RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 SUN1O94901 812 aa12.54□□□□□ -0.4
SNX17-208ENST00000493711 HEXIM1O94992 359 aaKnown RBP12.54□□□□□ -0.4
SNX17-208ENST00000493711 NDST3O95803 873 aa12.54□□□□□ -0.4
SNX17-208ENST00000493711 DNTTP04053 509 aa12.54□□□□□ -0.4
SNX17-208ENST00000493711 MMP2P08253 660 aa12.54□□□□□ -0.4
SNX17-208ENST00000493711 HLA-DPA1P20036 260 aa12.54□□□□□ -0.4
SNX17-208ENST00000493711 C5AR1P21730 350 aa12.54□□□□□ -0.4
SNX17-208ENST00000493711 ITGB7P26010 798 aa12.54□□□□□ -0.4
SNX17-208ENST00000493711 VPS41P49754 854 aa12.54□□□□□ -0.4
SNX17-208ENST00000493711 CCR3P51677 355 aa12.54□□□□□ -0.4
SNX17-208ENST00000493711 NRLP54845 237 aa12.54□□□□□ -0.4
SNX17-208ENST00000493711 WNT3AP56704 352 aa12.54□□□□□ -0.4
SNX17-208ENST00000493711 MORF4L2Q15014 288 aa12.54□□□□□ -0.4
SNX17-208ENST00000493711 CST6Q15828 149 aa12.54□□□□□ -0.4
SNX17-208ENST00000493711 TTC31Q49AM3 519 aaPredicted RBP12.54□□□□□ -0.4
SNX17-208ENST00000493711 DUPD1Q68J44 220 aa12.54□□□□□ -0.4
SNX17-208ENST00000493711 KDELC1Q6UW63 502 aa12.54□□□□□ -0.4
SNX17-208ENST00000493711 Q6ZS52 159 aa12.54□□□□□ -0.4
SNX17-208ENST00000493711 IFT20Q8IY31 132 aa12.54□□□□□ -0.4
SNX17-208ENST00000493711 ZNF366Q8N895 744 aa12.54□□□□□ -0.4
SNX17-208ENST00000493711 CHST14Q8NCH0 376 aa12.54□□□□□ -0.4
SNX17-208ENST00000493711 MCUQ8NE86 351 aa12.54□□□□□ -0.4
SNX17-208ENST00000493711 TSTD1Q8NFU3 115 aa12.54□□□□□ -0.4
SNX17-208ENST00000493711 SPATA22Q8NHS9 363 aa12.54□□□□□ -0.4
SNX17-208ENST00000493711 PIP4K2CQ8TBX8 421 aa12.54□□□□□ -0.4
SNX17-208ENST00000493711 GRIN3AQ8TCU5 1115 aa12.54□□□□□ -0.4
SNX17-208ENST00000493711 PRCCQ92733 491 aaPredicted RBP12.54□□□□□ -0.4
SNX17-208ENST00000493711 RAB7BQ96AH8 199 aa12.54□□□□□ -0.4
SNX17-208ENST00000493711 OXNAD1Q96HP4 312 aaPredicted RBP12.54□□□□□ -0.4
SNX17-208ENST00000493711 TDRD1Q9BXT4 1180 aaKnown RBP12.54□□□□□ -0.4
SNX17-208ENST00000493711 HDAC8Q9BY41 377 aa12.54□□□□□ -0.4
SNX17-208ENST00000493711 SHOC2Q9UQ13 582 aa12.54□□□□□ -0.4
SNX17-208ENST00000493711 TICRRQ7Z2Z1 1910 aa12.54□□□□□ -0.4
SNX17-208ENST00000493711 KPNA3O00505 521 aaPredicted RBP12.53□□□□□ -0.4
SNX17-208ENST00000493711 TRAFD1O14545 582 aaPredicted RBP12.53□□□□□ -0.4
SNX17-208ENST00000493711 MAP3K7O43318 606 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 PMPCBO75439 489 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 PGLSO95336 258 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 APBB3O95704 486 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 IL1BP01584 269 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 FGF1P05230 155 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 UGT2B4P06133 528 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 TUBBP07437 444 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 APRTP07741 180 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 ACADMP11310 421 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 MLNP12872 115 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 XPAP23025 273 aaPredicted RBP12.53□□□□□ -0.4
SNX17-208ENST00000493711 MCM3P25205 808 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 CXCL12P48061 93 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 EPHB1P54762 984 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 SATB1Q01826 763 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 CUL1Q13616 776 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 LAMB3Q13751 1172 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 TEX35Q5T0J7 233 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 IZUMO3Q5VZ72 239 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 KCTD11Q693B1 232 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 CWF19L1Q69YN2 538 aaKnown RBP12.53□□□□□ -0.4
SNX17-208ENST00000493711 CEP128Q6ZU80 1094 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 USP30Q70CQ3 517 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 KBTBD6Q86V97 674 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 TMPRSS6Q8IU80 811 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 CAMK1DQ8IU85 385 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.53□□□□□ -0.4
SNX17-208ENST00000493711 IPMKQ8NFU5 416 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 OR6K2Q8NGY2 324 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 SEC14L1Q92503 715 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 UBXN4Q92575 508 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 PBXIP1Q96AQ6 731 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 ECHDC3Q96DC8 303 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 SIPA1Q96FS4 1042 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 TBL1YQ9BQ87 522 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 TRIM51Q9BSJ1 452 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 MLPHQ9BV36 600 aaPredicted RBP12.53□□□□□ -0.4
SNX17-208ENST00000493711 FOXP3Q9BZS1 431 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 TSPYL1Q9H0U9 437 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 MTG2Q9H4K7 406 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 ARNT2Q9HBZ2 717 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 XAB2Q9HCS7 855 aaKnown RBP12.53□□□□□ -0.4
SNX17-208ENST00000493711 CD248Q9HCU0 757 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 RRAGDQ9NQL2 400 aaPredicted RBP12.53□□□□□ -0.4
SNX17-208ENST00000493711 ANAPC5Q9UJX4 755 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 PHTF1Q9UMS5 762 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 NCKAP1Q9Y2A7 1128 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 PCDHGC4Q9Y5F7 938 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 KIAA1549LQ6ZVL6 1849 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 CFAP54Q96N23 3096 aa12.53□□□□□ -0.4
SNX17-208ENST00000493711 LOC285095A0A1B0GVY8 99 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 TCRBV21S2A2A0A5A6 115 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 C16orf96A6NNT2 1141 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 SLC7A4O43246 635 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 FZD6O60353 706 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 ZNF217O75362 1048 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 SEC31AO94979 1220 aaKnown RBP12.52□□□□□ -0.41
SNX17-208ENST00000493711 MT-CYBP00156 380 aaPredicted RBP12.52□□□□□ -0.41
SNX17-208ENST00000493711 CPP00450 1065 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 DCNP07585 359 aaKnown RBP12.52□□□□□ -0.41
SNX17-208ENST00000493711 IVDP26440 423 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 HOXA6P31267 233 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 SLC8A1P32418 973 aa12.52□□□□□ -0.41
SNX17-208ENST00000493711 ADRA1AP35348 466 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms