RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 SIGLEC6O43699 453 aa12.2□□□□□ -0.46
HDLBP-239ENST00000483086 NEBLO76041 1014 aa12.2□□□□□ -0.46
HDLBP-239ENST00000483086 ARRB1P49407 418 aaPredicted RBP12.2□□□□□ -0.46
HDLBP-239ENST00000483086 TPM4P67936 248 aa12.2□□□□□ -0.46
HDLBP-239ENST00000483086 RALGDSQ12967 914 aa12.2□□□□□ -0.46
HDLBP-239ENST00000483086 NFKBIBQ15653 356 aa12.2□□□□□ -0.46
HDLBP-239ENST00000483086 SMAD1Q15797 465 aaKnown RBP12.2□□□□□ -0.46
HDLBP-239ENST00000483086 SLC45A4Q5BKX6 768 aa12.2□□□□□ -0.46
HDLBP-239ENST00000483086 TTC7BQ86TV6 843 aa12.2□□□□□ -0.46
HDLBP-239ENST00000483086 VSTM4Q8IW00 320 aa12.2□□□□□ -0.46
HDLBP-239ENST00000483086 PELI3Q8N2H9 469 aa12.2□□□□□ -0.46
HDLBP-239ENST00000483086 FAM71BQ8TC56 605 aa12.2□□□□□ -0.46
HDLBP-239ENST00000483086 RAB7BQ96AH8 199 aa12.2□□□□□ -0.46
HDLBP-239ENST00000483086 SKA1Q96BD8 255 aa12.2□□□□□ -0.46
HDLBP-239ENST00000483086 ECHDC3Q96DC8 303 aa12.2□□□□□ -0.46
HDLBP-239ENST00000483086 EIF3CQ99613 913 aaKnown RBP12.2□□□□□ -0.46
HDLBP-239ENST00000483086 SUV39H2Q9H5I1 410 aa12.2□□□□□ -0.46
HDLBP-239ENST00000483086 PCDH12Q9NPG4 1184 aa12.2□□□□□ -0.46
HDLBP-239ENST00000483086 IPO11Q9UI26 975 aaKnown RBP12.2□□□□□ -0.46
HDLBP-239ENST00000483086 BZW2Q9Y6E2 419 aaKnown RBP12.2□□□□□ -0.46
HDLBP-239ENST00000483086 ADAMTS20P59510 1910 aa12.19□□□□□ -0.46
HDLBP-239ENST00000483086 SPTY2D1-AS1A0A0U1RR47 76 aa12.19□□□□□ -0.46
HDLBP-239ENST00000483086 SRRM3A6NNA2 597 aaPredicted RBP12.19□□□□□ -0.46
HDLBP-239ENST00000483086 A6NNZ2 444 aa12.19□□□□□ -0.46
HDLBP-239ENST00000483086 RIOK3O14730 519 aaKnown RBP12.19□□□□□ -0.46
HDLBP-239ENST00000483086 FFAR2O15552 330 aa12.19□□□□□ -0.46
HDLBP-239ENST00000483086 DAPK3O43293 454 aa12.19□□□□□ -0.46
HDLBP-239ENST00000483086 MAFKO60675 156 aa12.19□□□□□ -0.46
HDLBP-239ENST00000483086 PALMO75781 387 aa12.19□□□□□ -0.46
HDLBP-239ENST00000483086 MAP3K6O95382 1288 aa12.19□□□□□ -0.46
HDLBP-239ENST00000483086 LDOC1O95751 146 aaPredicted RBP12.19□□□□□ -0.46
HDLBP-239ENST00000483086 CELA2BP08218 269 aaPredicted RBP12.19□□□□□ -0.46
HDLBP-239ENST00000483086 CR2P20023 1033 aa12.19□□□□□ -0.46
HDLBP-239ENST00000483086 ADKP55263 362 aaKnown RBP12.19□□□□□ -0.46
HDLBP-239ENST00000483086 IL10RBQ08334 325 aa12.19□□□□□ -0.46
HDLBP-239ENST00000483086 PDE1CQ14123 709 aaPredicted RBP12.19□□□□□ -0.46
HDLBP-239ENST00000483086 PIGHQ14442 188 aaPredicted RBP12.19□□□□□ -0.46
HDLBP-239ENST00000483086 ACAP1Q15027 740 aa12.19□□□□□ -0.46
HDLBP-239ENST00000483086 UGP2Q16851 508 aa12.19□□□□□ -0.46
HDLBP-239ENST00000483086 WSCD2Q2TBF2 565 aa12.19□□□□□ -0.46
HDLBP-239ENST00000483086 TMEM52BQ4KMG9 183 aa12.19□□□□□ -0.46
HDLBP-239ENST00000483086 SRLQ86TD4 932 aa12.19□□□□□ -0.46
HDLBP-239ENST00000483086 VPS36Q86VN1 386 aa12.19□□□□□ -0.46
HDLBP-239ENST00000483086 RBFAQ8N0V3 343 aa12.19□□□□□ -0.46
HDLBP-239ENST00000483086 OXR1Q8N573 874 aa12.19□□□□□ -0.46
HDLBP-239ENST00000483086 ZNF564Q8TBZ8 553 aaPredicted RBP12.19□□□□□ -0.46
HDLBP-239ENST00000483086 MDM1Q8TC05 714 aa12.19□□□□□ -0.46
HDLBP-239ENST00000483086 TEKT4Q8WW24 435 aa12.19□□□□□ -0.46
HDLBP-239ENST00000483086 ASB12Q8WXK4 309 aa12.19□□□□□ -0.46
HDLBP-239ENST00000483086 SMIM14Q96QK8 99 aa12.19□□□□□ -0.46
HDLBP-239ENST00000483086 SPTLC3Q9NUV7 552 aa12.19□□□□□ -0.46
HDLBP-239ENST00000483086 ZFC3H1O60293 1989 aaKnown RBP12.18□□□□□ -0.46
HDLBP-239ENST00000483086 A0A0U1RQS6 177 aa12.18□□□□□ -0.46
HDLBP-239ENST00000483086 YKT6O15498 198 aa12.18□□□□□ -0.46
HDLBP-239ENST00000483086 MFSD11O43934 449 aa12.18□□□□□ -0.46
HDLBP-239ENST00000483086 GCATO75600 419 aa12.18□□□□□ -0.46
HDLBP-239ENST00000483086 C6P13671 934 aa12.18□□□□□ -0.46
HDLBP-239ENST00000483086 MMP12P39900 470 aa12.18□□□□□ -0.46
HDLBP-239ENST00000483086 CSNK1DP48730 415 aa12.18□□□□□ -0.46
HDLBP-239ENST00000483086 MAXP61244 160 aa12.18□□□□□ -0.46
HDLBP-239ENST00000483086 CCDC15Q0P6D6 951 aa12.18□□□□□ -0.46
HDLBP-239ENST00000483086 TBX2Q13207 712 aaPredicted RBP12.18□□□□□ -0.46
HDLBP-239ENST00000483086 DPYSL3Q14195 570 aa12.18□□□□□ -0.46
HDLBP-239ENST00000483086 LBRQ14739 615 aaKnown RBP12.18□□□□□ -0.46
HDLBP-239ENST00000483086 IRF4Q15306 451 aa12.18□□□□□ -0.46
HDLBP-239ENST00000483086 SLC18A3Q16572 532 aa12.18□□□□□ -0.46
HDLBP-239ENST00000483086 BOLA3Q53S33 107 aa12.18□□□□□ -0.46
HDLBP-239ENST00000483086 NCBP2-AS2Q69YL0 99 aa12.18□□□□□ -0.46
HDLBP-239ENST00000483086 SPECC1LQ69YQ0 1117 aa12.18□□□□□ -0.46
HDLBP-239ENST00000483086 PLA2G15Q8NCC3 412 aa12.18□□□□□ -0.46
HDLBP-239ENST00000483086 OR4C6Q8NH72 309 aa12.18□□□□□ -0.46
HDLBP-239ENST00000483086 PCDH19Q8TAB3 1148 aa12.18□□□□□ -0.46
HDLBP-239ENST00000483086 ZCCHC14Q8WYQ9 949 aaKnown RBP12.18□□□□□ -0.46
HDLBP-239ENST00000483086 PSKH2Q96QS6 385 aa12.18□□□□□ -0.46
HDLBP-239ENST00000483086 TSPY26PQ9H489 355 aa12.18□□□□□ -0.46
HDLBP-239ENST00000483086 SP110Q9HB58 689 aa12.18□□□□□ -0.46
HDLBP-239ENST00000483086 ABHD10Q9NUJ1 306 aa12.18□□□□□ -0.46
HDLBP-239ENST00000483086 DNAJC28Q9NX36 388 aa12.18□□□□□ -0.46
HDLBP-239ENST00000483086 IP6K2Q9UHH9 426 aa12.18□□□□□ -0.46
HDLBP-239ENST00000483086 FAM208BQ5VWN6 2430 aa12.18□□□□□ -0.46
HDLBP-239ENST00000483086 IGSF10Q6WRI0 2623 aa12.18□□□□□ -0.46
HDLBP-239ENST00000483086 URB1O60287 2271 aaKnown RBP12.17□□□□□ -0.46
HDLBP-239ENST00000483086 MGAQ8IWI9 3026 aa12.17□□□□□ -0.46
HDLBP-239ENST00000483086 A8MX80 341 aa12.17□□□□□ -0.46
HDLBP-239ENST00000483086 H3BRJ5 948 aa12.17□□□□□ -0.46
HDLBP-239ENST00000483086 NEMP1O14524 444 aa12.17□□□□□ -0.46
HDLBP-239ENST00000483086 MFAP3LO75121 409 aa12.17□□□□□ -0.46
HDLBP-239ENST00000483086 RFPL3O75679 317 aa12.17□□□□□ -0.46
HDLBP-239ENST00000483086 TM7SF2O76062 418 aa12.17□□□□□ -0.46
HDLBP-239ENST00000483086 PROSCO94903 275 aa12.17□□□□□ -0.46
HDLBP-239ENST00000483086 CSF2P04141 144 aa12.17□□□□□ -0.46
HDLBP-239ENST00000483086 NME1P15531 152 aaKnown RBP12.17□□□□□ -0.46
HDLBP-239ENST00000483086 GJC1P36383 396 aa12.17□□□□□ -0.46
HDLBP-239ENST00000483086 CDH6P55285 790 aa12.17□□□□□ -0.46
HDLBP-239ENST00000483086 SLC10A2Q12908 348 aaPredicted RBP12.17□□□□□ -0.46
HDLBP-239ENST00000483086 SGCGQ13326 291 aa12.17□□□□□ -0.46
HDLBP-239ENST00000483086 SKOR2Q2VWA4 1001 aaPredicted RBP12.17□□□□□ -0.46
HDLBP-239ENST00000483086 PQLC3Q8N755 202 aa12.17□□□□□ -0.46
HDLBP-239ENST00000483086 DENND6BQ8NEG7 585 aa12.17□□□□□ -0.46
HDLBP-239ENST00000483086 ZNF548Q8NEK5 533 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms