RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 ZSCAN23Q3MJ62 389 aa12.06□□□□□ -0.48
HERC1-202ENST00000558324 HS1BP3Q53T59 392 aa12.06□□□□□ -0.48
HERC1-202ENST00000558324 TPRG1LQ5T0D9 272 aa12.06□□□□□ -0.48
HERC1-202ENST00000558324 PROSER1Q86XN7 944 aa12.06□□□□□ -0.48
HERC1-202ENST00000558324 ARHGAP12Q8IWW6 846 aa12.06□□□□□ -0.48
HERC1-202ENST00000558324 TP53INP2Q8IXH6 220 aa12.06□□□□□ -0.48
HERC1-202ENST00000558324 PAF1Q8N7H5 531 aa12.06□□□□□ -0.48
HERC1-202ENST00000558324 CXorf40AQ8TE69 158 aa12.06□□□□□ -0.48
HERC1-202ENST00000558324 BTBD6Q96KE9 485 aa12.06□□□□□ -0.48
HERC1-202ENST00000558324 KLF6Q99612 283 aaPredicted RBP12.06□□□□□ -0.48
HERC1-202ENST00000558324 EIF3CQ99613 913 aaKnown RBP12.06□□□□□ -0.48
HERC1-202ENST00000558324 CINPQ9BW66 212 aaPredicted RBP12.06□□□□□ -0.48
HERC1-202ENST00000558324 C1QTNF2Q9BXJ5 285 aa12.06□□□□□ -0.48
HERC1-202ENST00000558324 THAP2Q9H0W7 228 aa12.06□□□□□ -0.48
HERC1-202ENST00000558324 ISCUQ9H1K1 167 aa12.06□□□□□ -0.48
HERC1-202ENST00000558324 CWC15Q9P013 229 aaKnown RBP12.06□□□□□ -0.48
HERC1-202ENST00000558324 PCDHGA1Q9Y5H4 931 aa12.06□□□□□ -0.48
HERC1-202ENST00000558324 HS3ST3A1Q9Y663 406 aa12.06□□□□□ -0.48
HERC1-202ENST00000558324 IGF2RP11717 2491 aa12.05□□□□□ -0.48
HERC1-202ENST00000558324 A0A087X0T9 212 aa12.05□□□□□ -0.48
HERC1-202ENST00000558324 H3BRJ5 948 aa12.05□□□□□ -0.48
HERC1-202ENST00000558324 TAF4O00268 1085 aa12.05□□□□□ -0.48
HERC1-202ENST00000558324 PALMO75781 387 aa12.05□□□□□ -0.48
HERC1-202ENST00000558324 NEBLO76041 1014 aa12.05□□□□□ -0.48
HERC1-202ENST00000558324 TM7SF2O76062 418 aa12.05□□□□□ -0.48
HERC1-202ENST00000558324 PRKCGP05129 697 aa12.05□□□□□ -0.48
HERC1-202ENST00000558324 SERPING1P05155 500 aa12.05□□□□□ -0.48
HERC1-202ENST00000558324 FAM228BP0C875 321 aa12.05□□□□□ -0.48
HERC1-202ENST00000558324 MYF5P13349 255 aa12.05□□□□□ -0.48
HERC1-202ENST00000558324 IL1R2P27930 398 aa12.05□□□□□ -0.48
HERC1-202ENST00000558324 IGFALSP35858 605 aa12.05□□□□□ -0.48
HERC1-202ENST00000558324 RABIFP47224 123 aa12.05□□□□□ -0.48
HERC1-202ENST00000558324 ZBED6P86452 979 aa12.05□□□□□ -0.48
HERC1-202ENST00000558324 DPYSQ14117 519 aa12.05□□□□□ -0.48
HERC1-202ENST00000558324 PROX2Q3B8N5 592 aa12.05□□□□□ -0.48
HERC1-202ENST00000558324 HES3Q5TGS1 186 aa12.05□□□□□ -0.48
HERC1-202ENST00000558324 ZSCAN30Q86W11 494 aa12.05□□□□□ -0.48
HERC1-202ENST00000558324 PARGQ86W56 976 aa12.05□□□□□ -0.48
HERC1-202ENST00000558324 CAMK1DQ8IU85 385 aa12.05□□□□□ -0.48
HERC1-202ENST00000558324 TSEN2Q8NCE0 465 aaKnown RBP12.05□□□□□ -0.48
HERC1-202ENST00000558324 TSC1Q92574 1164 aa12.05□□□□□ -0.48
HERC1-202ENST00000558324 GPR27Q9NS67 375 aa12.05□□□□□ -0.48
HERC1-202ENST00000558324 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.05□□□□□ -0.48
HERC1-202ENST00000558324 DKK3Q9UBP4 350 aa12.05□□□□□ -0.48
HERC1-202ENST00000558324 ANAPC7Q9UJX3 599 aa12.05□□□□□ -0.48
HERC1-202ENST00000558324 COQ6Q9Y2Z9 468 aa12.05□□□□□ -0.48
HERC1-202ENST00000558324 BZW2Q9Y6E2 419 aaKnown RBP12.05□□□□□ -0.48
HERC1-202ENST00000558324 PTPRBP23467 1997 aa12.05□□□□□ -0.48
HERC1-202ENST00000558324 SPTY2D1-AS1A0A0U1RR47 76 aa12.04□□□□□ -0.48
HERC1-202ENST00000558324 TRABD2BA6NFA1 517 aa12.04□□□□□ -0.48
HERC1-202ENST00000558324 H3BM21 787 aa12.04□□□□□ -0.48
HERC1-202ENST00000558324 CAPNS1P04632 268 aa12.04□□□□□ -0.48
HERC1-202ENST00000558324 GYPCP04921 128 aa12.04□□□□□ -0.48
HERC1-202ENST00000558324 JUPP14923 745 aa12.04□□□□□ -0.48
HERC1-202ENST00000558324 AMPD1P23109 780 aa12.04□□□□□ -0.48
HERC1-202ENST00000558324 PCK1P35558 622 aa12.04□□□□□ -0.48
HERC1-202ENST00000558324 HNF1BP35680 557 aa12.04□□□□□ -0.48
HERC1-202ENST00000558324 GJC1P36383 396 aa12.04□□□□□ -0.48
HERC1-202ENST00000558324 ARL4AP40617 200 aa12.04□□□□□ -0.48
HERC1-202ENST00000558324 SSR1P43307 286 aaKnown RBP12.04□□□□□ -0.48
HERC1-202ENST00000558324 THOP1P52888 689 aa12.04□□□□□ -0.48
HERC1-202ENST00000558324 PFN3P60673 137 aa12.04□□□□□ -0.48
HERC1-202ENST00000558324 CYP4F3Q08477 520 aa12.04□□□□□ -0.48
HERC1-202ENST00000558324 ZNF211Q13398 564 aaPredicted RBP12.04□□□□□ -0.48
HERC1-202ENST00000558324 AFMIDQ63HM1 303 aa12.04□□□□□ -0.48
HERC1-202ENST00000558324 TXNRD3NBQ6F5E7 133 aa12.04□□□□□ -0.48
HERC1-202ENST00000558324 SRLQ86TD4 932 aa12.04□□□□□ -0.48
HERC1-202ENST00000558324 TMPRSS12Q86WS5 348 aa12.04□□□□□ -0.48
HERC1-202ENST00000558324 DCP2Q8IU60 420 aaKnown RBP12.04□□□□□ -0.48
HERC1-202ENST00000558324 PSTKQ8IV42 348 aaKnown RBP12.04□□□□□ -0.48
HERC1-202ENST00000558324 DENND6BQ8NEG7 585 aa12.04□□□□□ -0.48
HERC1-202ENST00000558324 ZNF548Q8NEK5 533 aaPredicted RBP12.04□□□□□ -0.48
HERC1-202ENST00000558324 OR4C6Q8NH72 309 aa12.04□□□□□ -0.48
HERC1-202ENST00000558324 FAM174AQ8TBP5 190 aa12.04□□□□□ -0.48
HERC1-202ENST00000558324 SYN2Q92777 582 aaPredicted RBP12.04□□□□□ -0.48
HERC1-202ENST00000558324 CENPTQ96BT3 561 aa12.04□□□□□ -0.48
HERC1-202ENST00000558324 LENG8Q96PV6 779 aaPredicted RBP12.04□□□□□ -0.48
HERC1-202ENST00000558324 NUP85Q9BW27 656 aa12.04□□□□□ -0.48
HERC1-202ENST00000558324 CPEB1Q9BZB8 566 aaKnown RBP12.04□□□□□ -0.48
HERC1-202ENST00000558324 XPO4Q9C0E2 1151 aaKnown RBP12.04□□□□□ -0.48
HERC1-202ENST00000558324 SUV39H2Q9H5I1 410 aa12.04□□□□□ -0.48
HERC1-202ENST00000558324 PCDH12Q9NPG4 1184 aa12.04□□□□□ -0.48
HERC1-202ENST00000558324 MBNL1Q9NR56 388 aaKnown RBP12.04□□□□□ -0.48
HERC1-202ENST00000558324 KLF15Q9UIH9 416 aa12.04□□□□□ -0.48
HERC1-202ENST00000558324 CAPN11Q9UMQ6 739 aa12.04□□□□□ -0.48
HERC1-202ENST00000558324 LUC7L2Q9Y383 392 aaKnown RBP12.04□□□□□ -0.48
HERC1-202ENST00000558324 CABIN1Q9Y6J0 2220 aa12.04□□□□□ -0.48
HERC1-202ENST00000558324 PLXNB3Q9ULL4 1909 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 MUSKO15146 869 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 BUB1BO60566 1050 aaPredicted RBP12.03□□□□□ -0.48
HERC1-202ENST00000558324 CSF2P04141 144 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 C1SP09871 688 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 RARAP10276 462 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 ALPPL2P10696 532 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 NME1P15531 152 aaKnown RBP12.03□□□□□ -0.48
HERC1-202ENST00000558324 JUNDP17535 347 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 PTMSP20962 102 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 SERPINA4P29622 427 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 CASP14P31944 242 aa12.03□□□□□ -0.48
HERC1-202ENST00000558324 HNRNPKP61978 463 aaKnown RBP eCLIP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms