RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 TERF1P54274 439 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 RPL26P61254 145 aaKnown RBP14.16□□□□□ -0.14
SEC61B-201ENST00000223641 VSNL1P62760 191 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 SARNPP82979 210 aaKnown RBP14.16□□□□□ -0.14
SEC61B-201ENST00000223641 GAS6Q14393 721 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 SPARCL1Q14515 664 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 ELF2Q15723 593 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 SLC1A5Q15758 541 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 PCSK7Q16549 785 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 ARSIQ5FYB1 569 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 EOGTQ5NDL2 527 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 PKN3Q6P5Z2 889 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 PPP1R21Q6ZMI0 780 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 RYBPQ8N488 228 aaPredicted RBP14.16□□□□□ -0.14
SEC61B-201ENST00000223641 ZCCHC9Q8N567 271 aaKnown RBP14.16□□□□□ -0.14
SEC61B-201ENST00000223641 PJA1Q8NG27 643 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 PIH1D2Q8WWB5 315 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 IFT81Q8WYA0 676 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 UHRF1Q96T88 793 aaPredicted RBP14.16□□□□□ -0.14
SEC61B-201ENST00000223641 FOXQ1Q9C009 403 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 ZDHHC6Q9H6R6 413 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 TBC1D17Q9HA65 648 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 XAB2Q9HCS7 855 aaKnown RBP14.16□□□□□ -0.14
SEC61B-201ENST00000223641 DKK3Q9UBP4 350 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 SARDHQ9UL12 918 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 RPL26L1Q9UNX3 145 aaKnown RBP14.16□□□□□ -0.14
SEC61B-201ENST00000223641 CHKBQ9Y259 395 aa14.16□□□□□ -0.14
SEC61B-201ENST00000223641 ANKRD66B4E2M5 251 aa14.15□□□□□ -0.14
SEC61B-201ENST00000223641 E7ESA3 106 aa14.15□□□□□ -0.14
SEC61B-201ENST00000223641 AP3B1O00203 1094 aa14.15□□□□□ -0.14
SEC61B-201ENST00000223641 USP12O75317 370 aa14.15□□□□□ -0.14
SEC61B-201ENST00000223641 UGT2B4P06133 528 aa14.15□□□□□ -0.14
SEC61B-201ENST00000223641 HOXB2P14652 356 aa14.15□□□□□ -0.14
SEC61B-201ENST00000223641 COL9A1P20849 921 aa14.15□□□□□ -0.14
SEC61B-201ENST00000223641 CHRNA4P43681 627 aa14.15□□□□□ -0.14
SEC61B-201ENST00000223641 RPS9P46781 194 aaKnown RBP14.15□□□□□ -0.14
SEC61B-201ENST00000223641 LMAN1P49257 510 aa14.15□□□□□ -0.14
SEC61B-201ENST00000223641 CDH17Q12864 832 aa14.15□□□□□ -0.14
SEC61B-201ENST00000223641 UBXN2BQ14CS0 331 aa14.15□□□□□ -0.14
SEC61B-201ENST00000223641 ZNF805Q5CZA5 627 aa14.15□□□□□ -0.14
SEC61B-201ENST00000223641 SIRPB2Q5JXA9 342 aa14.15□□□□□ -0.14
SEC61B-201ENST00000223641 ARMC12Q5T9G4 340 aa14.15□□□□□ -0.14
SEC61B-201ENST00000223641 KIAA1211LQ6NV74 962 aa14.15□□□□□ -0.14
SEC61B-201ENST00000223641 BRAT1Q6PJG6 821 aa14.15□□□□□ -0.14
SEC61B-201ENST00000223641 TMEM92Q6UXU6 159 aa14.15□□□□□ -0.14
SEC61B-201ENST00000223641 Q6ZS52 159 aa14.15□□□□□ -0.14
SEC61B-201ENST00000223641 SYT13Q7L8C5 426 aa14.15□□□□□ -0.14
SEC61B-201ENST00000223641 ZSWIM9Q86XI8 627 aa14.15□□□□□ -0.14
SEC61B-201ENST00000223641 OR52K1Q8NGK4 314 aa14.15□□□□□ -0.14
SEC61B-201ENST00000223641 OR2T3Q8NH03 318 aa14.15□□□□□ -0.14
SEC61B-201ENST00000223641 PIP4K2CQ8TBX8 421 aa14.15□□□□□ -0.14
SEC61B-201ENST00000223641 IFT43Q96FT9 208 aa14.15□□□□□ -0.14
SEC61B-201ENST00000223641 FICDQ9BVA6 458 aa14.15□□□□□ -0.14
SEC61B-201ENST00000223641 FSD1LQ9BXM9 530 aa14.15□□□□□ -0.14
SEC61B-201ENST00000223641 NFU1Q9UMS0 254 aa14.15□□□□□ -0.14
SEC61B-201ENST00000223641 PCDHB9Q9Y5E1 797 aa14.15□□□□□ -0.14
SEC61B-201ENST00000223641 MUC3AQ02505 3323 aa14.15□□□□□ -0.14
SEC61B-201ENST00000223641 GOLGA8MH3BSY2 632 aa14.14□□□□□ -0.15
SEC61B-201ENST00000223641 EIF3HO15372 352 aaKnown RBP eCLIP14.14□□□□□ -0.15
SEC61B-201ENST00000223641 DCXO43602 365 aa14.14□□□□□ -0.15
SEC61B-201ENST00000223641 SYNCRIPO60506 623 aaKnown RBP14.14□□□□□ -0.15
SEC61B-201ENST00000223641 FGF1P05230 155 aa14.14□□□□□ -0.15
SEC61B-201ENST00000223641 ALADP13716 330 aa14.14□□□□□ -0.15
SEC61B-201ENST00000223641 GRIA4P48058 902 aa14.14□□□□□ -0.15
SEC61B-201ENST00000223641 NPY2RP49146 381 aa14.14□□□□□ -0.15
SEC61B-201ENST00000223641 SATB1Q01826 763 aa14.14□□□□□ -0.15
SEC61B-201ENST00000223641 HLTFQ14527 1009 aaKnown RBP eCLIP14.14□□□□□ -0.15
SEC61B-201ENST00000223641 STARD3Q14849 445 aa14.14□□□□□ -0.15
SEC61B-201ENST00000223641 CRY1Q16526 586 aa14.14□□□□□ -0.15
SEC61B-201ENST00000223641 FNBP1LQ5T0N5 605 aa14.14□□□□□ -0.15
SEC61B-201ENST00000223641 DSG4Q86SJ6 1040 aa14.14□□□□□ -0.15
SEC61B-201ENST00000223641 RELL1Q8IUW5 271 aa14.14□□□□□ -0.15
SEC61B-201ENST00000223641 AGGF1Q8N302 714 aaeCLIP14.14□□□□□ -0.15
SEC61B-201ENST00000223641 GRIN3AQ8TCU5 1115 aa14.14□□□□□ -0.15
SEC61B-201ENST00000223641 FAM131CQ96AQ9 280 aa14.14□□□□□ -0.15
SEC61B-201ENST00000223641 SIGLEC10Q96LC7 697 aa14.14□□□□□ -0.15
SEC61B-201ENST00000223641 PWWP2AQ96N64 755 aa14.14□□□□□ -0.15
SEC61B-201ENST00000223641 KLHL32Q96NJ5 620 aa14.14□□□□□ -0.15
SEC61B-201ENST00000223641 FMO2Q99518 471 aa14.14□□□□□ -0.15
SEC61B-201ENST00000223641 APOL2Q9BQE5 337 aa14.14□□□□□ -0.15
SEC61B-201ENST00000223641 ADGRE3Q9BY15 652 aa14.14□□□□□ -0.15
SEC61B-201ENST00000223641 MKRN2Q9H000 416 aaKnown RBP14.14□□□□□ -0.15
SEC61B-201ENST00000223641 TSPYL1Q9H0U9 437 aa14.14□□□□□ -0.15
SEC61B-201ENST00000223641 CHRDQ9H2X0 955 aa14.14□□□□□ -0.15
SEC61B-201ENST00000223641 PHTF1Q9UMS5 762 aa14.14□□□□□ -0.15
SEC61B-201ENST00000223641 MYLKQ15746 1914 aa14.13□□□□□ -0.15
SEC61B-201ENST00000223641 A0A0J9YYE9 177 aa14.13□□□□□ -0.15
SEC61B-201ENST00000223641 ATG13O75143 517 aa14.13□□□□□ -0.15
SEC61B-201ENST00000223641 AVILO75366 819 aa14.13□□□□□ -0.15
SEC61B-201ENST00000223641 TRBC1P01850 177 aa14.13□□□□□ -0.15
SEC61B-201ENST00000223641 ITGB7P26010 798 aa14.13□□□□□ -0.15
SEC61B-201ENST00000223641 ARL4CP56559 192 aa14.13□□□□□ -0.15
SEC61B-201ENST00000223641 RPS14P62263 151 aaKnown RBP14.13□□□□□ -0.15
SEC61B-201ENST00000223641 POLR2LP62875 67 aaKnown RBP14.13□□□□□ -0.15
SEC61B-201ENST00000223641 GALNT3Q14435 633 aa14.13□□□□□ -0.15
SEC61B-201ENST00000223641 CST6Q15828 149 aa14.13□□□□□ -0.15
SEC61B-201ENST00000223641 HIF1AQ16665 826 aa14.13□□□□□ -0.15
SEC61B-201ENST00000223641 QPCTQ16769 361 aa14.13□□□□□ -0.15
SEC61B-201ENST00000223641 MSS51Q4VC12 460 aa14.13□□□□□ -0.15
SEC61B-201ENST00000223641 FAM46CQ5VWP2 391 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms