX73 214 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 COG4Q9H9E3 785 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 DDX4Q9NQI0 724 aaKnown RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 DUSP22Q9NRW4 184 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 OLA1Q9NTK5 396 aaKnown RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 SUCLA2Q9P2R7 463 aaPredicted RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 SEL1LQ9UBV2 794 aa1.1□□□□□ -2.23
HIF1A-204ENST00000539097 CFDP1Q9UEE9 299 aaPredicted RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 PLEKHB1Q9UF11 243 aaPredicted RBP1.1□□□□□ -2.23
HIF1A-204ENST00000539097 CARD8Q9Y2G2 431 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms