RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 A0A0B4J269 797 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 USP27XA6NNY8 438 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 TISP43B9A030 160 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 E9PMD0 336 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 EBAG9O00559 213 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 GABRDO14764 452 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 WNT9AO14904 365 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 VILLO15195 856 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 PFKFB2O60825 505 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 CTDNEP1O95476 244 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 MT-CO3P00414 261 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 PIGRP01833 764 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 CCDC175P0C221 793 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 TYRP14679 529 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 ACO1P21399 889 aaKnown RBP6.89□□□□□ -1.31
CCDC60-205ENST00000546345 MUTP22033 750 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 CMA1P23946 247 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 ACP1P24666 158 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 TACR1P25103 407 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 CD27P26842 260 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 OXTRP30559 389 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 PGFP49763 221 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 NCKAP1LP55160 1127 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 NOP14P78316 857 aaKnown RBP6.89□□□□□ -1.31
CCDC60-205ENST00000546345 MYL5Q02045 173 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 APBA1Q02410 837 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 ST3GAL1Q11201 340 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 TAF10Q12962 218 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 KCNAB2Q13303 367 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 TRIM14Q14142 442 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 CAMK4Q16566 473 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 GEN1Q17RS7 908 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 BEND6Q5SZJ8 279 aaPredicted RBP6.89□□□□□ -1.31
CCDC60-205ENST00000546345 BTBD8Q5XKL5 378 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 BICRALQ6AI39 1079 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 DENND5AQ6IQ26 1287 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 OGFOD2Q6N063 350 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 CCDC70Q6NSX1 233 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 RINT1Q6NUQ1 792 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 ZNF662Q6ZS27 426 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 DENND5BQ6ZUT9 1274 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 DDX42Q86XP3 938 aaKnown RBP eCLIP6.89□□□□□ -1.31
CCDC60-205ENST00000546345 VSTM4Q8IW00 320 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 SCUBE1Q8IWY4 988 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 FBXO15Q8NCQ5 510 aaPredicted RBP6.89□□□□□ -1.31
CCDC60-205ENST00000546345 C1orf131Q8NDD1 294 aaKnown RBP6.89□□□□□ -1.31
CCDC60-205ENST00000546345 NEK11Q8NG66 645 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 SCFD1Q8WVM8 642 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 KBTBD7Q8WVZ9 684 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 P3H4Q92791 437 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 SIPA1Q96FS4 1042 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 ZNF274Q96GC6 653 aaPredicted RBP6.89□□□□□ -1.31
CCDC60-205ENST00000546345 C1orf159Q96HA4 380 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 PRR11Q96HE9 360 aaPredicted RBP6.89□□□□□ -1.31
CCDC60-205ENST00000546345 TSPAN18Q96SJ8 248 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 NUP58Q9BVL2 599 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 PARD6BQ9BYG5 372 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 CAAP1Q9H8G2 361 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 TNFRSF12AQ9NP84 129 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 DPP3Q9NY33 737 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 THAP10Q9P2Z0 257 aaPredicted RBP6.89□□□□□ -1.31
CCDC60-205ENST00000546345 C2CD2Q9Y426 696 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 PCDHB6Q9Y5E3 794 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 PTPRJQ12913 1337 aa6.89□□□□□ -1.31
CCDC60-205ENST00000546345 A0A1W2PR77 199 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 CDRT15L2A8MXV6 281 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 F8VP50 259 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 PES1O00541 588 aaKnown RBP6.88□□□□□ -1.31
CCDC60-205ENST00000546345 CPLX1O14810 134 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 POLR3GO15318 223 aaPredicted RBP6.88□□□□□ -1.31
CCDC60-205ENST00000546345 KIF5CO60282 957 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 PPP6R2O75170 966 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 SEMA4FO95754 770 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 FAM153BP0C7A2 387 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 IRF1P10914 325 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 FDPSP14324 419 aaKnown RBP6.88□□□□□ -1.31
CCDC60-205ENST00000546345 CKMT2P17540 419 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 BDNFP23560 247 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 MCM7P33993 719 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 KRT2P35908 639 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 CCT6AP40227 531 aaKnown RBP6.88□□□□□ -1.31
CCDC60-205ENST00000546345 MATR3P43243 847 aaKnown RBP eCLIP6.88□□□□□ -1.31
CCDC60-205ENST00000546345 LSSP48449 732 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 RPL11P62913 178 aaKnown RBP6.88□□□□□ -1.31
CCDC60-205ENST00000546345 GRIN1Q05586 938 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 STRN3Q13033 797 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 STK3Q13188 491 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 ZNF234Q14588 700 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 STARD3Q14849 445 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 TESK1Q15569 626 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 ARL13BQ3SXY8 428 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 HAUS3Q68CZ6 603 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 MBLAC2Q68D91 279 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 SDE2Q6IQ49 451 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 VSTM1Q6UX27 236 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 CRELD2Q6UXH1 353 aaPredicted RBP6.88□□□□□ -1.31
CCDC60-205ENST00000546345 USP53Q70EK8 1073 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 TMC6Q7Z403 805 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 LIMS2Q7Z4I7 341 aa6.88□□□□□ -1.31
CCDC60-205ENST00000546345 SPATA2LQ8IUW3 424 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms