RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 PEX11AO75192 247 aa16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 KLKB1P03952 638 aa16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 JUNP05412 331 aaKnown RBP16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 CORO1AP31146 461 aaKnown RBP16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 MAGEA12P43365 314 aa16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 HARS2P49590 506 aaKnown RBP16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 SERINC3Q13530 473 aa16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 SLC12A1Q13621 1099 aa16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 FBXO48Q5FWF7 155 aa16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 SPDYAQ5MJ70 313 aa16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 LRRC8EQ6NSJ5 796 aa16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 CLEC14AQ86T13 490 aa16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 LRRC43Q8N309 656 aa16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 HIPK4Q8NE63 616 aa16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 OR13J1Q8NGT2 312 aa16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 DIS3LQ8TF46 1054 aaKnown RBP16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 RMDN1Q96DB5 314 aa16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 RNF38Q9H0F5 515 aa16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 TREX1Q9NSU2 369 aa16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 OLA1Q9NTK5 396 aaKnown RBP16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 HEATR9A2RTY3 570 aa16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 KRT36O76013 467 aa16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 SORBS2O94875 1100 aaKnown RBP16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 GRK2P25098 689 aa16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 SERPINB5P36952 375 aa16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 EPHB1P54762 984 aa16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 ZNF33AQ06730 810 aa16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 RIPK1Q13546 671 aa16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 ARL10Q8N8L6 244 aa16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 ARRDC2Q8TBH0 407 aa16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 DNMT3LQ9UJW3 386 aa16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 ANKRD12Q6UB98 2062 aa16.94■□□□□ 0.3
LAPTM4B-201ENST00000445593 H7C4K7 107 aa16.93■□□□□ 0.3
LAPTM4B-201ENST00000445593 TSTD2Q5T7W7 516 aa16.93■□□□□ 0.3
LAPTM4B-201ENST00000445593 TMEM198Q66K66 360 aa16.93■□□□□ 0.3
LAPTM4B-201ENST00000445593 C1QTNF1Q9BXJ1 281 aa16.93■□□□□ 0.3
LAPTM4B-201ENST00000445593 LNPEPQ9UIQ6 1025 aa16.93■□□□□ 0.3
LAPTM4B-201ENST00000445593 CAPN14A8MX76 684 aa16.93■□□□□ 0.3
LAPTM4B-201ENST00000445593 DLX3O60479 287 aa16.93■□□□□ 0.3
LAPTM4B-201ENST00000445593 CCDC6Q16204 474 aa16.93■□□□□ 0.3
LAPTM4B-201ENST00000445593 UGP2Q16851 508 aa16.93■□□□□ 0.3
LAPTM4B-201ENST00000445593 USP41Q3LFD5 358 aa16.93■□□□□ 0.3
LAPTM4B-201ENST00000445593 RALGPS1Q5JS13 557 aa16.93■□□□□ 0.3
LAPTM4B-201ENST00000445593 TMC7Q7Z402 723 aa16.93■□□□□ 0.3
LAPTM4B-201ENST00000445593 EFHBQ8N7U6 833 aa16.93■□□□□ 0.3
LAPTM4B-201ENST00000445593 CCDC106Q9BWC9 280 aa16.93■□□□□ 0.3
LAPTM4B-201ENST00000445593 ELAC1Q9H777 363 aaKnown RBP16.93■□□□□ 0.3
LAPTM4B-201ENST00000445593 GPAMQ9HCL2 828 aa16.93■□□□□ 0.3
LAPTM4B-201ENST00000445593 GTSE1Q9NYZ3 720 aa16.93■□□□□ 0.3
LAPTM4B-201ENST00000445593 PRRG1O14668 218 aa16.93■□□□□ 0.3
LAPTM4B-201ENST00000445593 CCDC166P0CW27 439 aa16.93■□□□□ 0.3
LAPTM4B-201ENST00000445593 PAF1Q8N7H5 531 aa16.93■□□□□ 0.3
LAPTM4B-201ENST00000445593 RAB3IL1Q8TBN0 382 aa16.93■□□□□ 0.3
LAPTM4B-201ENST00000445593 CLSTN3Q9BQT9 956 aa16.93■□□□□ 0.3
LAPTM4B-201ENST00000445593 MRPL9Q9BYD2 267 aaKnown RBP16.93■□□□□ 0.3
LAPTM4B-201ENST00000445593 POLR1EQ9GZS1 481 aaKnown RBP16.93■□□□□ 0.3
LAPTM4B-201ENST00000445593 TAGLN3Q9UI15 199 aa16.93■□□□□ 0.3
LAPTM4B-201ENST00000445593 PCDHGC4Q9Y5F7 938 aa16.93■□□□□ 0.3
LAPTM4B-201ENST00000445593 DOCK4Q8N1I0 1966 aa16.93■□□□□ 0.3
LAPTM4B-201ENST00000445593 GREB1Q4ZG55 1949 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 AP3B1O00203 1094 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 ACSL4O60488 711 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 PDE5AO76074 875 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 IL1BP01584 269 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 SERPINA6P08185 405 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 BMP1P13497 986 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 CCND1P24385 295 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 HTR7P34969 479 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 TUBB3Q13509 450 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 THEMIS2Q5TEJ8 643 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 TRIM74Q86UV6 250 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 TRIM73Q86UV7 250 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 SNX31Q8N9S9 440 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 OR6K2Q8NGY2 324 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 ANKRD49Q8WVL7 239 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 SREK1Q8WXA9 508 aaKnown RBP16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 PRICKLE1Q96MT3 831 aaPredicted RBP16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 SLC22A12Q96S37 553 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 MUC3BQ9H195 1237 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 ATP13A1Q9HD20 1204 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 OXSMQ9NWU1 459 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 PLK2Q9NYY3 685 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.92■□□□□ 0.39e-7■■□□□ 14.2
LAPTM4B-201ENST00000445593 ZNF212Q9UDV6 495 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 ZDHHC2Q9UIJ5 367 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 PCDHB12Q9Y5F1 795 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 MIA3Q5JRA6 1907 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 UBA6A0AVT1 1052 aaPredicted RBP16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 FAM92AA1XBS5 289 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 SNAP91O60641 907 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 ZNF189O75820 626 aaPredicted RBP16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 KCNA5P22460 613 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 GNA12Q03113 381 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 ELAVL2Q12926 359 aaKnown RBP16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 ACSBG2Q5FVE4 666 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 DNAJC14Q6Y2X3 702 aaPredicted RBP16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 NSMCE3Q96MG7 304 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 UBE2OQ9C0C9 1292 aaKnown RBP16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 POMKQ9H5K3 350 aa16.92■□□□□ 0.3
LAPTM4B-201ENST00000445593 IL37Q9NZH6 218 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms