RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 MFHAS1Q9Y4C4 1052 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 AK5Q9Y6K8 562 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 SMG1Q96Q15 3661 aaKnown RBP9.7□□□□□ -0.86
MSH5-218ENST00000494646 FAM208BQ5VWN6 2430 aa9.7□□□□□ -0.86
MSH5-218ENST00000494646 NEMP2A6NFY4 417 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 A8MX80 341 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 GOLGA6L19H0YKK7 550 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 K7ESM1 405 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 ALPPL2P10696 532 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 CDK4P11802 303 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 JUNDP17535 347 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 IL1R2P27930 398 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 HNF1BP35680 557 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 EIF4A3P38919 411 aaKnown RBP9.69□□□□□ -0.86
MSH5-218ENST00000494646 SCNN1BP51168 640 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 THOP1P52888 689 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 PFN3P60673 137 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 TCEA2Q15560 299 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 UGP2Q16851 508 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 KIF26BQ2KJY2 2108 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 SMTNL2Q2TAL5 461 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 DEFB133Q30KQ1 61 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 TMEM52BQ4KMG9 183 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 CFAP58Q5T655 872 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 FAXCQ5TGI0 409 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 HGSNATQ68CP4 663 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 RFX8Q6ZV50 586 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 CYP4V2Q6ZWL3 525 aaPredicted RBP9.69□□□□□ -0.86
MSH5-218ENST00000494646 RD3Q7Z3Z2 195 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 ZSWIM9Q86XI8 627 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 RBFAQ8N0V3 343 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 NPWQ8N729 165 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 PAF1Q8N7H5 531 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 TP53I13Q8NBR0 393 aaPredicted RBP9.69□□□□□ -0.86
MSH5-218ENST00000494646 ASB12Q8WXK4 309 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 IFT43Q96FT9 208 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 NSMCE3Q96MG7 304 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 DCBLD2Q96PD2 775 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 PCDH12Q9NPG4 1184 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 GPR27Q9NS67 375 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 ETNK2Q9NVF9 386 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 DONSONQ9NYP3 566 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 IFNKQ9P0W0 207 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 DKK3Q9UBP4 350 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 PNMA8BQ9ULN7 279 aaPredicted RBP9.69□□□□□ -0.86
MSH5-218ENST00000494646 SCINQ9Y6U3 715 aa9.69□□□□□ -0.86
MSH5-218ENST00000494646 CPED1A4D0V7 1026 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 H3BM21 787 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 MUSKO15146 869 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 AQP9O43315 295 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 LZTS3O60299 673 aaPredicted RBP9.68□□□□□ -0.86
MSH5-218ENST00000494646 GCATO75600 419 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 MT-CO3P00414 261 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 SERPING1P05155 500 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 HTR7P34969 479 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 IGFALSP35858 605 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 PBX1P40424 430 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 SSR1P43307 286 aaKnown RBP9.68□□□□□ -0.86
MSH5-218ENST00000494646 LIG3P49916 1009 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 ADKP55263 362 aaKnown RBP9.68□□□□□ -0.86
MSH5-218ENST00000494646 E2F1Q01094 437 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 IL10RBQ08334 325 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 SLC10A7Q0GE19 358 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 ELP6Q0PNE2 266 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 ILKQ13418 452 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 PTK2BQ14289 1009 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 COL28A1Q2UY09 1125 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 BOLA3Q53S33 107 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 PRRT3Q5FWE3 981 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 FIGNQ5HY92 759 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 CCDC122Q5T0U0 273 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 AFMIDQ63HM1 303 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 TXNRD3NBQ6F5E7 133 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 CRTC1Q6UUV9 634 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 NYAP1Q6ZVC0 841 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 ZSCAN30Q86W11 494 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 PARGQ86W56 976 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 DENND6BQ8NEG7 585 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 ZNF548Q8NEK5 533 aaPredicted RBP9.68□□□□□ -0.86
MSH5-218ENST00000494646 FNIP1Q8TF40 1166 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 TSACCQ96A04 125 aaPredicted RBP9.68□□□□□ -0.86
MSH5-218ENST00000494646 CINPQ9BW66 212 aaPredicted RBP9.68□□□□□ -0.86
MSH5-218ENST00000494646 THAP2Q9H0W7 228 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 ABCG4Q9H172 646 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 NLGN3Q9NZ94 848 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 CLCA2Q9UQC9 943 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 GPSM3Q9Y4H4 160 aa9.68□□□□□ -0.86
MSH5-218ENST00000494646 UNC13CQ8NB66 2214 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 A0A087X0T9 212 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 LY6G6EA0A0G2JKS1 128 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 EIF3CLB5ME19 914 aaKnown RBP9.67□□□□□ -0.86
MSH5-218ENST00000494646 OPA1O60313 960 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 FAM228BP0C875 321 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 MYBL1P10243 752 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 RARAP10276 462 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 CKMT1AP12532 417 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 C6P13671 934 aa9.67□□□□□ -0.86
MSH5-218ENST00000494646 HOXB3P14651 431 aaPredicted RBP9.67□□□□□ -0.86
MSH5-218ENST00000494646 NME1P15531 152 aaKnown RBP9.67□□□□□ -0.86
MSH5-218ENST00000494646 PCK1P35558 622 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms