RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 HAUS2Q9NVX0 235 aa25.35■■□□□ 1.65
CPNE1-212ENST00000430570 KLHL8Q9P2G9 620 aaPredicted RBP25.35■■□□□ 1.65
CPNE1-212ENST00000430570 AREL1O15033 823 aa25.34■■□□□ 1.65
CPNE1-212ENST00000430570 FANCGO15287 622 aa25.34■■□□□ 1.65
CPNE1-212ENST00000430570 RNGTTO60942 597 aaKnown RBP25.34■■□□□ 1.65
CPNE1-212ENST00000430570 SOCS5O75159 536 aa25.34■■□□□ 1.65
CPNE1-212ENST00000430570 CD86P42081 329 aa25.34■■□□□ 1.65
CPNE1-212ENST00000430570 SEMG2Q02383 582 aa25.34■■□□□ 1.65
CPNE1-212ENST00000430570 CFAP58Q5T655 872 aa25.34■■□□□ 1.65
CPNE1-212ENST00000430570 RASGEF1CQ8N431 466 aa25.34■■□□□ 1.65
CPNE1-212ENST00000430570 RAB7BQ96AH8 199 aa25.34■■□□□ 1.65
CPNE1-212ENST00000430570 IMP4Q96G21 291 aaKnown RBP25.34■■□□□ 1.65
CPNE1-212ENST00000430570 OSBPL9Q96SU4 736 aa25.34■■□□□ 1.65
CPNE1-212ENST00000430570 RBM15Q96T37 977 aaKnown RBP eCLIP25.34■■□□□ 1.652e-7■■■□□ 15.1
CPNE1-212ENST00000430570 VAT1Q99536 393 aa25.34■■□□□ 1.65
CPNE1-212ENST00000430570 SLC25A51Q9H1U9 297 aa25.34■■□□□ 1.65
CPNE1-212ENST00000430570 PREBQ9HCU5 417 aa25.34■■□□□ 1.65
CPNE1-212ENST00000430570 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.34■■□□□ 1.65
CPNE1-212ENST00000430570 SNX12Q9UMY4 172 aa25.34■■□□□ 1.65
CPNE1-212ENST00000430570 ZFR2Q9UPR6 939 aaKnown RBP25.34■■□□□ 1.65
CPNE1-212ENST00000430570 PCDHB9Q9Y5E1 797 aa25.34■■□□□ 1.65
CPNE1-212ENST00000430570 SLCO1B1Q9Y6L6 691 aa25.34■■□□□ 1.65
CPNE1-212ENST00000430570 ATXN2Q99700 1313 aaKnown RBP25.33■■□□□ 1.65
CPNE1-212ENST00000430570 MEI4A8MW99 385 aa25.33■■□□□ 1.64
CPNE1-212ENST00000430570 UPK3BL1B0FP48 263 aa25.33■■□□□ 1.64
CPNE1-212ENST00000430570 UPK3BL2E5RIL1 263 aa25.33■■□□□ 1.64
CPNE1-212ENST00000430570 AP1G1O43747 822 aa25.33■■□□□ 1.64
CPNE1-212ENST00000430570 LIASO43766 372 aa25.33■■□□□ 1.64
CPNE1-212ENST00000430570 FZD6O60353 706 aa25.33■■□□□ 1.64
CPNE1-212ENST00000430570 PCDH8O95206 1070 aa25.33■■□□□ 1.64
CPNE1-212ENST00000430570 RETP07949 1114 aa25.33■■□□□ 1.64
CPNE1-212ENST00000430570 PDHA1P08559 390 aa25.33■■□□□ 1.64
CPNE1-212ENST00000430570 NFKB1P19838 968 aa25.33■■□□□ 1.64
CPNE1-212ENST00000430570 CCDC6Q16204 474 aa25.33■■□□□ 1.64
CPNE1-212ENST00000430570 LONRF2Q1L5Z9 754 aa25.33■■□□□ 1.64
CPNE1-212ENST00000430570 RGL4Q8IZJ4 473 aa25.33■■□□□ 1.64
CPNE1-212ENST00000430570 DCLK2Q8N568 766 aa25.33■■□□□ 1.64
CPNE1-212ENST00000430570 SPATA22Q8NHS9 363 aa25.33■■□□□ 1.64
CPNE1-212ENST00000430570 DNASE2BQ8WZ79 361 aa25.33■■□□□ 1.64
CPNE1-212ENST00000430570 SNX19Q92543 992 aa25.33■■□□□ 1.64
CPNE1-212ENST00000430570 PIGKQ92643 395 aa25.33■■□□□ 1.64
CPNE1-212ENST00000430570 ORAI3Q9BRQ5 295 aa25.33■■□□□ 1.64
CPNE1-212ENST00000430570 PCDH12Q9NPG4 1184 aa25.33■■□□□ 1.64
CPNE1-212ENST00000430570 EIF2B4Q9UI10 523 aaKnown RBP25.33■■□□□ 1.64
CPNE1-212ENST00000430570 VPS13AQ96RL7 3174 aa25.33■■□□□ 1.64
CPNE1-212ENST00000430570 DOCK9Q9BZ29 2069 aa25.32■■□□□ 1.64
CPNE1-212ENST00000430570 A0A1W2PQU0 124 aa25.32■■□□□ 1.64
CPNE1-212ENST00000430570 F5H423 210 aaPredicted RBP25.32■■□□□ 1.64
CPNE1-212ENST00000430570 ZNF185O15231 689 aa25.32■■□□□ 1.64
CPNE1-212ENST00000430570 PGLSO95336 258 aa25.32■■□□□ 1.64
CPNE1-212ENST00000430570 PRLP01236 227 aa25.32■■□□□ 1.64
CPNE1-212ENST00000430570 SERPINF2P08697 491 aa25.32■■□□□ 1.64
CPNE1-212ENST00000430570 MAT2AP31153 395 aaKnown RBP25.32■■□□□ 1.64
CPNE1-212ENST00000430570 CCR5P51681 352 aa25.32■■□□□ 1.64
CPNE1-212ENST00000430570 GDF10P55107 478 aa25.32■■□□□ 1.64
CPNE1-212ENST00000430570 SNX1Q13596 522 aa25.32■■□□□ 1.64
CPNE1-212ENST00000430570 CYP2U1Q7Z449 544 aa25.32■■□□□ 1.64
CPNE1-212ENST00000430570 PAF1Q8N7H5 531 aa25.32■■□□□ 1.64
CPNE1-212ENST00000430570 KLK6Q92876 244 aa25.32■■□□□ 1.64
CPNE1-212ENST00000430570 TADA1Q96BN2 335 aa25.32■■□□□ 1.64
CPNE1-212ENST00000430570 TMEM121Q9BTD3 319 aa25.32■■□□□ 1.64
CPNE1-212ENST00000430570 TDRD1Q9BXT4 1180 aaKnown RBP25.32■■□□□ 1.64
CPNE1-212ENST00000430570 SMARCAL1Q9NZC9 954 aa25.32■■□□□ 1.64
CPNE1-212ENST00000430570 GMEB2Q9UKD1 530 aa25.32■■□□□ 1.64
CPNE1-212ENST00000430570 PILRBQ9UKJ0 227 aa25.32■■□□□ 1.64
CPNE1-212ENST00000430570 CHKBQ9Y259 395 aa25.32■■□□□ 1.64
CPNE1-212ENST00000430570 RIOK3O14730 519 aaKnown RBP25.31■■□□□ 1.64
CPNE1-212ENST00000430570 MT-CYBP00156 380 aaPredicted RBP25.31■■□□□ 1.64
CPNE1-212ENST00000430570 XPAP23025 273 aaPredicted RBP25.31■■□□□ 1.64
CPNE1-212ENST00000430570 PTPRRQ15256 657 aa25.31■■□□□ 1.64
CPNE1-212ENST00000430570 OASLQ15646 514 aaKnown RBP25.31■■□□□ 1.64
CPNE1-212ENST00000430570 ANKRD20A2Q5SQ80 823 aa25.31■■□□□ 1.64
CPNE1-212ENST00000430570 SYCP2LQ5T4T6 812 aa25.31■■□□□ 1.64
CPNE1-212ENST00000430570 ARMC12Q5T9G4 340 aa25.31■■□□□ 1.64
CPNE1-212ENST00000430570 ANKRD20A1Q5TYW2 823 aa25.31■■□□□ 1.64
CPNE1-212ENST00000430570 ANKRD20A3Q5VUR7 823 aa25.31■■□□□ 1.64
CPNE1-212ENST00000430570 SEL1L3Q68CR1 1132 aa25.31■■□□□ 1.64
CPNE1-212ENST00000430570 NEK5Q6P3R8 708 aa25.31■■□□□ 1.64
CPNE1-212ENST00000430570 TRIM69Q86WT6 500 aa25.31■■□□□ 1.64
CPNE1-212ENST00000430570 FAM71DQ8N9W8 422 aa25.31■■□□□ 1.64
CPNE1-212ENST00000430570 CCDC110Q8TBZ0 833 aa25.31■■□□□ 1.64
CPNE1-212ENST00000430570 PIH1D2Q8WWB5 315 aa25.31■■□□□ 1.64
CPNE1-212ENST00000430570 SMIM14Q96QK8 99 aa25.31■■□□□ 1.64
CPNE1-212ENST00000430570 FRMD8P1Q9BZ68 369 aaPredicted RBP25.31■■□□□ 1.64
CPNE1-212ENST00000430570 UBP1Q9NZI7 540 aa25.31■■□□□ 1.64
CPNE1-212ENST00000430570 NCDNQ9UBB6 729 aa25.31■■□□□ 1.64
CPNE1-212ENST00000430570 TRHDEQ9UKU6 1024 aa25.31■■□□□ 1.64
CPNE1-212ENST00000430570 TSPAN6O43657 245 aa25.3■■□□□ 1.64
CPNE1-212ENST00000430570 CPP00450 1065 aa25.3■■□□□ 1.64
CPNE1-212ENST00000430570 WDR45BQ5MNZ6 344 aa25.3■■□□□ 1.64
CPNE1-212ENST00000430570 HORMAD1Q86X24 394 aa25.3■■□□□ 1.64
CPNE1-212ENST00000430570 MAIP1Q8WWC4 291 aa25.3■■□□□ 1.64
CPNE1-212ENST00000430570 SPOCK2Q92563 424 aa25.3■■□□□ 1.64
CPNE1-212ENST00000430570 FEM1CQ96JP0 617 aa25.3■■□□□ 1.64
CPNE1-212ENST00000430570 FCRL5Q96RD9 977 aa25.3■■□□□ 1.64
CPNE1-212ENST00000430570 NAPGQ99747 312 aaPredicted RBP25.3■■□□□ 1.64
CPNE1-212ENST00000430570 MIR1-1HGQ9H1L0 117 aa25.3■■□□□ 1.64
CPNE1-212ENST00000430570 SMOC1Q9H4F8 434 aa25.3■■□□□ 1.64
CPNE1-212ENST00000430570 PHTF1Q9UMS5 762 aa25.3■■□□□ 1.64
CPNE1-212ENST00000430570 PCDHGA5Q9Y5G8 931 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms