RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 C6orf52Q5T4I8 152 aa8.73□□□□□ -1.01
SHPRH-208ENST00000520752 RSBN1Q5VWQ0 802 aaPredicted RBP8.73□□□□□ -1.01
SHPRH-208ENST00000520752 INTS5Q6P9B9 1019 aaKnown RBP8.73□□□□□ -1.01
SHPRH-208ENST00000520752 TFAP2DQ7Z6R9 452 aa8.73□□□□□ -1.01
SHPRH-208ENST00000520752 FAM83AQ86UY5 434 aa8.73□□□□□ -1.01
SHPRH-208ENST00000520752 ANKLE2Q86XL3 938 aa8.73□□□□□ -1.01
SHPRH-208ENST00000520752 CAMK1DQ8IU85 385 aa8.73□□□□□ -1.01
SHPRH-208ENST00000520752 ZC3H3Q8IXZ2 948 aaKnown RBP8.73□□□□□ -1.01
SHPRH-208ENST00000520752 TBC1D21Q8IYX1 336 aa8.73□□□□□ -1.01
SHPRH-208ENST00000520752 CELF2-AS1Q8N7Q2 184 aa8.73□□□□□ -1.01
SHPRH-208ENST00000520752 DTWD2Q8NBA8 298 aa8.73□□□□□ -1.01
SHPRH-208ENST00000520752 PIK3C3Q8NEB9 887 aa8.73□□□□□ -1.01
SHPRH-208ENST00000520752 TOP1MTQ969P6 601 aa8.73□□□□□ -1.01
SHPRH-208ENST00000520752 LRRC59Q96AG4 307 aaKnown RBP8.73□□□□□ -1.01
SHPRH-208ENST00000520752 CLPTM1LQ96KA5 538 aa8.73□□□□□ -1.01
SHPRH-208ENST00000520752 ZNF512BQ96KM6 892 aaPredicted RBP8.73□□□□□ -1.01
SHPRH-208ENST00000520752 TRAF4Q9BUZ4 470 aaPredicted RBP8.73□□□□□ -1.01
SHPRH-208ENST00000520752 TEX13BQ9BXU2 312 aa8.73□□□□□ -1.01
SHPRH-208ENST00000520752 WDR6Q9NNW5 1121 aaKnown RBP8.73□□□□□ -1.01
SHPRH-208ENST00000520752 PPP1R14DQ9NXH3 145 aa8.73□□□□□ -1.01
SHPRH-208ENST00000520752 ZC3H7BQ9UGR2 993 aaKnown RBP8.73□□□□□ -1.01
SHPRH-208ENST00000520752 CPSF3Q9UKF6 684 aaKnown RBP8.73□□□□□ -1.01
SHPRH-208ENST00000520752 PCDHB10Q9UN67 800 aa8.73□□□□□ -1.01
SHPRH-208ENST00000520752 MAP3K2Q9Y2U5 619 aa8.73□□□□□ -1.01
SHPRH-208ENST00000520752 ZNF175Q9Y473 711 aa8.73□□□□□ -1.01
SHPRH-208ENST00000520752 STON1Q9Y6Q2 735 aa8.73□□□□□ -1.01
SHPRH-208ENST00000520752 TIAM2Q8IVF5 1701 aa8.73□□□□□ -1.01
SHPRH-208ENST00000520752 NALCNQ8IZF0 1738 aa8.73□□□□□ -1.01
SHPRH-208ENST00000520752 TNKSO95271 1327 aa8.73□□□□□ -1.01
SHPRH-208ENST00000520752 SCN4AP35499 1836 aa8.73□□□□□ -1.01
SHPRH-208ENST00000520752 CCDC88AQ3V6T2 1871 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 LMO7Q8WWI1 1683 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 CHD4Q14839 1912 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 FMN2Q9NZ56 1722 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 A0A1W2PQ72 361 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 GSTTP1A0A1W2PQM5 241 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 GTPBP10A4D1E9 387 aaKnown RBP8.72□□□□□ -1.01
SHPRH-208ENST00000520752 WDR91A4D1P6 747 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 SAC3D1A6NKF1 404 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 ATP6V1G2-DDX39BF2Z307 99 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 TRDMT1O14717 391 aaKnown RBP8.72□□□□□ -1.01
SHPRH-208ENST00000520752 ATP2A1O14983 1001 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 ACSL4O60488 711 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 GAS7O60861 476 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 OR7A10O76100 309 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 NADKO95544 446 aaPredicted RBP8.72□□□□□ -1.01
SHPRH-208ENST00000520752 ERBB2P04626 1255 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 CEACAM5P06731 702 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 IFIT1P09914 478 aaKnown RBP8.72□□□□□ -1.01
SHPRH-208ENST00000520752 YBX3P16989 372 aaKnown RBP eCLIP8.72□□□□□ -1.01
SHPRH-208ENST00000520752 PROZP22891 400 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 MYF6P23409 242 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 PSMA3P25788 255 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 IVDP26440 423 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 HTR7P34969 479 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 GRK3P35626 688 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 DDOSTP39656 456 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 CPA2P48052 419 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 ITGA8P53708 1063 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 AP1S2P56377 157 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 EIF4A1P60842 406 aaKnown RBP8.72□□□□□ -1.01
SHPRH-208ENST00000520752 ASIC1P78348 528 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 KDSRQ06136 332 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 TNK2Q07912 1038 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 SP140Q13342 867 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 PPIL2Q13356 520 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 IKZF1Q13422 519 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 PKN2Q16513 984 aaKnown RBP8.72□□□□□ -1.01
SHPRH-208ENST00000520752 CCDC142Q17RM4 750 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 TYSND1Q2T9J0 566 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 CEP55Q53EZ4 464 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 YIF1BQ5BJH7 314 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 FGD3Q5JSP0 725 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.72□□□□□ -1.01
SHPRH-208ENST00000520752 UBAP2Q5T6F2 1119 aaKnown RBP8.72□□□□□ -1.01
SHPRH-208ENST00000520752 C16orf89Q6UX73 402 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 RANBP10Q6VN20 620 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 TOM1L2Q6ZVM7 507 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 C11orf96Q7Z7L8 435 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 CRLF3Q8IUI8 442 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 CCDC60Q8IWA6 550 aaPredicted RBP8.72□□□□□ -1.01
SHPRH-208ENST00000520752 CTAGE3PQ8IX95 158 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 SPACA3Q8IXA5 215 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 FAM178BQ8IXR5 827 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 C12orf56Q8IXR9 622 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 PALM2Q8IXS6 379 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 ZCCHC7Q8N3Z6 543 aaKnown RBP8.72□□□□□ -1.01
SHPRH-208ENST00000520752 C4orf32Q8N8J7 132 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 BANPQ8N9N5 519 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 ABHD11Q8NFV4 315 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 OR13F1Q8NGS4 319 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 SLC35G2Q8TBE7 412 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 NETO1Q8TDF5 533 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 TGFBRAP1Q8WUH2 860 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 SGK3Q96BR1 496 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 DUS3LQ96G46 650 aaKnown RBP8.72□□□□□ -1.01
SHPRH-208ENST00000520752 BTN2A3PQ96KV6 586 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 LBHD1Q9BQE6 289 aaPredicted RBP8.72□□□□□ -1.01
SHPRH-208ENST00000520752 RTKNQ9BST9 563 aa8.72□□□□□ -1.01
SHPRH-208ENST00000520752 TARS2Q9BW92 718 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms