RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 FKTNO75072 461 aa12.52□□□□□ -0.4
CIITA-212ENST00000618207 MMP2P08253 660 aa12.52□□□□□ -0.4
CIITA-212ENST00000618207 SPATA31D3P0C874 917 aa12.52□□□□□ -0.4
CIITA-212ENST00000618207 NDST2P52849 883 aa12.52□□□□□ -0.4
CIITA-212ENST00000618207 PRAMEP78395 509 aa12.52□□□□□ -0.4
CIITA-212ENST00000618207 DLG1Q12959 904 aa12.52□□□□□ -0.4
CIITA-212ENST00000618207 KPNB1Q14974 876 aaKnown RBP12.52□□□□□ -0.4
CIITA-212ENST00000618207 SPATA31D4Q6ZUB0 917 aa12.52□□□□□ -0.4
CIITA-212ENST00000618207 ANKS3Q6ZW76 656 aa12.52□□□□□ -0.4
CIITA-212ENST00000618207 EFCAB3Q8N7B9 438 aa12.52□□□□□ -0.4
CIITA-212ENST00000618207 SHKBP1Q8TBC3 707 aa12.52□□□□□ -0.4
CIITA-212ENST00000618207 OSBPL1AQ9BXW6 950 aa12.52□□□□□ -0.4
CIITA-212ENST00000618207 COG4Q9H9E3 785 aa12.52□□□□□ -0.4
CIITA-212ENST00000618207 ARL5AQ9Y689 179 aa12.52□□□□□ -0.4
CIITA-212ENST00000618207 ZFP37Q9Y6Q3 630 aaPredicted RBP12.52□□□□□ -0.4
CIITA-212ENST00000618207 CDH23Q9H251 3354 aa12.52□□□□□ -0.4
CIITA-212ENST00000618207 SEC24AO95486 1093 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 IL1BP01584 269 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 CD1EP15812 388 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 PAMP19021 973 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 ATP5C1P36542 298 aaKnown RBP12.52□□□□□ -0.41
CIITA-212ENST00000618207 PGM1P36871 562 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 MAGEA12P43365 314 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 GRIA4P48058 902 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 IDH3AP50213 366 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 SCNN1BP51168 640 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 SGSHP51688 502 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 PLD1Q13393 1074 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 LBRQ14739 615 aaKnown RBP12.52□□□□□ -0.41
CIITA-212ENST00000618207 KHDC1Q4VXA5 237 aaKnown RBP12.52□□□□□ -0.41
CIITA-212ENST00000618207 SLC9B1Q4ZJI4 515 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 SIRPB2Q5JXA9 342 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 SNX30Q5VWJ9 437 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 SH3RF2Q8TEC5 729 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 PDCD6IPQ8WUM4 868 aaKnown RBP12.52□□□□□ -0.41
CIITA-212ENST00000618207 WDR60Q8WVS4 1066 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 IFT43Q96FT9 208 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 LNPEPQ9UIQ6 1025 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 AP3B1O00203 1094 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 DCXO43602 365 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 ZNF189O75820 626 aaPredicted RBP12.52□□□□□ -0.41
CIITA-212ENST00000618207 SBK3P0C264 359 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 PRSS56P0CW18 603 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 PAX7P23759 505 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 GRK2P25098 689 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 HTR7P34969 479 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 CD151P48509 253 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 RAB10P61026 200 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 SLC25A3Q00325 362 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 SLC12A1Q13621 1099 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 CLEC14AQ86T13 490 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 RYBPQ8N488 228 aaPredicted RBP12.52□□□□□ -0.41
CIITA-212ENST00000618207 TDRD5Q8NAT2 981 aaKnown RBP12.52□□□□□ -0.41
CIITA-212ENST00000618207 RAB3IL1Q8TBN0 382 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 EXT2Q93063 718 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 WBP2Q969T9 261 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 TBATAQ96M53 351 aa12.52□□□□□ -0.41
CIITA-212ENST00000618207 OLA1Q9NTK5 396 aaKnown RBP12.52□□□□□ -0.41
CIITA-212ENST00000618207 MARCH4Q9P2E8 410 aaPredicted RBP12.52□□□□□ -0.41
CIITA-212ENST00000618207 CAPN14A8MX76 684 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 SIN3BO75182 1162 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 PEX11AO75192 247 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 PIGNO95427 931 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 CCND1P24385 295 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 EPHA3P29320 983 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 SERINC3Q13530 473 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 PTPRRQ15256 657 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 SPDYAQ5MJ70 313 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 STXBP5Q5T5C0 1151 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 PHTF2Q8N3S3 785 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 OR13C4Q8NGS5 318 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 MARK4Q96L34 752 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 OLFM1Q99784 485 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 CCDC106Q9BWC9 280 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 VN1R3Q9BXE9 311 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 C1QTNF1Q9BXJ1 281 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 NUF2Q9BZD4 464 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 ELAC1Q9H777 363 aaKnown RBP12.51□□□□□ -0.41
CIITA-212ENST00000618207 TREX1Q9NSU2 369 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 ETAA1Q9NY74 926 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 IL37Q9NZH6 218 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 FAM92AA1XBS5 289 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 HEATR9A2RTY3 570 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 C2orf78A6NCI8 922 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 WASH4PA8MWX3 477 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 TMEM233B4DJY2 109 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 SPECC1L-ADORA2AF8WAN1 911 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 H7C4K7 107 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 CBX4O00257 560 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 SERPINA6P08185 405 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 TSPAN8P19075 237 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 PDCD2Q16342 344 aaPredicted RBP12.51□□□□□ -0.41
CIITA-212ENST00000618207 UGP2Q16851 508 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 ARL13AQ5H913 290 aaPredicted RBP12.51□□□□□ -0.41
CIITA-212ENST00000618207 TSTD2Q5T7W7 516 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 NXNQ6DKJ4 435 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 LRRC8EQ6NSJ5 796 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 LINGO4Q6UY18 593 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 PIM3Q86V86 326 aa12.51□□□□□ -0.41
CIITA-212ENST00000618207 OR13J1Q8NGT2 312 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms