RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 SPARCL1Q14515 664 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 PPP1R7Q15435 360 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 USP39Q53GS9 565 aaKnown RBP9.4□□□□□ -0.9
ZNF548-206ENST00000597047 ARMC12Q5T9G4 340 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 DENND2CQ68D51 928 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 TBC1D3GQ6DHY5 549 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 TBC1D3CQ6IPX1 549 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 CCDC70Q6NSX1 233 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 TTC27Q6P3X3 843 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 PRR23BQ6ZRT6 265 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 ARMCX6Q7L4S7 300 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 TBC1D3Q8IZP1 549 aaPredicted RBP9.4□□□□□ -0.9
ZNF548-206ENST00000597047 SLC25A41Q8N5S1 370 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 CAMKK1Q8N5S9 505 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 TMIEQ8NEW7 156 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 LPCAT1Q8NF37 534 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 IPMKQ8NFU5 416 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 ATL2Q8NHH9 583 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 SNX19Q92543 992 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 KLK6Q92876 244 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 RMDN1Q96DB5 314 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 ZNF419Q96HQ0 510 aaPredicted RBP9.4□□□□□ -0.9
ZNF548-206ENST00000597047 PPP1R16AQ96I34 528 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 KRT12Q99456 494 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 APOL2Q9BQE5 337 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 MGME1Q9BQP7 344 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 SLC25A51Q9H1U9 297 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 NEUROG2Q9H2A3 272 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 PABPC3Q9H361 631 aaKnown RBP9.4□□□□□ -0.9
ZNF548-206ENST00000597047 USP29Q9HBJ7 922 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 SERGEFQ9UGK8 458 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 EBF1Q9UH73 591 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 CDC23Q9UJX2 597 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 PPM1HQ9ULR3 514 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 TTC7AQ9ULT0 858 aaPredicted RBP9.4□□□□□ -0.9
ZNF548-206ENST00000597047 PCDHB9Q9Y5E1 797 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 RAI2Q9Y5P3 530 aa9.4□□□□□ -0.9
ZNF548-206ENST00000597047 CKAP5Q14008 2032 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 CACNA1IQ9P0X4 2223 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 KMT2EQ8IZD2 1858 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 ALOX15BO15296 676 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 GALR2O43603 387 aaPredicted RBP9.39□□□□□ -0.91
ZNF548-206ENST00000597047 CPP00450 1065 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 SLC4A1P02730 911 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 ITGAVP06756 1048 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 SP9P0CG40 484 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 C5AR1P21730 350 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 STIP1P31948 543 aaKnown RBP9.39□□□□□ -0.91
ZNF548-206ENST00000597047 CD68P34810 354 aaPredicted RBP9.39□□□□□ -0.91
ZNF548-206ENST00000597047 RPL22P35268 128 aaKnown RBP9.39□□□□□ -0.91
ZNF548-206ENST00000597047 TPMTP51580 245 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 AP1S1P61966 158 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 BASP1P80723 227 aaKnown RBP9.39□□□□□ -0.91
ZNF548-206ENST00000597047 SKOR1P84550 965 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 LMNB2Q03252 620 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 CKAP4Q07065 602 aaKnown RBP9.39□□□□□ -0.91
ZNF548-206ENST00000597047 TRAF2Q12933 501 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 GALNT3Q14435 633 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 PTPRRQ15256 657 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 OASLQ15646 514 aaKnown RBP9.39□□□□□ -0.91
ZNF548-206ENST00000597047 LPAL2Q16609 132 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 ZNF805Q5CZA5 627 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 ERN2Q76MJ5 926 aaKnown RBP9.39□□□□□ -0.91
ZNF548-206ENST00000597047 PARS2Q7L3T8 475 aaKnown RBP9.39□□□□□ -0.91
ZNF548-206ENST00000597047 LONP2Q86WA8 852 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 MAML2Q8IZL2 1156 aaPredicted RBP9.39□□□□□ -0.91
ZNF548-206ENST00000597047 AADATQ8N5Z0 425 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 GLIS1Q8NBF1 620 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 GRK7Q8WTQ7 553 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 NKD2Q969F2 451 aaPredicted RBP9.39□□□□□ -0.91
ZNF548-206ENST00000597047 SPACA7Q96KW9 195 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 NSMCE3Q96MG7 304 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 SPATA13Q96N96 652 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 VAT1Q99536 393 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 HINFPQ9BQA5 517 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 WRAP53Q9BUR4 548 aaKnown RBP9.39□□□□□ -0.91
ZNF548-206ENST00000597047 FICDQ9BVA6 458 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 GPR174Q9BXC1 333 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 OSBPL1AQ9BXW6 950 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 TRIM31Q9BZY9 425 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 FBRSQ9HAH7 460 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 PCDH9Q9HC56 1237 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 ITM2CQ9NQX7 267 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 RAB6BQ9NRW1 208 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 RNF14Q9UBS8 474 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 ITM2BQ9Y287 266 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 DRG1Q9Y295 367 aaKnown RBP9.39□□□□□ -0.91
ZNF548-206ENST00000597047 R4GN57 208 aa9.39□□□□□ -0.91
ZNF548-206ENST00000597047 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.38□□□□□ -0.91
ZNF548-206ENST00000597047 CXorf51AA0A1B0GTR3 108 aa9.38□□□□□ -0.91
ZNF548-206ENST00000597047 C5orf60A6NFR6 353 aa9.38□□□□□ -0.91
ZNF548-206ENST00000597047 USP12O75317 370 aa9.38□□□□□ -0.91
ZNF548-206ENST00000597047 ZNF217O75362 1048 aa9.38□□□□□ -0.91
ZNF548-206ENST00000597047 GCATO75600 419 aa9.38□□□□□ -0.91
ZNF548-206ENST00000597047 RPP40O75818 363 aaKnown RBP9.38□□□□□ -0.91
ZNF548-206ENST00000597047 FSBPO95073 299 aa9.38□□□□□ -0.91
ZNF548-206ENST00000597047 METTL18O95568 372 aa9.38□□□□□ -0.91
ZNF548-206ENST00000597047 ECEL1O95672 775 aa9.38□□□□□ -0.91
ZNF548-206ENST00000597047 MMP2P08253 660 aa9.38□□□□□ -0.91
ZNF548-206ENST00000597047 PDHA1P08559 390 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms