RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 CES1P23141 567 aa17.98■□□□□ 0.47
CPNE1-224ENST00000483359 ACTN2P35609 894 aa17.98■□□□□ 0.47
CPNE1-224ENST00000483359 ABL2P42684 1182 aa17.98■□□□□ 0.47
CPNE1-224ENST00000483359 VPS41P49754 854 aa17.98■□□□□ 0.47
CPNE1-224ENST00000483359 TERF1P54274 439 aa17.98■□□□□ 0.47
CPNE1-224ENST00000483359 ADPRHP54922 357 aa17.98■□□□□ 0.47
CPNE1-224ENST00000483359 ARMC12Q5T9G4 340 aa17.98■□□□□ 0.47
CPNE1-224ENST00000483359 IPMKQ8NFU5 416 aa17.98■□□□□ 0.47
CPNE1-224ENST00000483359 NELL1Q92832 810 aa17.98■□□□□ 0.47
CPNE1-224ENST00000483359 ECHDC3Q96DC8 303 aa17.98■□□□□ 0.47
CPNE1-224ENST00000483359 MBD1Q9UIS9 605 aaPredicted RBP17.98■□□□□ 0.47
CPNE1-224ENST00000483359 ESPNB1AK53 854 aa17.97■□□□□ 0.47
CPNE1-224ENST00000483359 HRO43593 1189 aa17.97■□□□□ 0.47
CPNE1-224ENST00000483359 PGLSO95336 258 aa17.97■□□□□ 0.47
CPNE1-224ENST00000483359 CPP00450 1065 aa17.97■□□□□ 0.47
CPNE1-224ENST00000483359 C7P10643 843 aa17.97■□□□□ 0.47
CPNE1-224ENST00000483359 GALNT3Q14435 633 aa17.97■□□□□ 0.47
CPNE1-224ENST00000483359 BRAT1Q6PJG6 821 aa17.97■□□□□ 0.47
CPNE1-224ENST00000483359 ZBTB44Q8NCP5 570 aa17.97■□□□□ 0.47
CPNE1-224ENST00000483359 LPCAT1Q8NF37 534 aa17.97■□□□□ 0.47
CPNE1-224ENST00000483359 ATL2Q8NHH9 583 aa17.97■□□□□ 0.47
CPNE1-224ENST00000483359 GPR174Q9BXC1 333 aa17.97■□□□□ 0.47
CPNE1-224ENST00000483359 HDAC8Q9BY41 377 aa17.97■□□□□ 0.47
CPNE1-224ENST00000483359 PCDH9Q9HC56 1237 aa17.97■□□□□ 0.47
CPNE1-224ENST00000483359 WSB2Q9NYS7 404 aaPredicted RBP17.97■□□□□ 0.47
CPNE1-224ENST00000483359 FAM153AQ9UHL3 310 aa17.97■□□□□ 0.47
CPNE1-224ENST00000483359 CDC23Q9UJX2 597 aa17.97■□□□□ 0.47
CPNE1-224ENST00000483359 FZD4Q9ULV1 537 aa17.97■□□□□ 0.47
CPNE1-224ENST00000483359 MAP3K13O43283 966 aa17.97■□□□□ 0.47
CPNE1-224ENST00000483359 HTRA2O43464 458 aaPredicted RBP17.97■□□□□ 0.47
CPNE1-224ENST00000483359 IGLV3-19P01714 112 aa17.97■□□□□ 0.47
CPNE1-224ENST00000483359 TAS2R38P59533 333 aa17.97■□□□□ 0.47
CPNE1-224ENST00000483359 RPL6Q02878 288 aaKnown RBP17.97■□□□□ 0.47
CPNE1-224ENST00000483359 C2orf54Q08AI8 447 aa17.97■□□□□ 0.47
CPNE1-224ENST00000483359 SFSWAPQ12872 951 aaKnown RBP17.97■□□□□ 0.47
CPNE1-224ENST00000483359 OLIG2Q13516 323 aa17.97■□□□□ 0.47
CPNE1-224ENST00000483359 PTPRRQ15256 657 aa17.97■□□□□ 0.47
CPNE1-224ENST00000483359 UGP2Q16851 508 aa17.97■□□□□ 0.47
CPNE1-224ENST00000483359 GAB3Q8WWW8 586 aa17.97■□□□□ 0.47
CPNE1-224ENST00000483359 SMIM14Q96QK8 99 aa17.97■□□□□ 0.47
CPNE1-224ENST00000483359 MLPHQ9BV36 600 aaPredicted RBP17.97■□□□□ 0.47
CPNE1-224ENST00000483359 DKK3Q9UBP4 350 aa17.97■□□□□ 0.47
CPNE1-224ENST00000483359 PCDHGA2Q9Y5H1 932 aa17.97■□□□□ 0.47
CPNE1-224ENST00000483359 TSPAN11A1L157 253 aa17.96■□□□□ 0.47
CPNE1-224ENST00000483359 A8MX80 341 aa17.96■□□□□ 0.47
CPNE1-224ENST00000483359 UPK3BL1B0FP48 263 aa17.96■□□□□ 0.47
CPNE1-224ENST00000483359 UPK3BL2E5RIL1 263 aa17.96■□□□□ 0.47
CPNE1-224ENST00000483359 SEMA4FO95754 770 aa17.96■□□□□ 0.47
CPNE1-224ENST00000483359 TIMP2P16035 220 aa17.96■□□□□ 0.47
CPNE1-224ENST00000483359 CTPS1P17812 591 aa17.96■□□□□ 0.47
CPNE1-224ENST00000483359 CA4P22748 312 aa17.96■□□□□ 0.47
CPNE1-224ENST00000483359 FNTAP49354 379 aa17.96■□□□□ 0.47
CPNE1-224ENST00000483359 EPHB1P54762 984 aa17.96■□□□□ 0.47
CPNE1-224ENST00000483359 PRPSAP1Q14558 356 aa17.96■□□□□ 0.47
CPNE1-224ENST00000483359 CEP68Q76N32 757 aa17.96■□□□□ 0.47
CPNE1-224ENST00000483359 ARMCX6Q7L4S7 300 aa17.96■□□□□ 0.47
CPNE1-224ENST00000483359 IFT43Q96FT9 208 aa17.96■□□□□ 0.47
CPNE1-224ENST00000483359 PRRX2Q99811 253 aa17.96■□□□□ 0.47
CPNE1-224ENST00000483359 FSD1LQ9BXM9 530 aa17.96■□□□□ 0.47
CPNE1-224ENST00000483359 FAM86C1Q9NVL1 165 aa17.96■□□□□ 0.47
CPNE1-224ENST00000483359 TBC1D3DA0A087WVF3 549 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 TBC1D3IA0A087WXS9 549 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 TBC1D3EA0A087X179 549 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 TBC1D3KA0A087X1G2 549 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 TBC1D3FA6NER0 549 aaPredicted RBP17.95■□□□□ 0.46
CPNE1-224ENST00000483359 TBC1D3LB9A6J9 549 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 NEMP1O14524 444 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 PLRG1O43660 514 aaKnown RBP17.95■□□□□ 0.46
CPNE1-224ENST00000483359 FZD6O60353 706 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 NDUFS2O75306 463 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 ALPIP09923 528 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 TBC1D3HP0C7X1 549 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 OXTRP30559 389 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 RPL22P35268 128 aaKnown RBP17.95■□□□□ 0.46
CPNE1-224ENST00000483359 WNT3AP56704 352 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 FAM193AP78312 1265 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 LPAL2Q16609 132 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 TBC1D3GQ6DHY5 549 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 TBC1D3CQ6IPX1 549 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 PRR23BQ6ZRT6 265 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 TMEFF1Q8IYR6 380 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 TBC1D3Q8IZP1 549 aaPredicted RBP17.95■□□□□ 0.46
CPNE1-224ENST00000483359 SPATA4Q8NEY3 305 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 TADA1Q96BN2 335 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 RMDN1Q96DB5 314 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 C6orf106Q9H6K1 298 aaPredicted RBP17.95■□□□□ 0.46
CPNE1-224ENST00000483359 SGK2Q9HBY8 427 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 PCDH12Q9NPG4 1184 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 PAK5Q9P286 719 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 MRFAP1Q9Y605 127 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 PLXND1Q9Y4D7 1925 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 SPINT1O43278 529 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 PCDH8O95206 1070 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 ECEL1O95672 775 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 PRLP01236 227 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 MRPS25P82663 173 aaKnown RBP17.95■□□□□ 0.46
CPNE1-224ENST00000483359 LMNB2Q03252 620 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 CDK18Q07002 472 aa17.95■□□□□ 0.46
CPNE1-224ENST00000483359 MPP3Q13368 585 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms