RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 CFAP61Q8NHU2 1237 aa14.4□□□□□ -0.1
CLCN4-201ENST00000380829 SHKBP1Q8TBC3 707 aa14.4□□□□□ -0.1
CLCN4-201ENST00000380829 NSL1Q96IY1 281 aa14.4□□□□□ -0.1
CLCN4-201ENST00000380829 VPS39Q96JC1 886 aa14.4□□□□□ -0.1
CLCN4-201ENST00000380829 SLC25A51Q9H1U9 297 aa14.4□□□□□ -0.1
CLCN4-201ENST00000380829 KCNK13Q9HB14 408 aa14.4□□□□□ -0.1
CLCN4-201ENST00000380829 TMEM216Q9P0N5 145 aa14.4□□□□□ -0.1
CLCN4-201ENST00000380829 DCDC2Q9UHG0 476 aa14.4□□□□□ -0.1
CLCN4-201ENST00000380829 DNMT3LQ9UJW3 386 aa14.4□□□□□ -0.1
CLCN4-201ENST00000380829 HNRNPCL1O60812 293 aaKnown RBP14.39□□□□□ -0.11
CLCN4-201ENST00000380829 GJB3O75712 270 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 VAPBO95292 243 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 PARNO95453 639 aaKnown RBP14.39□□□□□ -0.11
CLCN4-201ENST00000380829 PRKCGP05129 697 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 HNRNPCP07910 306 aaKnown RBP eCLIP14.39□□□□□ -0.11
CLCN4-201ENST00000380829 DLDP09622 509 aaKnown RBP14.39□□□□□ -0.11
CLCN4-201ENST00000380829 PABPC4LP0CB38 370 aaKnown RBP14.39□□□□□ -0.11
CLCN4-201ENST00000380829 SAT1P21673 171 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 DNAJB2P25686 324 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 SERPINB8P50452 374 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 IRF9Q00978 393 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 MAP7Q14244 749 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 IHHQ14623 411 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 SPDYAQ5MJ70 313 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 ATG16L1Q676U5 607 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 PDPK2PQ6A1A2 396 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 CNKSR3Q6P9H4 555 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 KDELC1Q6UW63 502 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 PLD6Q8N2A8 252 aaKnown RBP14.39□□□□□ -0.11
CLCN4-201ENST00000380829 IMP4Q96G21 291 aaKnown RBP14.39□□□□□ -0.11
CLCN4-201ENST00000380829 PHF12Q96QT6 1004 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 TMEM120AQ9BXJ8 343 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 CYP4F11Q9HBI6 524 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 TMEM39AQ9NV64 488 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 DDX18Q9NVP1 670 aaKnown RBP14.39□□□□□ -0.11
CLCN4-201ENST00000380829 NDE1Q9NXR1 346 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 MARCOQ9UEW3 520 aaPredicted RBP14.39□□□□□ -0.11
CLCN4-201ENST00000380829 TBX21Q9UL17 535 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 TCAF1Q9Y4C2 921 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 BACE2Q9Y5Z0 518 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 F5H5T6 163 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 COCHO43405 550 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 KITP10721 976 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 ESRRAP11474 423 aaPredicted RBP14.39□□□□□ -0.11
CLCN4-201ENST00000380829 ARFIP2P53365 341 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 ZBTB16Q05516 673 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 CNGA3Q16281 694 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 RIPOR1Q6ZS17 1223 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 DENND6AQ8IWF6 608 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 PGBD5Q8N414 524 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 PPP1R14CQ8TAE6 165 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 TOX2Q96NM4 488 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 PANX3Q96QZ0 392 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 SLC39A10Q9ULF5 831 aa14.39□□□□□ -0.11
CLCN4-201ENST00000380829 A0A096LPK6 155 aa14.38□□□□□ -0.11
CLCN4-201ENST00000380829 ZNF840PA6NDX5 716 aa14.38□□□□□ -0.11
CLCN4-201ENST00000380829 BIRC5O15392 142 aa14.38□□□□□ -0.11
CLCN4-201ENST00000380829 MMP2P08253 660 aa14.38□□□□□ -0.11
CLCN4-201ENST00000380829 CCDC166P0CW27 439 aa14.38□□□□□ -0.11
CLCN4-201ENST00000380829 HMGA1P17096 107 aaKnown RBP14.38□□□□□ -0.11
CLCN4-201ENST00000380829 ARNTP27540 789 aa14.38□□□□□ -0.11
CLCN4-201ENST00000380829 MAGEA12P43365 314 aa14.38□□□□□ -0.11
CLCN4-201ENST00000380829 DEFB103AP81534 67 aa14.38□□□□□ -0.11
CLCN4-201ENST00000380829 MPP1Q00013 466 aa14.38□□□□□ -0.11
CLCN4-201ENST00000380829 PLOD1Q02809 727 aaPredicted RBP14.38□□□□□ -0.11
CLCN4-201ENST00000380829 CTBP1Q13363 440 aa14.38□□□□□ -0.11
CLCN4-201ENST00000380829 SERINC3Q13530 473 aa14.38□□□□□ -0.11
CLCN4-201ENST00000380829 GRM3Q14832 879 aa14.38□□□□□ -0.11
CLCN4-201ENST00000380829 POTEHQ6S545 545 aa14.38□□□□□ -0.11
CLCN4-201ENST00000380829 DENND1CQ8IV53 801 aa14.38□□□□□ -0.11
CLCN4-201ENST00000380829 ARID3BQ8IVW6 561 aaPredicted RBP14.38□□□□□ -0.11
CLCN4-201ENST00000380829 ZNF398Q8TD17 642 aa14.38□□□□□ -0.11
CLCN4-201ENST00000380829 AUTS2Q8WXX7 1259 aa14.38□□□□□ -0.11
CLCN4-201ENST00000380829 ISL2Q96A47 359 aa14.38□□□□□ -0.11
CLCN4-201ENST00000380829 PPP1R2P1Q96PQ5 205 aa14.38□□□□□ -0.11
CLCN4-201ENST00000380829 MCMBPQ9BTE3 642 aa14.38□□□□□ -0.11
CLCN4-201ENST00000380829 BEGAINQ9BUH8 593 aa14.38□□□□□ -0.11
CLCN4-201ENST00000380829 GKN1Q9NS71 199 aa14.38□□□□□ -0.11
CLCN4-201ENST00000380829 AFF4Q9UHB7 1163 aaKnown RBP14.38□□□□□ -0.11
CLCN4-201ENST00000380829 COL4A6Q14031 1691 aa14.38□□□□□ -0.11
CLCN4-201ENST00000380829 A0A0D9SEW6 157 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 TGDSO95455 350 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 PROCP04070 461 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 SOD2P04179 222 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 MYL2P10916 166 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 GABRB3P28472 473 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 CRABP2P29373 138 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 GALK1P51570 392 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 KPNA1P52294 538 aaPredicted RBP14.37□□□□□ -0.11
CLCN4-201ENST00000380829 CSE1LP55060 971 aaKnown RBP14.37□□□□□ -0.11
CLCN4-201ENST00000380829 CBX3Q13185 183 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 STX3Q13277 289 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 PLD1Q13393 1074 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 PCLAFQ15004 111 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 PARP15Q460N3 678 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 TNS4Q8IZW8 715 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 ZNF461Q8TAF7 563 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 C7orf26Q96N11 449 aa14.37□□□□□ -0.11
CLCN4-201ENST00000380829 HBS1LQ9Y450 684 aaKnown RBP14.37□□□□□ -0.11
CLCN4-201ENST00000380829 ACTL7AQ9Y615 435 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms