RNA–Protein interactions for RNA: ENST00000466453.1

APP-214, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 374 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-214ENST00000466453 PTPN4P29074 926 aa7.8□□□□□ -1.16
APP-214ENST00000466453 CA7P43166 264 aa7.8□□□□□ -1.16
APP-214ENST00000466453 TSFMP43897 325 aaKnown RBP7.8□□□□□ -1.16
APP-214ENST00000466453 SLC11A2P49281 568 aa7.8□□□□□ -1.16
APP-214ENST00000466453 SMSP52788 366 aa7.8□□□□□ -1.16
APP-214ENST00000466453 GPLD1P80108 840 aa7.8□□□□□ -1.16
APP-214ENST00000466453 HNRNPUQ00839 825 aaKnown RBP eCLIP7.8□□□□□ -1.16
APP-214ENST00000466453 ORC2Q13416 577 aaPredicted RBP7.8□□□□□ -1.16
APP-214ENST00000466453 NNTQ13423 1086 aa7.8□□□□□ -1.16
APP-214ENST00000466453 RAPSNQ13702 412 aa7.8□□□□□ -1.16
APP-214ENST00000466453 ARSHQ5FYA8 562 aa7.8□□□□□ -1.16
APP-214ENST00000466453 BMP2KLQ5H9B9 411 aa7.8□□□□□ -1.16
APP-214ENST00000466453 NYAP1Q6ZVC0 841 aa7.8□□□□□ -1.16
APP-214ENST00000466453 VPS36Q86VN1 386 aa7.8□□□□□ -1.16
APP-214ENST00000466453 MYCT1Q8N699 235 aa7.8□□□□□ -1.16
APP-214ENST00000466453 IGSF22Q8N9C0 903 aa7.8□□□□□ -1.16
APP-214ENST00000466453 TMEM102Q8N9M5 508 aaPredicted RBP7.8□□□□□ -1.16
APP-214ENST00000466453 MBD6Q96DN6 1003 aa7.8□□□□□ -1.16
APP-214ENST00000466453 RNF31Q96EP0 1072 aa7.8□□□□□ -1.16
APP-214ENST00000466453 PDXPQ96GD0 296 aa7.8□□□□□ -1.16
APP-214ENST00000466453 PPP1R16AQ96I34 528 aa7.8□□□□□ -1.16
APP-214ENST00000466453 RUFY1Q96T51 708 aa7.8□□□□□ -1.16
APP-214ENST00000466453 REEP2Q9BRK0 252 aa7.8□□□□□ -1.16
APP-214ENST00000466453 SMYD3Q9H7B4 428 aa7.8□□□□□ -1.16
APP-214ENST00000466453 PARVGQ9HBI0 331 aa7.8□□□□□ -1.16
APP-214ENST00000466453 LHX9Q9NQ69 397 aa7.8□□□□□ -1.16
APP-214ENST00000466453 OLA1Q9NTK5 396 aaKnown RBP7.8□□□□□ -1.16
APP-214ENST00000466453 FAM49BQ9NUQ9 324 aa7.8□□□□□ -1.16
APP-214ENST00000466453 PCDHGC4Q9Y5F7 938 aa7.8□□□□□ -1.16
APP-214ENST00000466453 HCFC1P51610 2035 aa7.79□□□□□ -1.16
APP-214ENST00000466453 TMEM110-MUSTN1A8MSY1 372 aa7.79□□□□□ -1.16
APP-214ENST00000466453 A8MU76 341 aa7.79□□□□□ -1.16
APP-214ENST00000466453 PCDH17O14917 1159 aa7.79□□□□□ -1.16
APP-214ENST00000466453 PROM1O43490 865 aa7.79□□□□□ -1.16
APP-214ENST00000466453 TSPAN6O43657 245 aa7.79□□□□□ -1.16
APP-214ENST00000466453 BNIP3LO60238 219 aa7.79□□□□□ -1.16
APP-214ENST00000466453 ACSL4O60488 711 aa7.79□□□□□ -1.16
APP-214ENST00000466453 KIAA0754O94854 1291 aa7.79□□□□□ -1.16
APP-214ENST00000466453 STAU1O95793 577 aaKnown RBP7.79□□□□□ -1.16
APP-214ENST00000466453 LDHAP00338 332 aaKnown RBP7.79□□□□□ -1.16
APP-214ENST00000466453 CST3P01034 146 aaPredicted RBP7.79□□□□□ -1.16
APP-214ENST00000466453 HTR1BP28222 390 aa7.79□□□□□ -1.16
APP-214ENST00000466453 NUMBP49757 651 aa7.79□□□□□ -1.16
APP-214ENST00000466453 PLK1P53350 603 aa7.79□□□□□ -1.16
APP-214ENST00000466453 YWHAGP61981 247 aaKnown RBP eCLIP7.79□□□□□ -1.16
APP-214ENST00000466453 SLC12A1Q13621 1099 aa7.79□□□□□ -1.16
APP-214ENST00000466453 NFATC4Q14934 902 aa7.79□□□□□ -1.16
APP-214ENST00000466453 KRT79Q5XKE5 535 aa7.79□□□□□ -1.16
APP-214ENST00000466453 HGSNATQ68CP4 663 aa7.79□□□□□ -1.16
APP-214ENST00000466453 KCTD16Q68DU8 428 aa7.79□□□□□ -1.16
APP-214ENST00000466453 FCRL6Q6DN72 434 aa7.79□□□□□ -1.16
APP-214ENST00000466453 NADSYN1Q6IA69 706 aa7.79□□□□□ -1.16
APP-214ENST00000466453 MED25Q71SY5 747 aa7.79□□□□□ -1.16
APP-214ENST00000466453 TRAPPC11Q7Z392 1133 aa7.79□□□□□ -1.16
APP-214ENST00000466453 ZADH2Q8N4Q0 377 aa7.79□□□□□ -1.16
APP-214ENST00000466453 C12orf29Q8N999 325 aa7.79□□□□□ -1.16
APP-214ENST00000466453 OR2A12Q8NGT7 310 aa7.79□□□□□ -1.16
APP-214ENST00000466453 TM9SF4Q92544 642 aa7.79□□□□□ -1.16
APP-214ENST00000466453 RNF34Q969K3 372 aa7.79□□□□□ -1.16
APP-214ENST00000466453 COX4I2Q96KJ9 171 aa7.79□□□□□ -1.16
APP-214ENST00000466453 ESYT1Q9BSJ8 1104 aa7.79□□□□□ -1.16
APP-214ENST00000466453 ST6GALNAC4Q9H4F1 302 aa7.79□□□□□ -1.16
APP-214ENST00000466453 KLQ9UEF7 1012 aa7.79□□□□□ -1.16
APP-214ENST00000466453 NOVA2Q9UNW9 492 aaKnown RBP7.79□□□□□ -1.16
APP-214ENST00000466453 FARP1Q9Y4F1 1045 aaPredicted RBP7.79□□□□□ -1.16
APP-214ENST00000466453 PLEKHM1Q9Y4G2 1056 aa7.79□□□□□ -1.16
APP-214ENST00000466453 GOLGA8IPA6NC78 632 aa7.78□□□□□ -1.16
APP-214ENST00000466453 GOLGA8JA6NMD2 632 aa7.78□□□□□ -1.16
APP-214ENST00000466453 CLIC2O15247 247 aa7.78□□□□□ -1.16
APP-214ENST00000466453 CDC45O75419 566 aa7.78□□□□□ -1.16
APP-214ENST00000466453 CRLF1O75462 422 aa7.78□□□□□ -1.16
APP-214ENST00000466453 FAM13AO94988 1023 aa7.78□□□□□ -1.16
APP-214ENST00000466453 NDUFA10O95299 355 aa7.78□□□□□ -1.16
APP-214ENST00000466453 TNFP01375 233 aa7.78□□□□□ -1.16
APP-214ENST00000466453 IGLV3-27P01718 113 aa7.78□□□□□ -1.16
APP-214ENST00000466453 MT-ND3P03897 115 aa7.78□□□□□ -1.16
APP-214ENST00000466453 PLEKP08567 350 aaPredicted RBP7.78□□□□□ -1.16
APP-214ENST00000466453 PDGFRAP16234 1089 aa7.78□□□□□ -1.16
APP-214ENST00000466453 DNASE1P24855 282 aa7.78□□□□□ -1.16
APP-214ENST00000466453 ADORA2BP29275 332 aa7.78□□□□□ -1.16
APP-214ENST00000466453 HOXC12P31275 282 aa7.78□□□□□ -1.16
APP-214ENST00000466453 DDIT3P35638 169 aa7.78□□□□□ -1.16
APP-214ENST00000466453 SPAM1P38567 509 aa7.78□□□□□ -1.16
APP-214ENST00000466453 TDGF1P3P51864 188 aa7.78□□□□□ -1.16
APP-214ENST00000466453 RRADP55042 308 aa7.78□□□□□ -1.16
APP-214ENST00000466453 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.78□□□□□ -1.167e-7■■□□□ 12.1
APP-214ENST00000466453 SNAP47Q5SQN1 464 aa7.78□□□□□ -1.16
APP-214ENST00000466453 HMBOX1Q6NT76 420 aa7.78□□□□□ -1.16
APP-214ENST00000466453 PODNL1Q6PEZ8 512 aa7.78□□□□□ -1.16
APP-214ENST00000466453 ENPP7Q6UWV6 458 aa7.78□□□□□ -1.16
APP-214ENST00000466453 FAM186BQ8IYM0 893 aa7.78□□□□□ -1.16
APP-214ENST00000466453 CRYBG2Q8N1P7 616 aa7.78□□□□□ -1.16
APP-214ENST00000466453 SH2D3CQ8N5H7 860 aa7.78□□□□□ -1.16
APP-214ENST00000466453 TP53I13Q8NBR0 393 aaPredicted RBP7.78□□□□□ -1.16
APP-214ENST00000466453 SIMC1Q8NDZ2 872 aa7.78□□□□□ -1.16
APP-214ENST00000466453 ATL2Q8NHH9 583 aa7.78□□□□□ -1.16
APP-214ENST00000466453 GRIN3AQ8TCU5 1115 aa7.78□□□□□ -1.16
APP-214ENST00000466453 TAF4BQ92750 862 aa7.78□□□□□ -1.16
APP-214ENST00000466453 AZIN2Q96A70 460 aa7.78□□□□□ -1.16
APP-214ENST00000466453 CCDC114Q96M63 670 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms