RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 CATSPERZQ9NTU4 200 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 SPG21Q9NZD8 308 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 GGA2Q9UJY4 613 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 OVOS2A0A0G2JMS6 1433 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 OVOS2A0A0J9YW53 1432 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 OVOS2Q6IE36 1432 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 DCDC2CA8MYV0 355 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 ECDO95905 644 aaPredicted RBP7.95□□□□□ -1.14
CIITA-201ENST00000324288 CNTFP26441 200 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 CCNFP41002 786 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 ZNF280DQ6N043 979 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 ZNF655Q8N720 491 aaPredicted RBP7.95□□□□□ -1.14
CIITA-201ENST00000324288 ZBTB8BQ8NAP8 495 aaPredicted RBP7.95□□□□□ -1.14
CIITA-201ENST00000324288 KLQ9UEF7 1012 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 ADRA2BP18089 450 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 UGT2B15P54855 530 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 MARC1Q5VT66 337 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 GSTCDQ8NEC7 633 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 TRPV3Q8NET8 790 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 SLC25A23Q9BV35 468 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 OR10H1Q9Y4A9 318 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 GPSM3Q9Y4H4 160 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 A0A0B4J269 797 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 ANKDD1BA6NHY2 528 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 BDNFP23560 247 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 NTSP30990 170 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 SLC5A3P53794 718 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 SNAP47Q5SQN1 464 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 SLC9A4Q6AI14 798 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 DAW1Q8N136 415 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 TRPM1Q7Z4N2 1603 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 ZNF432O94892 652 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 GLRA2P23416 452 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 CD86P42081 329 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 MARCKSL1P49006 195 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 DEFA5Q01523 94 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 MC1RQ01726 317 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 CAMK1Q14012 370 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 AGMOQ6ZNB7 445 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 C1QTNF1Q9BXJ1 281 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 NYAP2Q9P242 653 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 TSPAN16Q9UKR8 245 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 CHD1O14646 1710 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 GMFBP60983 142 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 AUHQ13825 339 aaKnown RBP7.95□□□□□ -1.14
CIITA-201ENST00000324288 PPM1MQ96MI6 270 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 POLEQ07864 2286 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 MAP2K7O14733 419 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 FBXO21O94952 628 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 SERPINF2P08697 491 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 HNRNPLP14866 589 aaKnown RBP eCLIP7.95□□□□□ -1.14
CIITA-201ENST00000324288 ABL2P42684 1182 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 CNPY1Q3B7I2 92 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 KYAT3Q6YP21 454 aaKnown RBP7.95□□□□□ -1.14
CIITA-201ENST00000324288 GPR65Q8IYL9 337 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 GHDCQ8N2G8 530 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 SPERTQ8NA61 448 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 FAM47BQ8NA70 645 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 RIT2Q99578 217 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 MYOCQ99972 504 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 ABCA7Q8IZY2 2146 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 VIL1P09327 827 aaKnown RBP7.95□□□□□ -1.14
CIITA-201ENST00000324288 HNMTP50135 292 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 MXD1Q05195 221 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 FAM187BQ17R55 369 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 TOR1AIP1Q5JTV8 583 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 PPP1R15BQ5SWA1 713 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 DGCR14Q96DF8 476 aaKnown RBP7.95□□□□□ -1.14
CIITA-201ENST00000324288 CPNE1Q99829 537 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 AGO4Q9HCK5 861 aaKnown RBP7.95□□□□□ -1.14
CIITA-201ENST00000324288 MORF4L1Q9UBU8 362 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 A0A075B6Q4 140 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 SLC28A2O43868 658 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 OR10H2O60403 315 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 PRKAR2AP13861 404 aaKnown RBP7.95□□□□□ -1.14
CIITA-201ENST00000324288 AP2S1P53680 142 aaPredicted RBP7.95□□□□□ -1.14
CIITA-201ENST00000324288 PLA2G4EQ3MJ16 856 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 AHSA2Q719I0 299 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 C10orf107Q8IVU9 208 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 ZNF433Q8N7K0 673 aaPredicted RBP7.95□□□□□ -1.14
CIITA-201ENST00000324288 CYP2W1Q8TAV3 490 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 MFSD1Q9H3U5 465 aa7.95□□□□□ -1.14
CIITA-201ENST00000324288 TRIM38O00635 465 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 CAPGP40121 348 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 IL2P60568 153 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 COLEC12Q5KU26 742 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 POMZP3Q6PJE2 187 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 PLEKHH3Q7Z736 793 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 KCTD4Q8WVF5 259 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 SLC9A6Q92581 669 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 OMDQ99983 421 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 CHST7Q9NS84 486 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 BLOC1S4Q9NUP1 217 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 SAE1Q9UBE0 346 aaPredicted RBP7.94□□□□□ -1.14
CIITA-201ENST00000324288 C9JVG2 144 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 PIRTP0C851 137 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 GTF2A2P52657 109 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 CDH8P55286 799 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 SMARCB1Q12824 385 aa7.94□□□□□ -1.14
CIITA-201ENST00000324288 GRIK4Q16099 956 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms