RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 CPP00450 1065 aa14.01□□□□□ -0.17
TPM3-211ENST00000368531 PDHA1P08559 390 aa14.01□□□□□ -0.17
TPM3-211ENST00000368531 ADRB3P13945 408 aa14.01□□□□□ -0.17
TPM3-211ENST00000368531 CTPS1P17812 591 aa14.01□□□□□ -0.17
TPM3-211ENST00000368531 OXTRP30559 389 aa14.01□□□□□ -0.17
TPM3-211ENST00000368531 ABL2P42684 1182 aa14.01□□□□□ -0.17
TPM3-211ENST00000368531 VPS41P49754 854 aa14.01□□□□□ -0.17
TPM3-211ENST00000368531 EPHB1P54762 984 aa14.01□□□□□ -0.17
TPM3-211ENST00000368531 CCDC15Q0P6D6 951 aa14.01□□□□□ -0.17
TPM3-211ENST00000368531 TCF15Q12870 199 aa14.01□□□□□ -0.17
TPM3-211ENST00000368531 PRPSAP1Q14558 356 aa14.01□□□□□ -0.17
TPM3-211ENST00000368531 SYCP2LQ5T4T6 812 aa14.01□□□□□ -0.17
TPM3-211ENST00000368531 PIP5KL1Q5T9C9 394 aa14.01□□□□□ -0.17
TPM3-211ENST00000368531 AGBL4Q5VU57 503 aa14.01□□□□□ -0.17
TPM3-211ENST00000368531 C12orf50Q8NA57 414 aaPredicted RBP14.01□□□□□ -0.17
TPM3-211ENST00000368531 IPMKQ8NFU5 416 aa14.01□□□□□ -0.17
TPM3-211ENST00000368531 GAB3Q8WWW8 586 aa14.01□□□□□ -0.17
TPM3-211ENST00000368531 NELL1Q92832 810 aa14.01□□□□□ -0.17
TPM3-211ENST00000368531 OXNAD1Q96HP4 312 aaPredicted RBP14.01□□□□□ -0.17
TPM3-211ENST00000368531 PRRX2Q99811 253 aa14.01□□□□□ -0.17
TPM3-211ENST00000368531 HDAC8Q9BY41 377 aa14.01□□□□□ -0.17
TPM3-211ENST00000368531 PCDH9Q9HC56 1237 aa14.01□□□□□ -0.17
TPM3-211ENST00000368531 WSB2Q9NYS7 404 aaPredicted RBP14.01□□□□□ -0.17
TPM3-211ENST00000368531 DKK3Q9UBP4 350 aa14.01□□□□□ -0.17
TPM3-211ENST00000368531 FAM153AQ9UHL3 310 aa14.01□□□□□ -0.17
TPM3-211ENST00000368531 CDC23Q9UJX2 597 aa14.01□□□□□ -0.17
TPM3-211ENST00000368531 FZD4Q9ULV1 537 aa14.01□□□□□ -0.17
TPM3-211ENST00000368531 ITM2BQ9Y287 266 aa14.01□□□□□ -0.17
TPM3-211ENST00000368531 DOCK9Q9BZ29 2069 aa14.01□□□□□ -0.17
TPM3-211ENST00000368531 MUC3AQ02505 3323 aa14.01□□□□□ -0.17
TPM3-211ENST00000368531 ABCA7Q8IZY2 2146 aa14□□□□□ -0.17
TPM3-211ENST00000368531 TBC1D3DA0A087WVF3 549 aa14□□□□□ -0.17
TPM3-211ENST00000368531 TBC1D3IA0A087WXS9 549 aa14□□□□□ -0.17
TPM3-211ENST00000368531 TBC1D3EA0A087X179 549 aa14□□□□□ -0.17
TPM3-211ENST00000368531 TBC1D3KA0A087X1G2 549 aa14□□□□□ -0.17
TPM3-211ENST00000368531 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14□□□□□ -0.17
TPM3-211ENST00000368531 TBC1D3FA6NER0 549 aaPredicted RBP14□□□□□ -0.17
TPM3-211ENST00000368531 UPK3BL1B0FP48 263 aa14□□□□□ -0.17
TPM3-211ENST00000368531 ESPNB1AK53 854 aa14□□□□□ -0.17
TPM3-211ENST00000368531 TBC1D3LB9A6J9 549 aa14□□□□□ -0.17
TPM3-211ENST00000368531 UPK3BL2E5RIL1 263 aa14□□□□□ -0.17
TPM3-211ENST00000368531 NEMP1O14524 444 aa14□□□□□ -0.17
TPM3-211ENST00000368531 HTRA2O43464 458 aaPredicted RBP14□□□□□ -0.17
TPM3-211ENST00000368531 PCDH8O95206 1070 aa14□□□□□ -0.17
TPM3-211ENST00000368531 PGLSO95336 258 aa14□□□□□ -0.17
TPM3-211ENST00000368531 SEMA4FO95754 770 aa14□□□□□ -0.17
TPM3-211ENST00000368531 KRT14P02533 472 aa14□□□□□ -0.17
TPM3-211ENST00000368531 TBC1D3HP0C7X1 549 aa14□□□□□ -0.17
TPM3-211ENST00000368531 CA4P22748 312 aa14□□□□□ -0.17
TPM3-211ENST00000368531 RPL22P35268 128 aaKnown RBP14□□□□□ -0.17
TPM3-211ENST00000368531 ADPRHP54922 357 aa14□□□□□ -0.17
TPM3-211ENST00000368531 GEMP55040 296 aa14□□□□□ -0.17
TPM3-211ENST00000368531 WNT3AP56704 352 aa14□□□□□ -0.17
TPM3-211ENST00000368531 TAS2R38P59533 333 aa14□□□□□ -0.17
TPM3-211ENST00000368531 FAM193AP78312 1265 aa14□□□□□ -0.17
TPM3-211ENST00000368531 RPL6Q02878 288 aaKnown RBP14□□□□□ -0.17
TPM3-211ENST00000368531 LMNB2Q03252 620 aa14□□□□□ -0.17
TPM3-211ENST00000368531 C2orf54Q08AI8 447 aa14□□□□□ -0.17
TPM3-211ENST00000368531 GALNT3Q14435 633 aa14□□□□□ -0.17
TPM3-211ENST00000368531 SPARCL1Q14515 664 aa14□□□□□ -0.17
TPM3-211ENST00000368531 PTPRRQ15256 657 aa14□□□□□ -0.17
TPM3-211ENST00000368531 LPAL2Q16609 132 aa14□□□□□ -0.17
TPM3-211ENST00000368531 UGP2Q16851 508 aa14□□□□□ -0.17
TPM3-211ENST00000368531 PARP6Q2NL67 630 aa14□□□□□ -0.17
TPM3-211ENST00000368531 P3H1Q32P28 736 aa14□□□□□ -0.17
TPM3-211ENST00000368531 DNTTIP2Q5QJE6 756 aaKnown RBP14□□□□□ -0.17
TPM3-211ENST00000368531 TBC1D3GQ6DHY5 549 aa14□□□□□ -0.17
TPM3-211ENST00000368531 TBC1D3CQ6IPX1 549 aa14□□□□□ -0.17
TPM3-211ENST00000368531 BRAT1Q6PJG6 821 aa14□□□□□ -0.17
TPM3-211ENST00000368531 PRR23BQ6ZRT6 265 aa14□□□□□ -0.17
TPM3-211ENST00000368531 TMEFF1Q8IYR6 380 aa14□□□□□ -0.17
TPM3-211ENST00000368531 TBC1D3Q8IZP1 549 aaPredicted RBP14□□□□□ -0.17
TPM3-211ENST00000368531 SLC25A41Q8N5S1 370 aa14□□□□□ -0.17
TPM3-211ENST00000368531 ZBTB44Q8NCP5 570 aa14□□□□□ -0.17
TPM3-211ENST00000368531 LPCAT1Q8NF37 534 aa14□□□□□ -0.17
TPM3-211ENST00000368531 ATOH1Q92858 354 aaPredicted RBP14□□□□□ -0.17
TPM3-211ENST00000368531 ECHDC3Q96DC8 303 aa14□□□□□ -0.17
TPM3-211ENST00000368531 RTP4Q96DX8 246 aa14□□□□□ -0.17
TPM3-211ENST00000368531 IFT43Q96FT9 208 aa14□□□□□ -0.17
TPM3-211ENST00000368531 SMIM14Q96QK8 99 aa14□□□□□ -0.17
TPM3-211ENST00000368531 GORASP1Q9BQQ3 440 aa14□□□□□ -0.17
TPM3-211ENST00000368531 MLPHQ9BV36 600 aaPredicted RBP14□□□□□ -0.17
TPM3-211ENST00000368531 TDRD1Q9BXT4 1180 aaKnown RBP14□□□□□ -0.17
TPM3-211ENST00000368531 SGK2Q9HBY8 427 aa14□□□□□ -0.17
TPM3-211ENST00000368531 PCDH12Q9NPG4 1184 aa14□□□□□ -0.17
TPM3-211ENST00000368531 FAM86C1Q9NVL1 165 aa14□□□□□ -0.17
TPM3-211ENST00000368531 GGT7Q9UJ14 662 aa14□□□□□ -0.17
TPM3-211ENST00000368531 PCDHGA2Q9Y5H1 932 aa14□□□□□ -0.17
TPM3-211ENST00000368531 FANCMQ8IYD8 2048 aa14□□□□□ -0.17
TPM3-211ENST00000368531 LRRK1Q38SD2 2015 aa13.99□□□□□ -0.17
TPM3-211ENST00000368531 TSPAN11A1L157 253 aa13.99□□□□□ -0.17
TPM3-211ENST00000368531 GOLGA8CPA6NN73 597 aa13.99□□□□□ -0.17
TPM3-211ENST00000368531 CCDC188H7C350 402 aa13.99□□□□□ -0.17
TPM3-211ENST00000368531 ANXA9O76027 345 aa13.99□□□□□ -0.17
TPM3-211ENST00000368531 AGTP01019 485 aa13.99□□□□□ -0.17
TPM3-211ENST00000368531 PRLP01236 227 aa13.99□□□□□ -0.17
TPM3-211ENST00000368531 IGLV3-19P01714 112 aa13.99□□□□□ -0.17
TPM3-211ENST00000368531 C7P10643 843 aa13.99□□□□□ -0.17
TPM3-211ENST00000368531 TNNT3P45378 269 aaPredicted RBP13.99□□□□□ -0.17
TPM3-211ENST00000368531 LMAN1P49257 510 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms