RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 GDF10P55107 478 aa14.42□□□□□ -0.1
HMGXB4-204ENST00000455359 ELP6Q0PNE2 266 aa14.42□□□□□ -0.1
HMGXB4-204ENST00000455359 TRAF2Q12933 501 aa14.42□□□□□ -0.1
HMGXB4-204ENST00000455359 UGP2Q16851 508 aa14.42□□□□□ -0.1
HMGXB4-204ENST00000455359 PIP5KL1Q5T9C9 394 aa14.42□□□□□ -0.1
HMGXB4-204ENST00000455359 AGBL4Q5VU57 503 aa14.42□□□□□ -0.1
HMGXB4-204ENST00000455359 ERAP2Q6P179 960 aa14.42□□□□□ -0.1
HMGXB4-204ENST00000455359 CCDC137Q6PK04 289 aaKnown RBP14.42□□□□□ -0.1
HMGXB4-204ENST00000455359 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.42□□□□□ -0.1
HMGXB4-204ENST00000455359 PARS2Q7L3T8 475 aaKnown RBP14.42□□□□□ -0.1
HMGXB4-204ENST00000455359 GSTA5Q7RTV2 222 aa14.42□□□□□ -0.1
HMGXB4-204ENST00000455359 ZNF572Q7Z3I7 529 aaPredicted RBP14.42□□□□□ -0.1
HMGXB4-204ENST00000455359 TTC7BQ86TV6 843 aa14.42□□□□□ -0.1
HMGXB4-204ENST00000455359 CCDC110Q8TBZ0 833 aa14.42□□□□□ -0.1
HMGXB4-204ENST00000455359 CCHCR1Q8TD31 782 aa14.42□□□□□ -0.1
HMGXB4-204ENST00000455359 FOXJ1Q92949 421 aa14.42□□□□□ -0.1
HMGXB4-204ENST00000455359 TOE1Q96GM8 510 aaKnown RBP14.42□□□□□ -0.1
HMGXB4-204ENST00000455359 SRPK1Q96SB4 655 aaKnown RBP14.42□□□□□ -0.1
HMGXB4-204ENST00000455359 NEUROG2Q9H2A3 272 aa14.42□□□□□ -0.1
HMGXB4-204ENST00000455359 PREBQ9HCU5 417 aa14.42□□□□□ -0.1
HMGXB4-204ENST00000455359 SMARCAL1Q9NZC9 954 aa14.42□□□□□ -0.1
HMGXB4-204ENST00000455359 PCYOX1Q9UHG3 505 aa14.42□□□□□ -0.1
HMGXB4-204ENST00000455359 PHTF1Q9UMS5 762 aa14.42□□□□□ -0.1
HMGXB4-204ENST00000455359 CYP8B1Q9UNU6 501 aa14.42□□□□□ -0.1
HMGXB4-204ENST00000455359 PPIL1Q9Y3C6 166 aa14.42□□□□□ -0.1
HMGXB4-204ENST00000455359 PCDHGC4Q9Y5F7 938 aa14.42□□□□□ -0.1
HMGXB4-204ENST00000455359 ATG2BQ96BY7 2078 aa14.42□□□□□ -0.1
HMGXB4-204ENST00000455359 ERI2A8K979 691 aaKnown RBP14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 UPK3BL1B0FP48 263 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 UPK3BL2E5RIL1 263 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 AREL1O15033 823 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 TSPAN6O43657 245 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 PLRG1O43660 514 aaKnown RBP14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 GJB3O75712 270 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 URI1O94763 535 aaPredicted RBP14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 NUDT1P36639 197 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 FDFT1P37268 417 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 TCF15Q12870 199 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 CCDC70Q6NSX1 233 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 TTC27Q6P3X3 843 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 SYDE1Q6ZW31 735 aaPredicted RBP14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 CACUL1Q86Y37 369 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 PAF1Q8N7H5 531 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 OR2T34Q8NGX1 318 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 ZNF592Q92610 1267 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 FEM1CQ96JP0 617 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 ZC3H10Q96K80 434 aaKnown RBP14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 NSMCE3Q96MG7 304 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 RBM15Q96T37 977 aaKnown RBP eCLIP14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 SEMA4AQ9H3S1 761 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 PCDH9Q9HC56 1237 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 SERGEFQ9UGK8 458 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 HCN4Q9Y3Q4 1203 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 PCDHB9Q9Y5E1 797 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 NYNRINQ9P2P1 1898 aaKnown RBP14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 LOC285095A0A1B0GVY8 99 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 TTC24A2A3L6 582 aaPredicted RBP14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 ESPNB1AK53 854 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 C10orf142B7Z368 130 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 PDE2AO00408 941 aaPredicted RBP14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 MAP3K13O43283 966 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 NDUFS2O75306 463 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 RHOBTB1O94844 696 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 ECEL1O95672 775 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 SEMA4FO95754 770 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 CPP00450 1065 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 PRLP01236 227 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 KCNJ1P48048 391 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 GRIA4P48058 902 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 METAP1P53582 386 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 ADPRHP54922 357 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 WNT3AP56704 352 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 CDK18Q07002 472 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 IHHQ14623 411 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 POM121L1PQ3SYA9 428 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 KDELC1Q6UW63 502 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 USP45Q70EL2 814 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 LPCAT2Q7L5N7 544 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 SPATA4Q8NEY3 305 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 PRSS33Q8NF86 280 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 OR14C36Q8NHC7 312 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 SPATA22Q8NHS9 363 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 PIH1D2Q8WWB5 315 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 RLN3Q8WXF3 142 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 IFT43Q96FT9 208 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 SCRN2Q96FV2 425 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 MCCC1Q96RQ3 725 aaPredicted RBP14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 TRIB3Q96RU7 358 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 DUSP15Q9H1R2 295 aaPredicted RBP14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 FADS3Q9Y5Q0 445 aa14.41□□□□□ -0.1
HMGXB4-204ENST00000455359 H0Y858 1186 aa14.4□□□□□ -0.1
HMGXB4-204ENST00000455359 RIOK3O14730 519 aaKnown RBP14.4□□□□□ -0.1
HMGXB4-204ENST00000455359 HRO43593 1189 aa14.4□□□□□ -0.1
HMGXB4-204ENST00000455359 PMPCBO75439 489 aa14.4□□□□□ -0.1
HMGXB4-204ENST00000455359 NDST3O95803 873 aa14.4□□□□□ -0.1
HMGXB4-204ENST00000455359 HLA-DPA1P20036 260 aa14.4□□□□□ -0.1
HMGXB4-204ENST00000455359 PSMB4P28070 264 aa14.4□□□□□ -0.1
HMGXB4-204ENST00000455359 ACSL1P33121 698 aa14.4□□□□□ -0.1
HMGXB4-204ENST00000455359 RPL22P35268 128 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms