RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 ELP6Q0PNE2 266 aa21.49■■□□□ 1.03
FXN-202ENST00000396364 CNTN1Q12860 1018 aa21.49■■□□□ 1.03
FXN-202ENST00000396364 PPP1R7Q15435 360 aa21.49■■□□□ 1.03
FXN-202ENST00000396364 AADATQ8N5Z0 425 aa21.49■■□□□ 1.03
FXN-202ENST00000396364 SPOCK2Q92563 424 aa21.49■■□□□ 1.03
FXN-202ENST00000396364 ARRDC3Q96B67 414 aa21.49■■□□□ 1.03
FXN-202ENST00000396364 ECHDC3Q96DC8 303 aa21.49■■□□□ 1.03
FXN-202ENST00000396364 PCDH9Q9HC56 1237 aa21.49■■□□□ 1.03
FXN-202ENST00000396364 PCYOX1Q9UHG3 505 aa21.49■■□□□ 1.03
FXN-202ENST00000396364 TPX2Q9ULW0 747 aaKnown RBP21.49■■□□□ 1.03
FXN-202ENST00000396364 PHTF1Q9UMS5 762 aa21.49■■□□□ 1.03
FXN-202ENST00000396364 PCDHB9Q9Y5E1 797 aa21.49■■□□□ 1.03
FXN-202ENST00000396364 ERI2A8K979 691 aaKnown RBP21.48■■□□□ 1.03
FXN-202ENST00000396364 NEMP1O14524 444 aa21.48■■□□□ 1.03
FXN-202ENST00000396364 TRAFD1O14545 582 aaPredicted RBP21.48■■□□□ 1.03
FXN-202ENST00000396364 RPP40O75818 363 aaKnown RBP21.48■■□□□ 1.03
FXN-202ENST00000396364 PGLSO95336 258 aa21.48■■□□□ 1.03
FXN-202ENST00000396364 PSMB4P28070 264 aa21.48■■□□□ 1.03
FXN-202ENST00000396364 DRD3P35462 400 aa21.48■■□□□ 1.03
FXN-202ENST00000396364 P2RY2P41231 377 aa21.48■■□□□ 1.03
FXN-202ENST00000396364 LMAN1P49257 510 aa21.48■■□□□ 1.03
FXN-202ENST00000396364 UGP2Q16851 508 aa21.48■■□□□ 1.03
FXN-202ENST00000396364 SYDE1Q6ZW31 735 aaPredicted RBP21.48■■□□□ 1.03
FXN-202ENST00000396364 PARS2Q7L3T8 475 aaKnown RBP21.48■■□□□ 1.03
FXN-202ENST00000396364 SPATA4Q8NEY3 305 aa21.48■■□□□ 1.03
FXN-202ENST00000396364 GAB3Q8WWW8 586 aa21.48■■□□□ 1.03
FXN-202ENST00000396364 NELL1Q92832 810 aa21.48■■□□□ 1.03
FXN-202ENST00000396364 DDX47Q9H0S4 455 aaKnown RBP21.48■■□□□ 1.03
FXN-202ENST00000396364 NEUROG2Q9H2A3 272 aa21.48■■□□□ 1.03
FXN-202ENST00000396364 PLXND1Q9Y4D7 1925 aa21.48■■□□□ 1.03
FXN-202ENST00000396364 ZNF318Q5VUA4 2279 aa21.48■■□□□ 1.03
FXN-202ENST00000396364 UPK3BL1B0FP48 263 aa21.47■■□□□ 1.03
FXN-202ENST00000396364 UPK3BL2E5RIL1 263 aa21.47■■□□□ 1.03
FXN-202ENST00000396364 PMPCBO75439 489 aa21.47■■□□□ 1.03
FXN-202ENST00000396364 GJB3O75712 270 aa21.47■■□□□ 1.03
FXN-202ENST00000396364 EPOP01588 193 aa21.47■■□□□ 1.03
FXN-202ENST00000396364 MMP2P08253 660 aa21.47■■□□□ 1.03
FXN-202ENST00000396364 GRIA4P48058 902 aa21.47■■□□□ 1.03
FXN-202ENST00000396364 CDK18Q07002 472 aa21.47■■□□□ 1.03
FXN-202ENST00000396364 TRAF2Q12933 501 aa21.47■■□□□ 1.03
FXN-202ENST00000396364 DHX34Q14147 1143 aaKnown RBP21.47■■□□□ 1.03
FXN-202ENST00000396364 PCSK7Q16549 785 aa21.47■■□□□ 1.03
FXN-202ENST00000396364 MAP7D1Q3KQU3 841 aa21.47■■□□□ 1.03
FXN-202ENST00000396364 USP45Q70EL2 814 aa21.47■■□□□ 1.03
FXN-202ENST00000396364 PRPF39Q86UA1 669 aaKnown RBP21.47■■□□□ 1.03
FXN-202ENST00000396364 FAM124AQ86V42 546 aa21.47■■□□□ 1.03
FXN-202ENST00000396364 KLHL7Q8IXQ5 586 aa21.47■■□□□ 1.03
FXN-202ENST00000396364 OR14C36Q8NHC7 312 aa21.47■■□□□ 1.03
FXN-202ENST00000396364 SPATA22Q8NHS9 363 aa21.47■■□□□ 1.03
FXN-202ENST00000396364 SLCO2A1Q92959 643 aa21.47■■□□□ 1.03
FXN-202ENST00000396364 FEM1CQ96JP0 617 aa21.47■■□□□ 1.03
FXN-202ENST00000396364 SRPK1Q96SB4 655 aaKnown RBP21.47■■□□□ 1.03
FXN-202ENST00000396364 PCED1AQ9H1Q7 454 aa21.47■■□□□ 1.03
FXN-202ENST00000396364 PREBQ9HCU5 417 aa21.47■■□□□ 1.03
FXN-202ENST00000396364 HCN4Q9Y3Q4 1203 aa21.47■■□□□ 1.03
FXN-202ENST00000396364 MRFAP1Q9Y605 127 aa21.47■■□□□ 1.03
FXN-202ENST00000396364 IGHV1OR15-9A0A0B4J2B8 117 aa21.46■■□□□ 1.03
FXN-202ENST00000396364 PDE2AO00408 941 aaPredicted RBP21.46■■□□□ 1.03
FXN-202ENST00000396364 TSPAN6O43657 245 aa21.46■■□□□ 1.03
FXN-202ENST00000396364 PLRG1O43660 514 aaKnown RBP21.46■■□□□ 1.03
FXN-202ENST00000396364 AP1G1O43747 822 aa21.46■■□□□ 1.03
FXN-202ENST00000396364 SEMA4FO95754 770 aa21.46■■□□□ 1.03
FXN-202ENST00000396364 MT-CYBP00156 380 aaPredicted RBP21.46■■□□□ 1.03
FXN-202ENST00000396364 KRT14P02533 472 aa21.46■■□□□ 1.03
FXN-202ENST00000396364 CYP2A6P11509 494 aaPredicted RBP21.46■■□□□ 1.03
FXN-202ENST00000396364 PTPN5P54829 565 aa21.46■■□□□ 1.03
FXN-202ENST00000396364 DR1Q01658 176 aa21.46■■□□□ 1.03
FXN-202ENST00000396364 DMWDQ09019 674 aa21.46■■□□□ 1.03
FXN-202ENST00000396364 AGBL4Q5VU57 503 aa21.46■■□□□ 1.03
FXN-202ENST00000396364 NEK5Q6P3R8 708 aa21.46■■□□□ 1.03
FXN-202ENST00000396364 TTC27Q6P3X3 843 aa21.46■■□□□ 1.03
FXN-202ENST00000396364 CEP68Q76N32 757 aa21.46■■□□□ 1.03
FXN-202ENST00000396364 ZNF572Q7Z3I7 529 aaPredicted RBP21.46■■□□□ 1.03
FXN-202ENST00000396364 MAATS1Q7Z4T9 603 aa21.46■■□□□ 1.03
FXN-202ENST00000396364 ZBTB44Q8NCP5 570 aa21.46■■□□□ 1.03
FXN-202ENST00000396364 IPMKQ8NFU5 416 aa21.46■■□□□ 1.03
FXN-202ENST00000396364 OR2T34Q8NGX1 318 aa21.46■■□□□ 1.03
FXN-202ENST00000396364 RLN3Q8WXF3 142 aa21.46■■□□□ 1.03
FXN-202ENST00000396364 FAM131CQ96AQ9 280 aa21.46■■□□□ 1.03
FXN-202ENST00000396364 TADA1Q96BN2 335 aa21.46■■□□□ 1.03
FXN-202ENST00000396364 RMDN1Q96DB5 314 aa21.46■■□□□ 1.03
FXN-202ENST00000396364 TOE1Q96GM8 510 aaKnown RBP21.46■■□□□ 1.03
FXN-202ENST00000396364 LRRC40Q9H9A6 602 aa21.46■■□□□ 1.03
FXN-202ENST00000396364 RAB6BQ9NRW1 208 aa21.46■■□□□ 1.03
FXN-202ENST00000396364 WSB2Q9NYS7 404 aaPredicted RBP21.46■■□□□ 1.03
FXN-202ENST00000396364 UBP1Q9NZI7 540 aa21.46■■□□□ 1.03
FXN-202ENST00000396364 NDST3O95803 873 aa21.45■■□□□ 1.02
FXN-202ENST00000396364 HLA-DPA1P20036 260 aa21.45■■□□□ 1.02
FXN-202ENST00000396364 ADPRHP54922 357 aa21.45■■□□□ 1.02
FXN-202ENST00000396364 WNT3AP56704 352 aa21.45■■□□□ 1.02
FXN-202ENST00000396364 ELF2Q15723 593 aa21.45■■□□□ 1.02
FXN-202ENST00000396364 PIP5KL1Q5T9C9 394 aa21.45■■□□□ 1.02
FXN-202ENST00000396364 NAPEPLDQ6IQ20 393 aa21.45■■□□□ 1.02
FXN-202ENST00000396364 LINC00523Q86TU6 105 aa21.45■■□□□ 1.02
FXN-202ENST00000396364 CEP112Q8N8E3 955 aa21.45■■□□□ 1.02
FXN-202ENST00000396364 CHKBQ9Y259 395 aa21.45■■□□□ 1.02
FXN-202ENST00000396364 TBC1D3DA0A087WVF3 549 aa21.44■■□□□ 1.02
FXN-202ENST00000396364 TBC1D3IA0A087WXS9 549 aa21.44■■□□□ 1.02
FXN-202ENST00000396364 TBC1D3EA0A087X179 549 aa21.44■■□□□ 1.02
FXN-202ENST00000396364 TBC1D3KA0A087X1G2 549 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms