RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 INAVAQ3KP66 663 aa16.89■□□□□ 0.29
PDLIM7-201ENST00000355572 TMEM52BQ4KMG9 183 aa16.89■□□□□ 0.29
PDLIM7-201ENST00000355572 CCDC122Q5T0U0 273 aa16.89■□□□□ 0.29
PDLIM7-201ENST00000355572 SRLQ86TD4 932 aa16.89■□□□□ 0.29
PDLIM7-201ENST00000355572 PROSER1Q86XN7 944 aa16.89■□□□□ 0.29
PDLIM7-201ENST00000355572 PELI3Q8N2H9 469 aa16.89■□□□□ 0.29
PDLIM7-201ENST00000355572 LRRN4Q8WUT4 740 aa16.89■□□□□ 0.29
PDLIM7-201ENST00000355572 ASB12Q8WXK4 309 aa16.89■□□□□ 0.29
PDLIM7-201ENST00000355572 TRIM11Q96F44 468 aa16.89■□□□□ 0.29
PDLIM7-201ENST00000355572 MRPL47Q9HD33 250 aaKnown RBP16.89■□□□□ 0.29
PDLIM7-201ENST00000355572 IPO11Q9UI26 975 aaKnown RBP16.89■□□□□ 0.29
PDLIM7-201ENST00000355572 LUC7L2Q9Y383 392 aaKnown RBP16.89■□□□□ 0.29
PDLIM7-201ENST00000355572 DMXL2Q8TDJ6 3036 aa16.89■□□□□ 0.29
PDLIM7-201ENST00000355572 TMEM8BA6NDV4 472 aa16.88■□□□□ 0.29
PDLIM7-201ENST00000355572 TRABD2BA6NFA1 517 aa16.88■□□□□ 0.29
PDLIM7-201ENST00000355572 EIF3CLB5ME19 914 aaKnown RBP16.88■□□□□ 0.29
PDLIM7-201ENST00000355572 TRAFD1O14545 582 aaPredicted RBP16.88■□□□□ 0.29
PDLIM7-201ENST00000355572 RIOK3O14730 519 aaKnown RBP16.88■□□□□ 0.29
PDLIM7-201ENST00000355572 PALMO75781 387 aa16.88■□□□□ 0.29
PDLIM7-201ENST00000355572 CELA2BP08218 269 aaPredicted RBP16.88■□□□□ 0.29
PDLIM7-201ENST00000355572 TPM4P67936 248 aa16.88■□□□□ 0.29
PDLIM7-201ENST00000355572 IL10RBQ08334 325 aa16.88■□□□□ 0.29
PDLIM7-201ENST00000355572 UGP2Q16851 508 aa16.88■□□□□ 0.29
PDLIM7-201ENST00000355572 PSTKQ8IV42 348 aaKnown RBP16.88■□□□□ 0.29
PDLIM7-201ENST00000355572 RNF214Q8ND24 703 aa16.88■□□□□ 0.29
PDLIM7-201ENST00000355572 OR4C6Q8NH72 309 aa16.88■□□□□ 0.29
PDLIM7-201ENST00000355572 ECHDC3Q96DC8 303 aa16.88■□□□□ 0.29
PDLIM7-201ENST00000355572 EIF3CQ99613 913 aaKnown RBP16.88■□□□□ 0.29
PDLIM7-201ENST00000355572 CHP1Q99653 195 aa16.88■□□□□ 0.29
PDLIM7-201ENST00000355572 NCAPGQ9BPX3 1015 aa16.88■□□□□ 0.29
PDLIM7-201ENST00000355572 SP110Q9HB58 689 aa16.88■□□□□ 0.29
PDLIM7-201ENST00000355572 BZW2Q9Y6E2 419 aaKnown RBP16.88■□□□□ 0.29
PDLIM7-201ENST00000355572 FREM2Q5SZK8 3169 aa16.88■□□□□ 0.29
PDLIM7-201ENST00000355572 KIF26BQ2KJY2 2108 aa16.88■□□□□ 0.29
PDLIM7-201ENST00000355572 KNTC1P50748 2209 aa16.87■□□□□ 0.29
PDLIM7-201ENST00000355572 MAFKO60675 156 aa16.87■□□□□ 0.29
PDLIM7-201ENST00000355572 GCATO75600 419 aa16.87■□□□□ 0.29
PDLIM7-201ENST00000355572 TM7SF2O76062 418 aa16.87■□□□□ 0.29
PDLIM7-201ENST00000355572 MAP3K6O95382 1288 aa16.87■□□□□ 0.29
PDLIM7-201ENST00000355572 CSF2P04141 144 aa16.87■□□□□ 0.29
PDLIM7-201ENST00000355572 C6P13671 934 aa16.87■□□□□ 0.29
PDLIM7-201ENST00000355572 NME1P15531 152 aaKnown RBP16.87■□□□□ 0.29
PDLIM7-201ENST00000355572 CKMT2P17540 419 aa16.87■□□□□ 0.29
PDLIM7-201ENST00000355572 CR2P20023 1033 aa16.87■□□□□ 0.29
PDLIM7-201ENST00000355572 MMP12P39900 470 aa16.87■□□□□ 0.29
PDLIM7-201ENST00000355572 SGCGQ13326 291 aa16.87■□□□□ 0.29
PDLIM7-201ENST00000355572 PIGHQ14442 188 aaPredicted RBP16.87■□□□□ 0.29
PDLIM7-201ENST00000355572 WSCD2Q2TBF2 565 aa16.87■□□□□ 0.29
PDLIM7-201ENST00000355572 HES3Q5TGS1 186 aa16.87■□□□□ 0.29
PDLIM7-201ENST00000355572 PLA2G15Q8NCC3 412 aa16.87■□□□□ 0.29
PDLIM7-201ENST00000355572 DENND6BQ8NEG7 585 aa16.87■□□□□ 0.29
PDLIM7-201ENST00000355572 ZNF548Q8NEK5 533 aaPredicted RBP16.87■□□□□ 0.29
PDLIM7-201ENST00000355572 FAM71BQ8TC56 605 aa16.87■□□□□ 0.29
PDLIM7-201ENST00000355572 APOLD1Q96LR9 279 aa16.87■□□□□ 0.29
PDLIM7-201ENST00000355572 SMIM14Q96QK8 99 aa16.87■□□□□ 0.29
PDLIM7-201ENST00000355572 PCDHGA1Q9Y5H4 931 aa16.87■□□□□ 0.29
PDLIM7-201ENST00000355572 A0A0U1RQS6 177 aa16.86■□□□□ 0.29
PDLIM7-201ENST00000355572 A8MX80 341 aa16.86■□□□□ 0.29
PDLIM7-201ENST00000355572 H3BRJ5 948 aa16.86■□□□□ 0.29
PDLIM7-201ENST00000355572 K7ESM1 405 aa16.86■□□□□ 0.29
PDLIM7-201ENST00000355572 FPGTO14772 594 aa16.86■□□□□ 0.29
PDLIM7-201ENST00000355572 SCAMP1O15126 338 aa16.86■□□□□ 0.29
PDLIM7-201ENST00000355572 MFSD11O43934 449 aa16.86■□□□□ 0.29
PDLIM7-201ENST00000355572 DESP17661 470 aa16.86■□□□□ 0.29
PDLIM7-201ENST00000355572 ACP1P24666 158 aa16.86■□□□□ 0.29
PDLIM7-201ENST00000355572 GJC1P36383 396 aa16.86■□□□□ 0.29
PDLIM7-201ENST00000355572 RABIFP47224 123 aa16.86■□□□□ 0.29
PDLIM7-201ENST00000355572 CSNK1DP48730 415 aa16.86■□□□□ 0.29
PDLIM7-201ENST00000355572 MAXP61244 160 aa16.86■□□□□ 0.29
PDLIM7-201ENST00000355572 INSM1Q01101 510 aaPredicted RBP16.86■□□□□ 0.29
PDLIM7-201ENST00000355572 RAD51Q06609 339 aa16.86■□□□□ 0.29
PDLIM7-201ENST00000355572 ZNF211Q13398 564 aaPredicted RBP16.86■□□□□ 0.29
PDLIM7-201ENST00000355572 C1orf61Q13536 156 aa16.86■□□□□ 0.29
PDLIM7-201ENST00000355572 LBRQ14739 615 aaKnown RBP16.86■□□□□ 0.29
PDLIM7-201ENST00000355572 ACAP1Q15027 740 aa16.86■□□□□ 0.29
PDLIM7-201ENST00000355572 TCEA2Q15560 299 aa16.86■□□□□ 0.29
PDLIM7-201ENST00000355572 PARGQ86W56 976 aa16.86■□□□□ 0.29
PDLIM7-201ENST00000355572 ZNF564Q8TBZ8 553 aaPredicted RBP16.86■□□□□ 0.29
PDLIM7-201ENST00000355572 CXorf40AQ8TE69 158 aa16.86■□□□□ 0.29
PDLIM7-201ENST00000355572 DNAJC7Q99615 494 aa16.86■□□□□ 0.29
PDLIM7-201ENST00000355572 CINPQ9BW66 212 aaPredicted RBP16.86■□□□□ 0.29
PDLIM7-201ENST00000355572 CLPBQ9H078 707 aa16.86■□□□□ 0.29
PDLIM7-201ENST00000355572 IP6K2Q9UHH9 426 aa16.86■□□□□ 0.29
PDLIM7-201ENST00000355572 APC2O95996 2303 aa16.86■□□□□ 0.29
PDLIM7-201ENST00000355572 CELSR3Q9NYQ7 3312 aa16.85■□□□□ 0.29
PDLIM7-201ENST00000355572 LIG3P49916 1009 aa16.85■□□□□ 0.29
PDLIM7-201ENST00000355572 SCNN1BP51168 640 aa16.85■□□□□ 0.29
PDLIM7-201ENST00000355572 CDH6P55285 790 aa16.85■□□□□ 0.29
PDLIM7-201ENST00000355572 CYP4F3Q08477 520 aa16.85■□□□□ 0.29
PDLIM7-201ENST00000355572 DPYSL3Q14195 570 aa16.85■□□□□ 0.29
PDLIM7-201ENST00000355572 DEFB133Q30KQ1 61 aa16.85■□□□□ 0.29
PDLIM7-201ENST00000355572 BOLA3Q53S33 107 aa16.85■□□□□ 0.29
PDLIM7-201ENST00000355572 VSTM4Q8IW00 320 aa16.85■□□□□ 0.29
PDLIM7-201ENST00000355572 PCDH19Q8TAB3 1148 aa16.85■□□□□ 0.29
PDLIM7-201ENST00000355572 TEKT4Q8WW24 435 aa16.85■□□□□ 0.29
PDLIM7-201ENST00000355572 IFT43Q96FT9 208 aa16.85■□□□□ 0.29
PDLIM7-201ENST00000355572 PSKH2Q96QS6 385 aa16.85■□□□□ 0.29
PDLIM7-201ENST00000355572 LRRC61Q9BV99 259 aa16.85■□□□□ 0.29
PDLIM7-201ENST00000355572 ATP8A1Q9Y2Q0 1164 aa16.85■□□□□ 0.29
PDLIM7-201ENST00000355572 PCDHGC4Q9Y5F7 938 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms