RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 TUBB3Q13509 450 aa14.14□□□□□ -0.15
RAB3IP-216ENST00000552199 SPOUT1Q5T280 376 aaKnown RBP14.14□□□□□ -0.15
RAB3IP-216ENST00000552199 ZYG11AQ6WRX3 759 aa14.14□□□□□ -0.15
RAB3IP-216ENST00000552199 DENND1CQ8IV53 801 aa14.14□□□□□ -0.15
RAB3IP-216ENST00000552199 CENPLQ8N0S6 344 aaPredicted RBP14.14□□□□□ -0.15
RAB3IP-216ENST00000552199 OR7D4Q8NG98 312 aa14.14□□□□□ -0.15
RAB3IP-216ENST00000552199 OR13J1Q8NGT2 312 aa14.14□□□□□ -0.15
RAB3IP-216ENST00000552199 ELMO2Q96JJ3 720 aa14.14□□□□□ -0.15
RAB3IP-216ENST00000552199 MIPEPQ99797 713 aa14.14□□□□□ -0.15
RAB3IP-216ENST00000552199 CYP4F11Q9HBI6 524 aa14.14□□□□□ -0.15
RAB3IP-216ENST00000552199 DNAJC28Q9NX36 388 aa14.14□□□□□ -0.15
RAB3IP-216ENST00000552199 CPSF2Q9P2I0 782 aaKnown RBP14.14□□□□□ -0.15
RAB3IP-216ENST00000552199 TBX21Q9UL17 535 aa14.14□□□□□ -0.15
RAB3IP-216ENST00000552199 ZNF195O14628 629 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 SLC7A4O43246 635 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 GJB3O75712 270 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 WFS1O76024 890 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 STC2O76061 302 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 EPOP01588 193 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 KLKB1P03952 638 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 SLC8A1P32418 973 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 ALDH1A3P47895 512 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 LEPRP48357 1165 aaKnown RBP14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 PRKAA2P54646 552 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 TAS2R39P59534 338 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 POU4F1Q01851 419 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 BTG3Q14201 252 aaPredicted RBP14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 ALG1LQ6GMV1 187 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 CNSTQ6PJW8 725 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 MAVSQ7Z434 540 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 TREML1Q86YW5 311 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 FAM13CQ8NE31 585 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 OR52K2Q8NGK3 314 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 STYXQ8WUJ0 223 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 IFT43Q96FT9 208 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 TRMT2BQ96GJ1 504 aaKnown RBP14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 FEM1CQ96JP0 617 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 SCYL1Q96KG9 808 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 GPR78Q96P69 363 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 CCDC106Q9BWC9 280 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 GATA5Q9BWX5 397 aaPredicted RBP14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 CADM1Q9BY67 442 aaKnown RBP14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 GKN1Q9NS71 199 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 YIPF1Q9Y548 306 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 A0A087X1B8 175 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 TARM1B6A8C7 271 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 TK2O00142 265 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 AURKAO14965 403 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 CLDN11O75508 207 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 KLHL2O95198 593 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 HSPA4LO95757 839 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 HLA-DPA1P20036 260 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 CORO1AP31146 461 aaKnown RBP14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 IDH3AP50213 366 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 ALDH18A1P54886 795 aaKnown RBP14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 RPS24P62847 133 aaKnown RBP14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 ZNF460Q14592 562 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 TBCCQ15814 346 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 C1orf53Q5VUE5 145 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 IL31Q6EBC2 164 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 LRRC8EQ6NSJ5 796 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 RINLQ6ZS11 566 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 GALNT7Q86SF2 657 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 SLC39A11Q8N1S5 342 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 BBS5Q8N3I7 341 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 FSTL5Q8N475 847 aaPredicted RBP14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 GPATCH11Q8N954 259 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 TOP1MTQ969P6 601 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 NXNL1Q96CM4 212 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 ZNF689Q96CS4 500 aaPredicted RBP14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 PRICKLE1Q96MT3 831 aaPredicted RBP14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 ZNF558Q96NG5 402 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 OMDQ99983 421 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 HERC2P3Q9BVR0 1158 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 KLF16Q9BXK1 252 aaPredicted RBP14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 RNF38Q9H0F5 515 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 MFSD1Q9H3U5 465 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 SORCS3Q9UPU3 1222 aa14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 APOBEC2Q9Y235 224 aaKnown RBP14.13□□□□□ -0.15
RAB3IP-216ENST00000552199 ANAPC1Q9H1A4 1944 aa14.12□□□□□ -0.15
RAB3IP-216ENST00000552199 GYG2O15488 501 aa14.12□□□□□ -0.15
RAB3IP-216ENST00000552199 GSC2O15499 205 aa14.12□□□□□ -0.15
RAB3IP-216ENST00000552199 LDB2O43679 373 aa14.12□□□□□ -0.15
RAB3IP-216ENST00000552199 KDELR3O43731 214 aa14.12□□□□□ -0.15
RAB3IP-216ENST00000552199 FGF1P05230 155 aa14.12□□□□□ -0.15
RAB3IP-216ENST00000552199 GLRBP48167 497 aa14.12□□□□□ -0.15
RAB3IP-216ENST00000552199 NUMBP49757 651 aa14.12□□□□□ -0.15
RAB3IP-216ENST00000552199 CLCN5P51795 746 aa14.12□□□□□ -0.15
RAB3IP-216ENST00000552199 SLC12A2P55011 1212 aa14.12□□□□□ -0.15
RAB3IP-216ENST00000552199 DLG1Q12959 904 aa14.12□□□□□ -0.15
RAB3IP-216ENST00000552199 PLD1Q13393 1074 aa14.12□□□□□ -0.15
RAB3IP-216ENST00000552199 LAMB3Q13751 1172 aa14.12□□□□□ -0.15
RAB3IP-216ENST00000552199 TAF12Q16514 161 aa14.12□□□□□ -0.15
RAB3IP-216ENST00000552199 TSNAXIP1Q2TAA8 658 aa14.12□□□□□ -0.15
RAB3IP-216ENST00000552199 ZNF789Q5FWF6 425 aa14.12□□□□□ -0.15
RAB3IP-216ENST00000552199 LIPMQ5VYY2 423 aa14.12□□□□□ -0.15
RAB3IP-216ENST00000552199 AGAP11Q8TF27 550 aa14.12□□□□□ -0.15
RAB3IP-216ENST00000552199 HDAC10Q969S8 669 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms