RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 MTMR12Q9C0I1 747 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 ALDH8A1Q9H2A2 487 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 CNOT8Q9UFF9 292 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 AFF2P51816 1311 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 A0A087X0B3 334 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 A0A0G2JMP0 313 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 ANKDD1BA6NHY2 528 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 MED24O75448 989 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 GATBO75879 557 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 SRCP12931 536 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 HPGDP15428 266 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 ENDOUP21128 410 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 EIF4BP23588 611 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 AGTR1P30556 359 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 DCXRQ7Z4W1 244 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 DHFR2Q86XF0 187 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 MFSD2AQ8NA29 543 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 OR4M2Q8NGB6 313 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 DNAJA4Q8WW22 397 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 MALSU1Q96EH3 234 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 PUS3Q9BZE2 481 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 VCX2Q9H322 139 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 LYARQ9NX58 379 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 ADD3Q9UEY8 706 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 CDH9Q9ULB4 789 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 PCDHGB7Q9Y5F8 929 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 RNF215Q9Y6U7 377 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 AOX1Q06278 1338 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 VWA3AA6NCI4 1184 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 TCN1P20061 433 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 PKLRP30613 574 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 HSD17B3P37058 310 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 MGAT5Q09328 741 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 NFX1Q12986 1120 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 CDAN1Q8IWY9 1227 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 PARP8Q8N3A8 854 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 ALLCQ8N6M5 410 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 CEP76Q8TAP6 659 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 TMEM184CQ9NVA4 438 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 ACTR10Q9NZ32 417 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 GRHL1Q9NZI5 618 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 VPS28Q9UK41 221 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 PTBP2Q9UKA9 531 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 NOVA2Q9UNW9 492 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 COL17A1Q9UMD9 1497 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 KELP23276 732 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 HOXC9P31274 260 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 NUDT1P36639 197 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 EPHB1P54762 984 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 TLE3Q04726 772 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 DOC2AQ14183 400 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZNF845Q96IR2 970 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 LMAN2LQ9H0V9 348 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 KBTBD4Q9NVX7 518 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 SRRDQ9UH36 339 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 HTR3EA5X5Y0 456 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 PRORSD1PA6NEY8 169 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 MIF4GDA9UHW6 222 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 NEDD8-MDP1E9PL57 170 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 TRIM38O00635 465 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 RARGP13631 454 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 ITPKAP23677 461 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 SLC1A6P48664 564 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 SLC12A3P55017 1021 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 MAGOHP61326 146 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 PPARDQ03181 441 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 TNK2Q07912 1038 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 SMARCB1Q12824 385 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 LCP2Q13094 533 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 VPS72Q15906 364 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 RC3H1Q5TC82 1133 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 CNKSR3Q6P9H4 555 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 BRINP3Q76B58 766 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 CLVS1Q8IUQ0 354 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 NAXEQ8NCW5 288 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 MAGOHBQ96A72 148 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 C9orf72Q96LT7 481 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 PRICKLE1Q96MT3 831 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 TREM1Q9NP99 234 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 TMEM9Q9P0T7 183 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 RBM7Q9Y580 266 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 H7C1D1 291 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 SH2B2O14492 632 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZNF207O43670 478 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 F10P00742 488 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 IFNA21P01568 189 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 PHKG2P15735 406 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 PTPN4P29074 926 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 IFNGR2P38484 337 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 BMXP51813 675 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 IL24Q13007 206 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 PTGR1Q14914 329 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 TPRA1Q86W33 373 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 EFHBQ8N7U6 833 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 PCSK9Q8NBP7 692 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 JARID2Q92833 1246 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 GFM1Q96RP9 751 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 TRIM2Q9C040 744 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 RGCCQ9H4X1 137 aa6.1□□□□□ -1.43
CDC42BPA-201ENST00000334218 GSKIPQ9P0R6 139 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms