RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 IL1R2P27930 398 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 RABIFP47224 123 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 RGRP47804 291 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 PAPOLAP51003 745 aaKnown RBP10.15□□□□□ -0.78
CMTM3-209ENST00000565003 NDST2P52849 883 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 FANCCQ00597 558 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 CYP4F3Q08477 520 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 SGCGQ13326 291 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 ZNF211Q13398 564 aaPredicted RBP10.15□□□□□ -0.78
CMTM3-209ENST00000565003 PDE1CQ14123 709 aaPredicted RBP10.15□□□□□ -0.78
CMTM3-209ENST00000565003 PPP6R3Q5H9R7 873 aaPredicted RBP10.15□□□□□ -0.78
CMTM3-209ENST00000565003 FIGNQ5HY92 759 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 ARHGAP36Q6ZRI8 547 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 DENND6BQ8NEG7 585 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 FAM174AQ8TBP5 190 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 ASB12Q8WXK4 309 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 CENPTQ96BT3 561 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 IFT43Q96FT9 208 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 EIF3CQ99613 913 aaKnown RBP10.15□□□□□ -0.78
CMTM3-209ENST00000565003 CPEB1Q9BZB8 566 aaKnown RBP10.15□□□□□ -0.78
CMTM3-209ENST00000565003 ISCUQ9H1K1 167 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 DNAJC28Q9NX36 388 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 MYO1AQ9UBC5 1043 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 DKK3Q9UBP4 350 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 DKK4Q9UBT3 224 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 KLF15Q9UIH9 416 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 SCINQ9Y6U3 715 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 DMXL2Q8TDJ6 3036 aa10.15□□□□□ -0.78
CMTM3-209ENST00000565003 CELSR3Q9NYQ7 3312 aa10.15□□□□□ -0.79
CMTM3-209ENST00000565003 ZFYVE26Q68DK2 2539 aa10.14□□□□□ -0.79
CMTM3-209ENST00000565003 ANKRD11Q6UB99 2663 aaPredicted RBP10.14□□□□□ -0.79
CMTM3-209ENST00000565003 LY6G6EA0A0G2JKS1 128 aa10.14□□□□□ -0.79
CMTM3-209ENST00000565003 TSPAN11A1L157 253 aa10.14□□□□□ -0.79
CMTM3-209ENST00000565003 BUB1BO60566 1050 aaPredicted RBP10.14□□□□□ -0.79
CMTM3-209ENST00000565003 NEBLO76041 1014 aa10.14□□□□□ -0.79
CMTM3-209ENST00000565003 CSF2P04141 144 aa10.14□□□□□ -0.79
CMTM3-209ENST00000565003 MYBL1P10243 752 aa10.14□□□□□ -0.79
CMTM3-209ENST00000565003 CDK4P11802 303 aa10.14□□□□□ -0.79
CMTM3-209ENST00000565003 MYF5P13349 255 aa10.14□□□□□ -0.79
CMTM3-209ENST00000565003 JUPP14923 745 aa10.14□□□□□ -0.79
CMTM3-209ENST00000565003 NME1P15531 152 aaKnown RBP10.14□□□□□ -0.79
CMTM3-209ENST00000565003 ACP1P24666 158 aa10.14□□□□□ -0.79
CMTM3-209ENST00000565003 HNF1BP35680 557 aa10.14□□□□□ -0.79
CMTM3-209ENST00000565003 IGFALSP35858 605 aa10.14□□□□□ -0.79
CMTM3-209ENST00000565003 RAD51Q06609 339 aa10.14□□□□□ -0.79
CMTM3-209ENST00000565003 EIF2B5Q13144 721 aaKnown RBP10.14□□□□□ -0.79
CMTM3-209ENST00000565003 ILKQ13418 452 aa10.14□□□□□ -0.79
CMTM3-209ENST00000565003 DPYSQ14117 519 aa10.14□□□□□ -0.79
CMTM3-209ENST00000565003 TDRD12Q587J7 1177 aaKnown RBP10.14□□□□□ -0.79
CMTM3-209ENST00000565003 VPS36Q86VN1 386 aa10.14□□□□□ -0.79
CMTM3-209ENST00000565003 PARGQ86W56 976 aa10.14□□□□□ -0.79
CMTM3-209ENST00000565003 ZSWIM9Q86XI8 627 aa10.14□□□□□ -0.79
CMTM3-209ENST00000565003 DCP2Q8IU60 420 aaKnown RBP10.14□□□□□ -0.79
CMTM3-209ENST00000565003 CAMK1DQ8IU85 385 aa10.14□□□□□ -0.79
CMTM3-209ENST00000565003 PSTKQ8IV42 348 aaKnown RBP10.14□□□□□ -0.79
CMTM3-209ENST00000565003 TP53INP2Q8IXH6 220 aa10.14□□□□□ -0.79
CMTM3-209ENST00000565003 PDCD7Q8N8D1 485 aaKnown RBP10.14□□□□□ -0.79
CMTM3-209ENST00000565003 TP53I13Q8NBR0 393 aaPredicted RBP10.14□□□□□ -0.79
CMTM3-209ENST00000565003 TSEN2Q8NCE0 465 aaKnown RBP10.14□□□□□ -0.79
CMTM3-209ENST00000565003 ZNF548Q8NEK5 533 aaPredicted RBP10.14□□□□□ -0.79
CMTM3-209ENST00000565003 TRIM11Q96F44 468 aa10.14□□□□□ -0.79
CMTM3-209ENST00000565003 NCAPGQ9BPX3 1015 aa10.14□□□□□ -0.79
CMTM3-209ENST00000565003 WRAP53Q9BUR4 548 aaKnown RBP10.14□□□□□ -0.79
CMTM3-209ENST00000565003 SP110Q9HB58 689 aa10.14□□□□□ -0.79
CMTM3-209ENST00000565003 MBNL1Q9NR56 388 aaKnown RBP10.14□□□□□ -0.79
CMTM3-209ENST00000565003 DONSONQ9NYP3 566 aa10.14□□□□□ -0.79
CMTM3-209ENST00000565003 NLGN3Q9NZ94 848 aa10.14□□□□□ -0.79
CMTM3-209ENST00000565003 CWC15Q9P013 229 aaKnown RBP10.14□□□□□ -0.79
CMTM3-209ENST00000565003 PNMA8BQ9ULN7 279 aaPredicted RBP10.14□□□□□ -0.79
CMTM3-209ENST00000565003 RAXQ9Y2V3 346 aa10.14□□□□□ -0.79
CMTM3-209ENST00000565003 COQ6Q9Y2Z9 468 aa10.14□□□□□ -0.79
CMTM3-209ENST00000565003 GPSM3Q9Y4H4 160 aa10.14□□□□□ -0.79
CMTM3-209ENST00000565003 U3KQA8 63 aa10.14□□□□□ -0.79
CMTM3-209ENST00000565003 A0A1W2PQJ5 194 aa10.13□□□□□ -0.79
CMTM3-209ENST00000565003 ARHGAP42A6NI28 874 aa10.13□□□□□ -0.79
CMTM3-209ENST00000565003 H3BM21 787 aa10.13□□□□□ -0.79
CMTM3-209ENST00000565003 K7ESM1 405 aa10.13□□□□□ -0.79
CMTM3-209ENST00000565003 DFFAO00273 331 aa10.13□□□□□ -0.79
CMTM3-209ENST00000565003 SCAMP1O15126 338 aa10.13□□□□□ -0.79
CMTM3-209ENST00000565003 MUSKO15146 869 aa10.13□□□□□ -0.79
CMTM3-209ENST00000565003 DAPK3O43293 454 aa10.13□□□□□ -0.79
CMTM3-209ENST00000565003 TM7SF2O76062 418 aa10.13□□□□□ -0.79
CMTM3-209ENST00000565003 PRKCGP05129 697 aa10.13□□□□□ -0.79
CMTM3-209ENST00000565003 PCK1P35558 622 aa10.13□□□□□ -0.79
CMTM3-209ENST00000565003 UBASH3AP57075 661 aa10.13□□□□□ -0.79
CMTM3-209ENST00000565003 HNRNPKP61978 463 aaKnown RBP eCLIP10.13□□□□□ -0.79
CMTM3-209ENST00000565003 DAB2P98082 770 aa10.13□□□□□ -0.79
CMTM3-209ENST00000565003 INSM1Q01101 510 aaPredicted RBP10.13□□□□□ -0.79
CMTM3-209ENST00000565003 TARDBPQ13148 414 aaKnown RBP eCLIP10.13□□□□□ -0.79
CMTM3-209ENST00000565003 IRF4Q15306 451 aa10.13□□□□□ -0.79
CMTM3-209ENST00000565003 UGP2Q16851 508 aa10.13□□□□□ -0.79
CMTM3-209ENST00000565003 SMTNL2Q2TAL5 461 aa10.13□□□□□ -0.79
CMTM3-209ENST00000565003 TMEM52BQ4KMG9 183 aa10.13□□□□□ -0.79
CMTM3-209ENST00000565003 HS1BP3Q53T59 392 aa10.13□□□□□ -0.79
CMTM3-209ENST00000565003 TXNRD3NBQ6F5E7 133 aa10.13□□□□□ -0.79
CMTM3-209ENST00000565003 RBFAQ8N0V3 343 aa10.13□□□□□ -0.79
CMTM3-209ENST00000565003 CXorf40AQ8TE69 158 aa10.13□□□□□ -0.79
CMTM3-209ENST00000565003 RFFLQ8WZ73 363 aa10.13□□□□□ -0.79
CMTM3-209ENST00000565003 SYN2Q92777 582 aaPredicted RBP10.13□□□□□ -0.79
CMTM3-209ENST00000565003 BTBD6Q96KE9 485 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms